BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00005370
         (2143 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020092846.1| uncharacterized protein LOC109713256 [Ananas...   472   0.0  
ref|XP_019163484.1| PREDICTED: uncharacterized protein LOC109159...   445   0.0  
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]        442   0.0  
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e...   454   0.0  
gb|PNX92532.1| retrotransposon-related protein [Trifolium pratense]   425   0.0  
ref|XP_010491426.2| PREDICTED: uncharacterized protein LOC104769...   433   0.0  
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]   425   0.0  
gb|PNX92994.1| Ty3/gypsy retrotransposon protein [Trifolium prat...   425   0.0  
gb|PNY00055.1| Ty3/gypsy retrotransposon protein [Trifolium prat...   425   0.0  
dbj|GAU25735.1| hypothetical protein TSUD_216660 [Trifolium subt...   410   0.0  
gb|AAP53789.1| retrotransposon protein, putative, unclassified [...   444   0.0  
gb|PKA61698.1| putative mitochondrial protein [Apostasia shenzhe...   417   0.0  
ref|XP_023156358.1| uncharacterized protein LOC111589729 isoform...   426   0.0  
gb|PNX92911.1| Ty3/gypsy retrotransposon protein [Trifolium prat...   420   0.0  
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]     424   0.0  
dbj|GAU27517.1| hypothetical protein TSUD_147110 [Trifolium subt...   407   0.0  
gb|PNY17729.1| retrotransposon-related protein [Trifolium pratense]   417   0.0  
dbj|BAF19594.2| Os06g0493000 [Oryza sativa Japonica Group]            427   0.0  
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   420   0.0  
gb|PKA46982.1| putative mitochondrial protein [Apostasia shenzhe...   423   0.0  

>ref|XP_020092846.1| uncharacterized protein LOC109713256 [Ananas comosus]
          Length = 1811

 Score =  472 bits (1214), Expect(2) = 0.0
 Identities = 212/359 (59%), Positives = 277/359 (77%)
 Frame = -1

Query: 1120 GRLGIGNDSQLRELILSEMHNFPTGGHSGINGTYMRLKGIFYWPGMKEDVMSWVKSCDVC 941
            G+L IG    LRE ++ +MHN   GGHSGI  TY R+K  FYWPG+K++V  WVK C  C
Sbjct: 1301 GKLYIGKSGHLREKVIDQMHNSALGGHSGIQNTYRRIKQHFYWPGLKKEVEEWVKGCATC 1360

Query: 940  ARNKPDSGPYPGLLQPLPIPSQAWTHISMDFIEGLPNSGGKNVILVIVDRFTKYAHFLAL 761
            A+NK D  P+ GLLQPLPIP Q W  +SMDFIE LP S GK+ I+V+VDR TKYAHF++L
Sbjct: 1361 AQNKVDGTPHAGLLQPLPIPHQVWEEVSMDFIEALPKSEGKDAIMVVVDRLTKYAHFVSL 1420

Query: 760  SHPFTAQGVAKLFLDTIYRLHGQPLSIVTDRDKVFTSSFWKELFKLMGTKLDMSSAYHPQ 581
             HPF+A  VA+ F+DTIY+LHG P  IV+DRDK+FTS FWKELF+ MGTKL MSSAYHP+
Sbjct: 1421 KHPFSAPVVARTFMDTIYKLHGCPKRIVSDRDKIFTSQFWKELFQSMGTKLQMSSAYHPE 1480

Query: 580  SDGQTERLNQCLENYLRCMIHTTPKKWLQWLPLAEFWYNTNYHTSMKLTPFQALYGYAPP 401
            +DGQTER+N+CLE YLRC+    PKKW  WL LAE+WYNT++H+S+ +TP++ALYGY PP
Sbjct: 1481 TDGQTERVNRCLETYLRCLCFQHPKKWHSWLALAEWWYNTSFHSSIGMTPYEALYGYPPP 1540

Query: 400  LHFMGAYLDSTNEEAKDTLRERQLIIETLRGNLLHAQNRMKVYADRHRQKREFEVGEFVY 221
             + + +   ST+ E ++  +ER+ +   LR  L  A++RMK   DRHR+++E+ +G++VY
Sbjct: 1541 NYLVTSITSSTSPEFREWAKEREGLTHELRDRLQVARSRMKQQVDRHRKEKEYAIGDWVY 1600

Query: 220  LKLQPFRQNSVEFRKNLKFESKYYGPYLILEKVGKVAYKLELPEGSRIHPVFHVSLLKK 44
            LKLQP+RQ +V  R+NLK  ++YYGP+ I+E++G VAYKL+LPEGSR+HPVFHVSLLKK
Sbjct: 1601 LKLQPYRQTTVAIRRNLKLAARYYGPFQIMERIGPVAYKLQLPEGSRVHPVFHVSLLKK 1659



 Score =  367 bits (941), Expect(2) = 0.0
 Identities = 181/333 (54%), Positives = 231/333 (69%)
 Frame = -3

Query: 2132 IVQCPCYFPVTNESSFQRVSKEICIGVFDDILVYSPTWEXXXXXXXXXXXXLRENQLYSK 1953
            +   P  F      +F+   ++  +  FDDILVYS + E            LR NQLY+K
Sbjct: 958  LTNAPATFQAIMNCTFEPYLRKFILVFFDDILVYSKSLEDHVKHLRITLEELRRNQLYAK 1017

Query: 1952 RSKCQFGQAQV*YLGHIISKEGVVTDPNKISCMTQWPTPTTVKQLRGFLGLTGYYRKFVK 1773
            RSKC FGQ QV YLGHIIS EGV TDP KI  M  WPTP +VK+LRGFLGLTGYYRKF++
Sbjct: 1018 RSKCYFGQDQVEYLGHIISAEGVATDPTKIEAMINWPTPKSVKELRGFLGLTGYYRKFIQ 1077

Query: 1772 DYGLLSRPLTNLLKKDSFQWTQEADDAFRELKTTMCSSPVLALPDFSKPFILETDASGTG 1593
             YG +S+PLT+LL+KD F W++E+  AF ELKT M ++PVLA+P+F + F LE DA  TG
Sbjct: 1078 GYGKISKPLTDLLRKDQFCWSEESQLAFEELKTAMTTAPVLAMPNFDRSFTLEVDACDTG 1137

Query: 1592 VGAVLMQQGRPIAFMSKVLCPKNQALSIYEREFLAVLMAIQKWRHYLQGHKFIIRTDQQS 1413
            +GAVL Q  +PIA++SK +  K+  LS YE+EFLA+LMA+QKW+HYL    F+IRTD +S
Sbjct: 1138 IGAVLSQDEKPIAYLSKAIGGKHLGLSTYEKEFLAILMALQKWKHYLSMRTFVIRTDHES 1197

Query: 1412 LKYLLDQRISTPMQQKWMTKLLGLDYEIEYKRGTENRAADALSRREGEDPLCIAITTVMP 1233
            LKYLL+QR++TPMQQK M KL+G DY I+Y++G EN AADALSR  GE  + +AIT  +P
Sbjct: 1198 LKYLLEQRVTTPMQQKGMMKLMGFDYTIQYRKGKENAAADALSRVTGEKGVTLAITAAIP 1257

Query: 1232 SWVQQVMQSYNQDPYFSNIIASKTLDPTTFPDF 1134
            SWVQ+V +SY  DP    +I    L  T   D+
Sbjct: 1258 SWVQEVTESYLGDPQCEKLICELPLQSTNQGDY 1290


>ref|XP_019163484.1| PREDICTED: uncharacterized protein LOC109159828 [Ipomoea nil]
          Length = 1873

 Score =  445 bits (1145), Expect(2) = 0.0
 Identities = 212/363 (58%), Positives = 271/363 (74%)
 Frame = -1

Query: 1120 GRLGIGNDSQLRELILSEMHNFPTGGHSGINGTYMRLKGIFYWPGMKEDVMSWVKSCDVC 941
            GRL IG++  LR+ ++ ++H    GGHSG  GTY R+K +FYW G+K DV+  V++CD C
Sbjct: 1096 GRLYIGSNGTLRKELMLKLHESAIGGHSGQTGTYQRMKALFYWKGLKRDVIELVRTCDTC 1155

Query: 940  ARNKPDSGPYPGLLQPLPIPSQAWTHISMDFIEGLPNSGGKNVILVIVDRFTKYAHFLAL 761
             R K ++   PGLLQPL IP +AW  ISMDFIEGLP S  KNVILV+VDR TKYAHF+A+
Sbjct: 1156 QRCKHENVANPGLLQPLNIPEEAWQSISMDFIEGLPLSKQKNVILVVVDRLTKYAHFIAV 1215

Query: 760  SHPFTAQGVAKLFLDTIYRLHGQPLSIVTDRDKVFTSSFWKELFKLMGTKLDMSSAYHPQ 581
            SHP+TA+ +A LF++ IYRLHG P SI++DRDKVFTS FW+ LFK M  +L++S+AYHPQ
Sbjct: 1216 SHPYTAEIIANLFMENIYRLHGLPRSIISDRDKVFTSRFWQALFKNMQVQLNLSTAYHPQ 1275

Query: 580  SDGQTERLNQCLENYLRCMIHTTPKKWLQWLPLAEFWYNTNYHTSMKLTPFQALYGYAPP 401
            +DGQTER+NQCLE+YLRCM    P  W +WL LAE+WYNTNYH+++K TPFQALYGY PP
Sbjct: 1276 TDGQTERVNQCLESYLRCMAFQKPASWGKWLHLAEWWYNTNYHSALKCTPFQALYGYTPP 1335

Query: 400  LHFMGAYLDSTNEEAKDTLRERQLIIETLRGNLLHAQNRMKVYADRHRQKREFEVGEFVY 221
                 A      ++    L ER  ++ TL+ NL  A NRMKV AD+ R +R   VG++VY
Sbjct: 1336 ALVCNAI---HKDDESSWLIERNAVLATLKENLKQAHNRMKVQADKGRSERILMVGDWVY 1392

Query: 220  LKLQPFRQNSVEFRKNLKFESKYYGPYLILEKVGKVAYKLELPEGSRIHPVFHVSLLKKC 41
            LK+QP+RQ S+  R NLK  SKYYGPY ++EKVG VAYKL+LP G+++HPVFHVS LKK 
Sbjct: 1393 LKVQPYRQVSLAVRSNLKLASKYYGPYKVIEKVGAVAYKLQLPAGAQLHPVFHVSQLKKR 1452

Query: 40   LGQ 32
            +G+
Sbjct: 1453 VGE 1455



 Score =  347 bits (890), Expect(2) = 0.0
 Identities = 165/329 (50%), Positives = 230/329 (69%), Gaps = 1/329 (0%)
 Frame = -3

Query: 2132 IVQCPCYFPVTNESSFQRVSKEICIGVFDDILVYSPTWEXXXXXXXXXXXXLRENQLYSK 1953
            +   P  F     S F+ + ++  +  FDDILVYSP+WE            +R++QL +K
Sbjct: 753  LTNAPATFQALMNSVFKPLLRKFVLVFFDDILVYSPSWEVHWQHLREVLLTMRQHQLLAK 812

Query: 1952 RSKCQFGQAQV*YLGHIISKEGVVTDPNKISCMTQWPTPTTVKQLRGFLGLTGYYRKFVK 1773
             SKC F Q QV YLGHIIS+EG+ TDP K+  +  WP P TVK LRGFLGLTGYYR+F++
Sbjct: 813  MSKCSFAQTQVEYLGHIISQEGLQTDPTKLEAVAAWPRPKTVKALRGFLGLTGYYRRFIR 872

Query: 1772 DYGLLSRPLTNLLKKDSFQWTQEADDAFRELKTTMCSSPVLALPDFSKPFILETDASGTG 1593
             YG+LS+PLT +LK D F+W  ++D AF +LK+ +C+SPVLALP+F K FI+E DAS  G
Sbjct: 873  AYGVLSKPLTEMLKNDGFKWGPKSDQAFEQLKSALCNSPVLALPNFQKDFIVEADASHKG 932

Query: 1592 VGAVLMQQGRPIAFMSKVLCPKNQALSIYEREFLAVLMAIQKWRHYLQGHKFIIRTDQQS 1413
            +GAVL+Q+G+PIAF SK    K+  LSIYE+E+L+++  + +WR YL    F I+TD  S
Sbjct: 933  MGAVLVQEGKPIAFFSKAFGEKHLGLSIYEKEYLSIINVVDRWRPYLLERHFAIKTDHHS 992

Query: 1412 LKYLLDQRISTPMQQKWMTKLLGLDYEIEYKRGTENRAADALSRRE-GEDPLCIAITTVM 1236
            L++LL+Q+I+T +QQK ++KLLGLDY I+YKRG +N+ ADALSRR+  E P+  AI+ V 
Sbjct: 993  LQFLLEQKITTALQQKGLSKLLGLDYSIQYKRGADNQVADALSRRDYDEGPVLNAISVVQ 1052

Query: 1235 PSWVQQVMQSYNQDPYFSNIIASKTLDPT 1149
            P W+++V+ SY  D + S  + +  +DPT
Sbjct: 1053 PQWLEEVLNSYTGDTWASTNLTAALIDPT 1081


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score =  442 bits (1137), Expect(3) = 0.0
 Identities = 199/373 (53%), Positives = 277/373 (74%)
 Frame = -1

Query: 1120 GRLGIGNDSQLRELILSEMHNFPTGGHSGINGTYMRLKGIFYWPGMKEDVMSWVKSCDVC 941
            GR+ +G ++++RE ++   H+   GGHSG+  TY R+K +FYWPG+K+ V  +++ C +C
Sbjct: 1155 GRIYVGENTEIREELIRSYHSSAFGGHSGMRATYHRIKSLFYWPGLKKAVEGFIRECPIC 1214

Query: 940  ARNKPDSGPYPGLLQPLPIPSQAWTHISMDFIEGLPNSGGKNVILVIVDRFTKYAHFLAL 761
               K +    PGLL PL +P  AW HI+MDF+EGLP S GK+VILV+VDR TKYAHF+A+
Sbjct: 1215 QVTKAEHIHIPGLLDPLEVPDMAWAHITMDFVEGLPKSNGKDVILVVVDRLTKYAHFIAM 1274

Query: 760  SHPFTAQGVAKLFLDTIYRLHGQPLSIVTDRDKVFTSSFWKELFKLMGTKLDMSSAYHPQ 581
            +HP+T + V +LF++ I+RLHG P++I+TDRD++FTS  ++E+FK M  +L  S++YHPQ
Sbjct: 1275 AHPYTVEQVVELFMNNIHRLHGMPMAIITDRDRIFTSQLFQEIFKSMKVRLKFSTSYHPQ 1334

Query: 580  SDGQTERLNQCLENYLRCMIHTTPKKWLQWLPLAEFWYNTNYHTSMKLTPFQALYGYAPP 401
            +DGQTER+NQCLE+YLR M    P +W  WL LAE+WYNT YHTS+++TPFQALYGY PP
Sbjct: 1335 TDGQTERVNQCLESYLRSMTFQEPTRWHSWLALAEWWYNTTYHTSIQMTPFQALYGYPPP 1394

Query: 400  LHFMGAYLDSTNEEAKDTLRERQLIIETLRGNLLHAQNRMKVYADRHRQKREFEVGEFVY 221
                 +   + +EEA+ T+ ++  II+ L+ +L  AQ R+K YADR+R +R   VG+ VY
Sbjct: 1395 QINEFSVPCNVSEEARVTIEQKDAIIQKLKYSLTEAQRRIKHYADRNRSERTLAVGDMVY 1454

Query: 220  LKLQPFRQNSVEFRKNLKFESKYYGPYLILEKVGKVAYKLELPEGSRIHPVFHVSLLKKC 41
            LKLQP+RQ +   R +LK  SK+YGP+ I+EKVG+VAYKL+LPEGS IHPVFHVS LKK 
Sbjct: 1455 LKLQPYRQTAFGIRGSLKLRSKFYGPFKIMEKVGRVAYKLQLPEGSNIHPVFHVSQLKKH 1514

Query: 40   LGQKHLPSSELPS 2
            +G + +P + LPS
Sbjct: 1515 IGSRAVPMANLPS 1527



 Score =  315 bits (807), Expect(3) = 0.0
 Identities = 154/294 (52%), Positives = 204/294 (69%)
 Frame = -3

Query: 2051 FDDILVYSPTWEXXXXXXXXXXXXLRENQLYSKRSKCQFGQAQV*YLGHIISKEGVVTDP 1872
            FDDIL+YS  W             L EN+L  K  KC FG   V YLGHIIS++GV TDP
Sbjct: 840  FDDILIYSKDWAEHKEHIRQVMKVLEENKLVVKLKKCAFGLPSVTYLGHIISQDGVATDP 899

Query: 1871 NKISCMTQWPTPTTVKQLRGFLGLTGYYRKFVKDYGLLSRPLTNLLKKDSFQWTQEADDA 1692
             K+  +  +PTP +V  LR FLG+TGYYR+F+K+YG++ RPL ++LKK+ FQW +E  +A
Sbjct: 900  KKVEKIATYPTPKSVTDLRKFLGMTGYYRRFIKNYGIVCRPLHDMLKKEGFQWEREQTEA 959

Query: 1691 FRELKTTMCSSPVLALPDFSKPFILETDASGTGVGAVLMQQGRPIAFMSKVLCPKNQALS 1512
            F  LKT MC+SPVL+LPDF+K F++E DA G G+GAVLMQ GRP+A+ SK L PK  A S
Sbjct: 960  FETLKTHMCTSPVLSLPDFTKEFVIEADACGNGIGAVLMQSGRPLAYFSKTLGPKAAAQS 1019

Query: 1511 IYEREFLAVLMAIQKWRHYLQGHKFIIRTDQQSLKYLLDQRISTPMQQKWMTKLLGLDYE 1332
            IYE+E +A+L A++KWRHY+ G + II+TDQQSLK++++QR+   +Q K + KL+  DY 
Sbjct: 1020 IYEKEAMAILEALKKWRHYVLGSRLIIKTDQQSLKFMMNQRLVEGIQHKLLLKLMEYDYS 1079

Query: 1331 IEYKRGTENRAADALSRREGEDPLCIAITTVMPSWVQQVMQSYNQDPYFSNIIA 1170
            IEYK G EN  ADALSR    +  C AITTV+P WV+ + +SY  D     I++
Sbjct: 1080 IEYKAGKENLVADALSRIPPAEQ-CQAITTVIPEWVRDIQRSYEGDVQAHKILS 1132



 Score = 52.8 bits (125), Expect(3) = 0.0
 Identities = 26/38 (68%), Positives = 30/38 (78%), Gaps = 3/38 (7%)
 Frame = -1

Query: 2143 MPFGLCNAPATFQSLMNQVFREYLRKFVLVF---LMIY 2039
            MPFGL NAP TFQSLMNQV   +LRK+VLVF   ++IY
Sbjct: 809  MPFGLTNAPTTFQSLMNQVLAPFLRKYVLVFFDDILIY 846


>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1348

 Score =  454 bits (1167), Expect(2) = 0.0
 Identities = 208/372 (55%), Positives = 278/372 (74%)
 Frame = -1

Query: 1120 GRLGIGNDSQLRELILSEMHNFPTGGHSGINGTYMRLKGIFYWPGMKEDVMSWVKSCDVC 941
            GR+ +G D +LR  I+  +H    GGHSG   TY R+K +FYWPGMK+++ + V+ C VC
Sbjct: 905  GRIYVGKDPELRLNIIHSLHMSAVGGHSGRVATYQRVKHLFYWPGMKKEIHTMVRECAVC 964

Query: 940  ARNKPDSGPYPGLLQPLPIPSQAWTHISMDFIEGLPNSGGKNVILVIVDRFTKYAHFLAL 761
             R+K +   YPGLL+PLPIP  AWTHISMDFIEGLP+S GK VI V+VDRFTKYAH + L
Sbjct: 965  QRSKAEHCHYPGLLEPLPIPDMAWTHISMDFIEGLPSSKGKEVIFVVVDRFTKYAHSVPL 1024

Query: 760  SHPFTAQGVAKLFLDTIYRLHGQPLSIVTDRDKVFTSSFWKELFKLMGTKLDMSSAYHPQ 581
            SHP++ Q VA+ F+D I++LHG P++IV+DRD++FTS  W+ELFK M  +L  S+AYHPQ
Sbjct: 1025 SHPYSVQLVAQAFIDNIFKLHGFPIAIVSDRDRIFTSKLWQELFKSMKVQLRFSTAYHPQ 1084

Query: 580  SDGQTERLNQCLENYLRCMIHTTPKKWLQWLPLAEFWYNTNYHTSMKLTPFQALYGYAPP 401
            +DGQTER+NQC+E+YLRCM    PKKW+ WLPLAE+WYNT +HT++KL+PFQALYG+ PP
Sbjct: 1085 TDGQTERVNQCVESYLRCMAMQEPKKWVSWLPLAEWWYNTTFHTALKLSPFQALYGFPPP 1144

Query: 400  LHFMGAYLDSTNEEAKDTLRERQLIIETLRGNLLHAQNRMKVYADRHRQKREFEVGEFVY 221
            L    A     + EA+D L E+Q+++  L+ NL  AQ RMK YAD +R +R+  VG+ VY
Sbjct: 1145 LINEVAIPGPEDNEARDFLEEKQVMLRRLKENLAQAQTRMKKYADLNRSERQLTVGDMVY 1204

Query: 220  LKLQPFRQNSVEFRKNLKFESKYYGPYLILEKVGKVAYKLELPEGSRIHPVFHVSLLKKC 41
            LK+QP+R  +   ++ LK  S +YGP+ ++++VGKVAY+L+LPEG  IHPVFH+S LK+ 
Sbjct: 1205 LKMQPYRTTAFGLKQALKLTSIFYGPFRVMQRVGKVAYRLQLPEGVGIHPVFHISQLKQH 1264

Query: 40   LGQKHLPSSELP 5
             G   +PS ELP
Sbjct: 1265 CGANSIPSPELP 1276



 Score =  312 bits (799), Expect(2) = 0.0
 Identities = 154/338 (45%), Positives = 218/338 (64%)
 Frame = -3

Query: 2132 IVQCPCYFPVTNESSFQRVSKEICIGVFDDILVYSPTWEXXXXXXXXXXXXLRENQLYSK 1953
            +   P  F     S F +  +   +  FDDIL+YS   E            LR++QL++K
Sbjct: 565  LTNAPATFQCLMNSIFAQYLRRFILVFFDDILIYSKNDEEHQEHLTIVLGLLRQHQLFAK 624

Query: 1952 RSKCQFGQAQV*YLGHIISKEGVVTDPNKISCMTQWPTPTTVKQLRGFLGLTGYYRKFVK 1773
             +KC F  +QV YLGH+IS +GV TDP+KIS + +WP P  + QLR FLG+TGYYR+F++
Sbjct: 625  LNKCVFAVSQVTYLGHVISGDGVATDPDKISTIVEWPKPQDLTQLRSFLGMTGYYRRFIR 684

Query: 1772 DYGLLSRPLTNLLKKDSFQWTQEADDAFRELKTTMCSSPVLALPDFSKPFILETDASGTG 1593
             YG++ RPL ++L+K  F W    D+AF +LK  M ++PVLALPDFS+ F LETDASGTG
Sbjct: 685  HYGVICRPLYDMLRKGGFDWKDPQDEAFVKLKLAMTTAPVLALPDFSENFTLETDASGTG 744

Query: 1592 VGAVLMQQGRPIAFMSKVLCPKNQALSIYEREFLAVLMAIQKWRHYLQGHKFIIRTDQQS 1413
            +G VLMQ+GRP+A+ S+ L  +  A+S Y+RE LA++ ++++WRHY  G + IIRTDQQS
Sbjct: 745  IGGVLMQRGRPLAYFSRTLGVRAAAMSTYDREALAIIESLKRWRHYFLGTQLIIRTDQQS 804

Query: 1412 LKYLLDQRISTPMQQKWMTKLLGLDYEIEYKRGTENRAADALSRREGEDPLCIAITTVMP 1233
            LK++ DQ+++  +Q K M +LL  DY IEYK+G EN+ ADALSRR       +AI+  +P
Sbjct: 805  LKFMTDQKVAEGIQHKLMLRLLEFDYTIEYKKGKENKVADALSRRGNS---VMAISIAVP 861

Query: 1232 SWVQQVMQSYNQDPYFSNIIASKTLDPTTFPDFDIT*G 1119
            SW++ V  SY  D     ++   TL P     + +  G
Sbjct: 862  SWIEAVTNSYQNDANCKELMEQLTLAPNADSGYTLNAG 899


>gb|PNX92532.1| retrotransposon-related protein [Trifolium pratense]
          Length = 1472

 Score =  425 bits (1092), Expect(2) = 0.0
 Identities = 201/373 (53%), Positives = 261/373 (69%)
 Frame = -1

Query: 1120 GRLGIGNDSQLRELILSEMHNFPTGGHSGINGTYMRLKGIFYWPGMKEDVMSWVKSCDVC 941
            G+L IG+D  ++E IL  +H+   GGHSG + T  R+K +FYW GM +D++ +VK+C VC
Sbjct: 1043 GKLVIGSDPAVKESILHWLHDSALGGHSGRDVTATRIKSLFYWKGMTKDILHYVKNCGVC 1102

Query: 940  ARNKPDSGPYPGLLQPLPIPSQAWTHISMDFIEGLPNSGGKNVILVIVDRFTKYAHFLAL 761
             RNKPD   YPGLLQPLPIP+Q WT ISMDFIEGLP S GK VI V+VDR +KYAHF+AL
Sbjct: 1103 QRNKPDLAAYPGLLQPLPIPTQIWTAISMDFIEGLPTSAGKQVIFVVVDRLSKYAHFMAL 1162

Query: 760  SHPFTAQGVAKLFLDTIYRLHGQPLSIVTDRDKVFTSSFWKELFKLMGTKLDMSSAYHPQ 581
            SHP+TA  VA+LFLD +++LHG P +I +DRD +F S+FW E FKL G  L  S+AYHPQ
Sbjct: 1163 SHPYTALDVAQLFLDNVFKLHGMPETITSDRDXIFLSTFWHEFFKLQGVALHKSTAYHPQ 1222

Query: 580  SDGQTERLNQCLENYLRCMIHTTPKKWLQWLPLAEFWYNTNYHTSMKLTPFQALYGYAPP 401
            SDGQTE +N+CLE YLRCM  + P  W +WL LAE+WYNTNYH+S+  TPF+ +YG  PP
Sbjct: 1223 SDGQTEIVNKCLETYLRCMCSSRPTNWFKWLSLAEWWYNTNYHSSIHTTPFEVVYGQPPP 1282

Query: 400  LHFMGAYLDSTNEEAKDTLRERQLIIETLRGNLLHAQNRMKVYADRHRQKREFEVGEFVY 221
            +H       S +     +L  R   I+ L+ +LL AQNRM   A++HR  R F +G++VY
Sbjct: 1283 IHLPYLPGSSPSFSVDRSLIARDEAIKLLKFHLLRAQNRMSQQANKHRSDRVFSIGDYVY 1342

Query: 220  LKLQPFRQNSVEFRKNLKFESKYYGPYLILEKVGKVAYKLELPEGSRIHPVFHVSLLKKC 41
            LKLQP+RQ S++     K   K+YGP+ +L+++G  AY+LELP  + IH VFHVS LK C
Sbjct: 1343 LKLQPYRQLSMKKHGYNKLLPKFYGPFKVLDRIGGAAYQLELPPSAAIHNVFHVSQLKLC 1402

Query: 40   LGQKHLPSSELPS 2
               +  P   LPS
Sbjct: 1403 PNPQAQPIQHLPS 1415



 Score =  337 bits (864), Expect(2) = 0.0
 Identities = 164/340 (48%), Positives = 224/340 (65%)
 Frame = -3

Query: 2132 IVQCPCYFPVTNESSFQRVSKEICIGVFDDILVYSPTWEXXXXXXXXXXXXLRENQLYSK 1953
            +   P  F       FQ   ++  I  FDD+L+YS + E            +R N L+  
Sbjct: 700  LTNAPASFQSLMNQVFQPFLRKFVIIFFDDLLIYSQSIEDHLVHLRLIFHTIRANHLFLN 759

Query: 1952 RSKCQFGQAQV*YLGHIISKEGVVTDPNKISCMTQWPTPTTVKQLRGFLGLTGYYRKFVK 1773
             SKC F   +V YLGH I+KEGV TDP KI  ++ WP P  VKQLRGFLGL GYYR+FV+
Sbjct: 760  XSKCSFALPKVEYLGHFITKEGVSTDPAKIQAVSSWPIPQNVKQLRGFLGLAGYYRRFVQ 819

Query: 1772 DYGLLSRPLTNLLKKDSFQWTQEADDAFRELKTTMCSSPVLALPDFSKPFILETDASGTG 1593
            D+G L++PLT+LLKK+ F WT  A  AF +LK  + ++PVL+LP+FSK F++ETDASG G
Sbjct: 820  DFGKLAKPLTDLLKKEGFVWTDNATQAFMQLKQALITAPVLSLPNFSKQFVVETDASGKG 879

Query: 1592 VGAVLMQQGRPIAFMSKVLCPKNQALSIYEREFLAVLMAIQKWRHYLQGHKFIIRTDQQS 1413
            +GAVLMQ+  P+A++SK L PK QA+S+YERE LA++ A+QKW  YL    F+IRTDQ+S
Sbjct: 880  IGAVLMQEQHPVAYISKSLGPKQQAMSVYERELLAIVYAVQKWGSYLSHAPFVIRTDQKS 939

Query: 1412 LKYLLDQRISTPMQQKWMTKLLGLDYEIEYKRGTENRAADALSRREGEDPLCIAITTVMP 1233
            +K++LDQ+++TP QQ W+ KLLG D+EI YK G+ N AADALSR+ G + L + +    P
Sbjct: 940  IKHMLDQKLNTPFQQVWVAKLLGFDFEIHYKEGSSNLAADALSRKTGAELLPLFLDNAAP 999

Query: 1232 SWVQQVMQSYNQDPYFSNIIASKTLDPTTFPDFDIT*GQI 1113
              +  +  S+ QDP+F  II     +P + P F  T G++
Sbjct: 1000 DLLTSITASWQQDPHFKAIILDLQSNPQSHPKFSWTRGEL 1039


>ref|XP_010491426.2| PREDICTED: uncharacterized protein LOC104769009 [Camelina sativa]
          Length = 1585

 Score =  433 bits (1113), Expect(2) = 0.0
 Identities = 205/372 (55%), Positives = 271/372 (72%)
 Frame = -1

Query: 1117 RLGIGNDSQLRELILSEMHNFPTGGHSGINGTYMRLKGIFYWPGMKEDVMSWVKSCDVCA 938
            ++ + N+ QLR+ IL  MH   TGGH G + TY ++KG+FYW GM  D+  +++SC VC 
Sbjct: 1145 KIVVPNNIQLRDSILQWMHCSGTGGHLGRDATYQKVKGLFYWKGMAVDIQKYIRSCAVCQ 1204

Query: 937  RNKPDSGPYPGLLQPLPIPSQAWTHISMDFIEGLPNSGGKNVILVIVDRFTKYAHFLALS 758
            + K D+  YPGLLQPLPIP   WT +SMDFI+GLP+S GK VI V+VDR TK AHF+AL+
Sbjct: 1205 QCKYDTSAYPGLLQPLPIPETIWTDLSMDFIDGLPDSAGKTVIFVVVDRLTKAAHFMALA 1264

Query: 757  HPFTAQGVAKLFLDTIYRLHGQPLSIVTDRDKVFTSSFWKELFKLMGTKLDMSSAYHPQS 578
            HP++A  VA+ F+DT+++LHG P SIV+DRD +F S+FW+ELF L G  L  SSAYHPQS
Sbjct: 1265 HPYSAVTVAQAFMDTVFKLHGCPRSIVSDRDTIFVSTFWRELFTLQGVDLKFSSAYHPQS 1324

Query: 577  DGQTERLNQCLENYLRCMIHTTPKKWLQWLPLAEFWYNTNYHTSMKLTPFQALYGYAPPL 398
            DGQTE +N+CLE YLRCM    P  W  WLPLAEFWYNTN+HT+ +++PF+A+YG +PP+
Sbjct: 1325 DGQTEVVNRCLETYLRCMCSDKPHLWSSWLPLAEFWYNTNFHTATQMSPFEAVYGQSPPV 1384

Query: 397  HFMGAYLDSTNEEAKDTLRERQLIIETLRGNLLHAQNRMKVYADRHRQKREFEVGEFVYL 218
            H      +S       +L+ER+ ++  L+ +LL AQ+RMK +AD HR  R FE+G+ V++
Sbjct: 1385 HLPYLPGESKVAVVARSLQERESMLLILKFHLLRAQHRMKQFADSHRTDRSFEIGDSVFV 1444

Query: 217  KLQPFRQNSVEFRKNLKFESKYYGPYLILEKVGKVAYKLELPEGSRIHPVFHVSLLKKCL 38
            K QP+RQ SV  R N K   KY+GPY I+++ GKVAYKL LP GS+IHPVFHVS LK  +
Sbjct: 1445 KHQPYRQGSVVVRSNQKLSPKYFGPYKIVDRCGKVAYKLLLPGGSQIHPVFHVSQLKAVV 1504

Query: 37   GQKHLPSSELPS 2
            GQ  L S++LPS
Sbjct: 1505 GQV-LTSTQLPS 1515



 Score =  323 bits (828), Expect(2) = 0.0
 Identities = 159/320 (49%), Positives = 218/320 (68%)
 Frame = -3

Query: 2132 IVQCPCYFPVTNESSFQRVSKEICIGVFDDILVYSPTWEXXXXXXXXXXXXLRENQLYSK 1953
            +   P  F     S F+   ++  +  FDDILVYS +              +RE++L++K
Sbjct: 801  LTNAPATFQGLMNSVFKEFLRKFVLIFFDDILVYSSSMTDHIVHLQKVFNTMREHKLFAK 860

Query: 1952 RSKCQFGQAQV*YLGHIISKEGVVTDPNKISCMTQWPTPTTVKQLRGFLGLTGYYRKFVK 1773
             SKC+F  AQV YLGH I+  GV TDP K++ +  WP P+ +KQLRGFLGL GYYR+FVK
Sbjct: 861  ESKCEFATAQVEYLGHYIAAGGVSTDPTKVNAVADWPLPSNLKQLRGFLGLAGYYRRFVK 920

Query: 1772 DYGLLSRPLTNLLKKDSFQWTQEADDAFRELKTTMCSSPVLALPDFSKPFILETDASGTG 1593
            ++G ++RPLT L KKD+F W+ EA +AF  LK  +C +PVLA P F KPF++ETDA   G
Sbjct: 921  NFGTIARPLTLLTKKDAFTWSVEASEAFTALKQALCEAPVLAFPRFDKPFLVETDACTKG 980

Query: 1592 VGAVLMQQGRPIAFMSKVLCPKNQALSIYEREFLAVLMAIQKWRHYLQGHKFIIRTDQQS 1413
            +GAVLMQ+G P+AF+S+ L  K   LSIYE+E LAV+ A+QKWRHYL  + FIIRTDQ+S
Sbjct: 981  IGAVLMQEGHPLAFISRHLKGKQLNLSIYEKELLAVVFAVQKWRHYLLPNHFIIRTDQRS 1040

Query: 1412 LKYLLDQRISTPMQQKWMTKLLGLDYEIEYKRGTENRAADALSRREGEDPLCIAITTVMP 1233
            LKYLL+QR++TP+QQ+W+ KLL  DYEI+Y++G +N AADALSR EG + L +A++ +  
Sbjct: 1041 LKYLLEQRLNTPIQQQWLPKLLEFDYEIQYRQGKDNIAADALSRVEGAEVLHMAMSVLEC 1100

Query: 1232 SWVQQVMQSYNQDPYFSNII 1173
              ++ +   Y  D     +I
Sbjct: 1101 DLLKDIQAHYATDAELKKLI 1120


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score =  425 bits (1093), Expect(2) = 0.0
 Identities = 204/372 (54%), Positives = 267/372 (71%)
 Frame = -1

Query: 1120 GRLGIGNDSQLRELILSEMHNFPTGGHSGINGTYMRLKGIFYWPGMKEDVMSWVKSCDVC 941
            GRL I    +LRE IL  +H+ P GGHSG + T  R K  FYW GM+++V  ++K CD+C
Sbjct: 1035 GRLYIPASKELREQILYLLHSSPQGGHSGFHKTLHRAKSEFYWEGMRKEVRRFIKECDIC 1094

Query: 940  ARNKPDSGPYPGLLQPLPIPSQAWTHISMDFIEGLPNSGGKNVILVIVDRFTKYAHFLAL 761
             +NK ++    GLLQPLPIP++ WT IS+DFIEGLPNS   +VI+V+VDR +KYAHF+ +
Sbjct: 1095 QQNKSENIHPAGLLQPLPIPTKVWTDISLDFIEGLPNSESYSVIMVVVDRLSKYAHFIPI 1154

Query: 760  SHPFTAQGVAKLFLDTIYRLHGQPLSIVTDRDKVFTSSFWKELFKLMGTKLDMSSAYHPQ 581
            SHP+TA  +A++FL  I++LHG P SIVTDRD  FTS+FWKELFKL GT L  SSAYHPQ
Sbjct: 1155 SHPYTASKIAQVFLANIFKLHGLPNSIVTDRDPTFTSTFWKELFKLQGTTLKFSSAYHPQ 1214

Query: 580  SDGQTERLNQCLENYLRCMIHTTPKKWLQWLPLAEFWYNTNYHTSMKLTPFQALYGYAPP 401
            +DGQTE +N+ +E YLRC     PK W++WLPLAE+WYNTN H S KL+PF+++YGY PP
Sbjct: 1215 TDGQTEIVNKMVEQYLRCFSGDKPKGWVKWLPLAEWWYNTNIHASTKLSPFESVYGYPPP 1274

Query: 400  LHFMGAYLDSTNEEAKDTLRERQLIIETLRGNLLHAQNRMKVYADRHRQKREFEVGEFVY 221
                     +  +E ++TL+ R  II  LR NL  AQ+RMK +AD     R F +G+ VY
Sbjct: 1275 KLIPYTPGTTQLQEVENTLKTRDEIIRILRTNLQLAQDRMKKFADIKXTARSFNIGDLVY 1334

Query: 220  LKLQPFRQNSVEFRKNLKFESKYYGPYLILEKVGKVAYKLELPEGSRIHPVFHVSLLKKC 41
            L+LQP++Q SV  R+NLK   ++YGPY +LEK+G VAY+LELP  ++IHPVFHVS LK+ 
Sbjct: 1335 LRLQPYKQQSVVQRRNLKLSPRFYGPYRVLEKIGTVAYRLELPPEAKIHPVFHVSCLKEK 1394

Query: 40   LGQKHLPSSELP 5
            LG++H     LP
Sbjct: 1395 LGERHQLVVTLP 1406



 Score =  327 bits (839), Expect(2) = 0.0
 Identities = 163/322 (50%), Positives = 223/322 (69%), Gaps = 2/322 (0%)
 Frame = -3

Query: 2132 IVQCPCYFPVTNESSFQRVSKEICIGVFDDILVYSPTWEXXXXXXXXXXXXLRENQLYSK 1953
            +   P  F       F+   ++  +  F DILVYS +              L+++QL++K
Sbjct: 690  LTNAPTTFQSLMNDIFKPYLRKFILVFFYDILVYSKSLADHVHHLQTVLDILKQHQLFAK 749

Query: 1952 RSKCQFGQAQV*YLGHIISKEGVVTDPNKISCMTQWPTPTTVKQLRGFLGLTGYYRKFVK 1773
            +SKC FG +++ YLGH+ISK+GV  DP KI  M  WP PT++K LRGFLGLTGYYRKF+K
Sbjct: 750  KSKCCFGCSEIEYLGHLISKDGVQADPTKIEAMLNWPFPTSLKSLRGFLGLTGYYRKFIK 809

Query: 1772 DYGLLSRPLTNLLKKDSFQWTQEADDAFRELKTTMCSSPVLALPDFSKPFILETDASGTG 1593
             YGL++ PLT LLKK+SF+WT+ A  AF++LK  + S PVLALPDFS PF ++ DASG G
Sbjct: 810  GYGLIAAPLTALLKKNSFKWTESAKRAFQDLKHDVTSPPVLALPDFSIPFTIQCDASGIG 869

Query: 1592 VGAVLMQQGRPIAFMSKVLCPKNQALSIYEREFLAVLMAIQKWRHYLQGHKFIIRTDQQS 1413
            VGAVLMQQGRP+A+MS+ +  K   LS YE+E +A+++A++KWR YL GH F I+TDQ S
Sbjct: 870  VGAVLMQQGRPLAYMSQAIHGKALQLSTYEKELMALVLAVKKWRSYLLGHNFKIQTDQXS 929

Query: 1412 LKYLLDQRISTPMQQKWMTKLLGLDYEIEYKRGTENRAADALSRR--EGEDPLCIAITTV 1239
            LKYLL+Q++ TP+QQKW+TKLLG ++ +EYK+G EN+ ADALSR+  + ++    AIT  
Sbjct: 930  LKYLLEQKMGTPLQQKWITKLLGYEFVVEYKQGKENKVADALSRKMEDQKEGKLYAITAP 989

Query: 1238 MPSWVQQVMQSYNQDPYFSNII 1173
              +W++Q+   Y  DP    II
Sbjct: 990  ANTWLEQLRTXYAIDPKLQQII 1011


>gb|PNX92994.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1476

 Score =  425 bits (1092), Expect(2) = 0.0
 Identities = 191/360 (53%), Positives = 263/360 (73%)
 Frame = -1

Query: 1120 GRLGIGNDSQLRELILSEMHNFPTGGHSGINGTYMRLKGIFYWPGMKEDVMSWVKSCDVC 941
            G+L +G+D  L   IL   H+ P GGHSG + T  R+K +F+W GM +D+  ++++CDVC
Sbjct: 1045 GKLVVGSDPTLHRFILKWFHDSPAGGHSGRDVTAARIKSLFFWKGMTKDIQQYIRNCDVC 1104

Query: 940  ARNKPDSGPYPGLLQPLPIPSQAWTHISMDFIEGLPNSGGKNVILVIVDRFTKYAHFLAL 761
             R KP+  P PGLLQPLPIP + W  IS+DFIEGLP+S GK VI V+VDR +KYAHF+AL
Sbjct: 1105 QRCKPEQIPSPGLLQPLPIPDKIWDAISLDFIEGLPSSMGKQVIFVVVDRLSKYAHFMAL 1164

Query: 760  SHPFTAQGVAKLFLDTIYRLHGQPLSIVTDRDKVFTSSFWKELFKLMGTKLDMSSAYHPQ 581
            SHPFTA  VA+LFLD +++LHG P +I +DRD +F S  W +LF+L G  L+ S+AYHPQ
Sbjct: 1165 SHPFTALDVAQLFLDNVFKLHGLPSTITSDRDPIFLSKLWNDLFQLQGVYLNKSTAYHPQ 1224

Query: 580  SDGQTERLNQCLENYLRCMIHTTPKKWLQWLPLAEFWYNTNYHTSMKLTPFQALYGYAPP 401
            +DGQTE +N+CLE YLRCM    P  W++WL LAE+WYNTN+H+S++ TPF+ +YG  PP
Sbjct: 1225 TDGQTEIVNKCLETYLRCMCADKPSSWIKWLSLAEWWYNTNFHSSIQTTPFEVVYGQTPP 1284

Query: 400  LHFMGAYLDSTNEEAKDTLRERQLIIETLRGNLLHAQNRMKVYADRHRQKREFEVGEFVY 221
            LH      +S++ +   TL  R+  I+ L+ +L+ AQNRM  +AD+HR  R F +G+FVY
Sbjct: 1285 LHLPYLPGESSSLQVDRTLHARETAIQMLKFHLMRAQNRMAQHADKHRTDRIFHIGDFVY 1344

Query: 220  LKLQPFRQNSVEFRKNLKFESKYYGPYLILEKVGKVAYKLELPEGSRIHPVFHVSLLKKC 41
            LKLQP+RQ+SV  +++ K   K+YGPY +++++G  AY+LELP  ++IH VFHVS LK+C
Sbjct: 1345 LKLQPYRQSSVRLQRHHKLMPKFYGPYKVVDRIGAAAYQLELPSTAKIHNVFHVSQLKRC 1404



 Score =  327 bits (838), Expect(2) = 0.0
 Identities = 157/321 (48%), Positives = 219/321 (68%)
 Frame = -3

Query: 2132 IVQCPCYFPVTNESSFQRVSKEICIGVFDDILVYSPTWEXXXXXXXXXXXXLRENQLYSK 1953
            +   P  F       F    ++  I  FDDILVYSP+++            LR NQL+ +
Sbjct: 702  LTNAPASFQSLMNHIFHPFLRKFVIIFFDDILVYSPSFQEHLTHLEVIFQTLRNNQLFLR 761

Query: 1952 RSKCQFGQAQV*YLGHIISKEGVVTDPNKISCMTQWPTPTTVKQLRGFLGLTGYYRKFVK 1773
            + KC F   +V YLGH I+KEGV TDP+KI  +  WP P  +KQLRGFLGL GYYR+FVK
Sbjct: 762  KEKCHFATTRVEYLGHFITKEGVSTDPSKIQAVESWPLPINIKQLRGFLGLAGYYRRFVK 821

Query: 1772 DYGLLSRPLTNLLKKDSFQWTQEADDAFRELKTTMCSSPVLALPDFSKPFILETDASGTG 1593
            ++G +++PLT+LL+KD+F W+  A  +F ELK  + ++PVL LPDF+KPF++ETDASGTG
Sbjct: 822  NFGKIAKPLTDLLRKDAFHWSPAATASFNELKNALITAPVLILPDFTKPFVVETDASGTG 881

Query: 1592 VGAVLMQQGRPIAFMSKVLCPKNQALSIYEREFLAVLMAIQKWRHYLQGHKFIIRTDQQS 1413
            +GAVLMQ   P+A++SK L  K QA+SIYERE LA++ A+Q+W  YL    F+I+TDQ+S
Sbjct: 882  IGAVLMQDRHPVAYISKALGIKQQAMSIYERELLAIVYAVQRWGTYLAHKPFVIKTDQKS 941

Query: 1412 LKYLLDQRISTPMQQKWMTKLLGLDYEIEYKRGTENRAADALSRREGEDPLCIAITTVMP 1233
            +K++L+QR++TP QQ WM KL+G D+EI+YK GT N AADALSR+ G + L + +  V  
Sbjct: 942  IKHMLEQRLNTPFQQVWMAKLMGFDFEIQYKEGTSNVAADALSRKVGAELLPLFLGNVNE 1001

Query: 1232 SWVQQVMQSYNQDPYFSNIIA 1170
            +  + +  S++ DP    II+
Sbjct: 1002 NLFEMIKDSWSADPNLQVIIS 1022


>gb|PNY00055.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1005

 Score =  425 bits (1092), Expect(2) = 0.0
 Identities = 196/373 (52%), Positives = 266/373 (71%)
 Frame = -1

Query: 1120 GRLGIGNDSQLRELILSEMHNFPTGGHSGINGTYMRLKGIFYWPGMKEDVMSWVKSCDVC 941
            G+L IG++  ++E IL+ +H+   GGHSG + T  R+K +FYW GM +D++++VK+C +C
Sbjct: 576  GKLVIGSNPTIKETILTWLHSSAIGGHSGRDVTTSRVKSLFYWKGMNKDIITFVKNCAIC 635

Query: 940  ARNKPDSGPYPGLLQPLPIPSQAWTHISMDFIEGLPNSGGKNVILVIVDRFTKYAHFLAL 761
             +NKPD    PGLLQPLPIP+Q WTHISMDF+EGLP S GK VI V+VDR +KYAHF+AL
Sbjct: 636  QKNKPDLAASPGLLQPLPIPNQIWTHISMDFVEGLPTSVGKQVIFVVVDRLSKYAHFMAL 695

Query: 760  SHPFTAQGVAKLFLDTIYRLHGQPLSIVTDRDKVFTSSFWKELFKLMGTKLDMSSAYHPQ 581
            SHP+TA  VA+LFLD +++LHG P SI++DRD +F SSFW + FKL G  L+ SSAYHPQ
Sbjct: 696  SHPYTASDVAQLFLDNVFKLHGLPESIISDRDPIFISSFWNDFFKLQGVALNKSSAYHPQ 755

Query: 580  SDGQTERLNQCLENYLRCMIHTTPKKWLQWLPLAEFWYNTNYHTSMKLTPFQALYGYAPP 401
            SDGQTE +N+CLE YLRCM    P +W +WL LAE+WYN+NYH+S+  TPF+ +YG  PP
Sbjct: 756  SDGQTEVVNKCLETYLRCMCSDRPTQWFKWLSLAEWWYNSNYHSSIHTTPFEVVYGQPPP 815

Query: 400  LHFMGAYLDSTNEEAKDTLRERQLIIETLRGNLLHAQNRMKVYADRHRQKREFEVGEFVY 221
            +H       S       +L  R+  I+ L+ +LL AQNRM   A++HR  R F +G++VY
Sbjct: 816  IHLPYLPGSSATASVDRSLIAREEAIKLLKFHLLRAQNRMTQQANKHRSDRVFAIGDYVY 875

Query: 220  LKLQPFRQNSVEFRKNLKFESKYYGPYLILEKVGKVAYKLELPEGSRIHPVFHVSLLKKC 41
            LKLQP+RQ S++     K   K+YGP+ +L+++G  AY+LELP  + IH VFHVS LK C
Sbjct: 876  LKLQPYRQLSMKSHGFHKLLPKFYGPFPVLDRIGSTAYQLELPPSAAIHNVFHVSQLKLC 935

Query: 40   LGQKHLPSSELPS 2
               + +P   +P+
Sbjct: 936  PNPQGMPIQHIPA 948



 Score =  325 bits (832), Expect(2) = 0.0
 Identities = 160/333 (48%), Positives = 218/333 (65%)
 Frame = -3

Query: 2132 IVQCPCYFPVTNESSFQRVSKEICIGVFDDILVYSPTWEXXXXXXXXXXXXLRENQLYSK 1953
            +   P  F       F    ++  I  FDD+L+YS + E            +R+N L+  
Sbjct: 233  LTNAPASFQSLMNQVFSPFLRKFVIVFFDDLLIYSQSLEDHQVHLQLIFQTIRDNHLFLN 292

Query: 1952 RSKCQFGQAQV*YLGHIISKEGVVTDPNKISCMTQWPTPTTVKQLRGFLGLTGYYRKFVK 1773
            +SKC F   +V YLGH I++EGV TDP KI  ++ WP P  +KQLRGFLGL GYYR+FV+
Sbjct: 293  KSKCNFALPRVEYLGHFITREGVSTDPLKIQAVSSWPIPQNLKQLRGFLGLAGYYRRFVR 352

Query: 1772 DYGLLSRPLTNLLKKDSFQWTQEADDAFRELKTTMCSSPVLALPDFSKPFILETDASGTG 1593
            D+G +++PLT+LLKKDSF W+ EA  AF  LK  + S+PVL LPDFSK FI+ETDASG G
Sbjct: 353  DFGKIAKPLTDLLKKDSFIWSAEATQAFTTLKQALVSAPVLCLPDFSKKFIVETDASGKG 412

Query: 1592 VGAVLMQQGRPIAFMSKVLCPKNQALSIYEREFLAVLMAIQKWRHYLQGHKFIIRTDQQS 1413
            +GAVLMQ   PIA++SK L PK QA+S+YERE LA++ A+QKW  YL    FII+TDQ+S
Sbjct: 413  IGAVLMQNQHPIAYISKSLGPKQQAMSVYERELLAIVYAVQKWGSYLSHAPFIIKTDQKS 472

Query: 1412 LKYLLDQRISTPMQQKWMTKLLGLDYEIEYKRGTENRAADALSRREGEDPLCIAITTVMP 1233
            +K++LDQ+++TP QQ W+ KLLG D+EI+YK G+ N AADALSR+ G + L + ++    
Sbjct: 473  IKHMLDQKLNTPFQQVWVAKLLGFDFEIQYKEGSSNLAADALSRKVGAELLPLILSNASD 532

Query: 1232 SWVQQVMQSYNQDPYFSNIIASKTLDPTTFPDF 1134
               + +  ++ QD +   II     DP +   F
Sbjct: 533  DLWESINLAWQQDTHLKAIIHDLKKDPKSHSKF 565


>dbj|GAU25735.1| hypothetical protein TSUD_216660 [Trifolium subterraneum]
          Length = 1417

 Score =  410 bits (1053), Expect(2) = 0.0
 Identities = 195/360 (54%), Positives = 254/360 (70%)
 Frame = -1

Query: 1120 GRLGIGNDSQLRELILSEMHNFPTGGHSGINGTYMRLKGIFYWPGMKEDVMSWVKSCDVC 941
            G+L IG DS ++  I   +HN   GGHSG + T  R+K +FYW GM +D++ +VK+C VC
Sbjct: 1049 GKLVIGPDSGVKNSIFKWLHNSSLGGHSGRDITASRIKSLFYWKGMAKDIIGYVKNCGVC 1108

Query: 940  ARNKPDSGPYPGLLQPLPIPSQAWTHISMDFIEGLPNSGGKNVILVIVDRFTKYAHFLAL 761
             R+KPD    PGLLQPL IPSQ WT ISMDFIEGLP S GK VI V+VDR +KYAHF+AL
Sbjct: 1109 QRSKPDLAASPGLLQPLSIPSQIWTDISMDFIEGLPPSFGKQVIFVVVDRLSKYAHFMAL 1168

Query: 760  SHPFTAQGVAKLFLDTIYRLHGQPLSIVTDRDKVFTSSFWKELFKLMGTKLDMSSAYHPQ 581
            +HP+TA  +A+LFLD +++LHG P SI +DRD +F S+FW E FKL G  L+ S+AYHPQ
Sbjct: 1169 AHPYTALDIAQLFLDNVFKLHGLPESITSDRDPIFLSTFWTEFFKLQGVALNKSTAYHPQ 1228

Query: 580  SDGQTERLNQCLENYLRCMIHTTPKKWLQWLPLAEFWYNTNYHTSMKLTPFQALYGYAPP 401
            SDGQTE +N+CLE YLRCM    P +W +WL LAE+WYNTNYH+S   TPF+ +YG  PP
Sbjct: 1229 SDGQTEIVNKCLETYLRCMCSDKPTQWSKWLSLAEWWYNTNYHSSTHTTPFEVVYGQPPP 1288

Query: 400  LHFMGAYLDSTNEEAKDTLRERQLIIETLRGNLLHAQNRMKVYADRHRQKREFEVGEFVY 221
            +H       S +     +L  R+  I+ L+ ++L AQNRM   A++HR  R F +G++VY
Sbjct: 1289 IHLPYLPGSSDSLSVDRSLLAREEAIKLLKFHMLRAQNRMSQQANKHRSDRIFAIGDYVY 1348

Query: 220  LKLQPFRQNSVEFRKNLKFESKYYGPYLILEKVGKVAYKLELPEGSRIHPVFHVSLLKKC 41
            LKLQP+RQ S++     K   K+YGP+ +L++VG VAY+LELP  + IH VFHVS LK C
Sbjct: 1349 LKLQPYRQLSLKSHGFHKLLPKFYGPFRVLDRVGSVAYQLELPPSAAIHNVFHVSQLKLC 1408



 Score =  338 bits (868), Expect(2) = 0.0
 Identities = 164/340 (48%), Positives = 225/340 (66%)
 Frame = -3

Query: 2132 IVQCPCYFPVTNESSFQRVSKEICIGVFDDILVYSPTWEXXXXXXXXXXXXLRENQLYSK 1953
            +   P  F       F    ++  I  FD +L+YS + E            +R++ L+  
Sbjct: 706  LTNAPASFQSLMNQVFSSFLRKFVIIFFDVLLIYSKSMEDHIVHLQLIFQTIRDHNLFLN 765

Query: 1952 RSKCQFGQAQV*YLGHIISKEGVVTDPNKISCMTQWPTPTTVKQLRGFLGLTGYYRKFVK 1773
            +SKC F   +V YLGH I+KEGV TDP K+  +  WP P  +KQLRGFLGL GYYR+FVK
Sbjct: 766  KSKCSFALPKVEYLGHFITKEGVSTDPAKVQAVNSWPPPQNLKQLRGFLGLAGYYRRFVK 825

Query: 1772 DYGLLSRPLTNLLKKDSFQWTQEADDAFRELKTTMCSSPVLALPDFSKPFILETDASGTG 1593
            D+G L++PLT+LLKKDSF W++ A  AF +LK  + S+PVL LPDFSKPF++ETDASG G
Sbjct: 826  DFGKLAKPLTDLLKKDSFVWSESATQAFLQLKQALTSAPVLCLPDFSKPFVVETDASGKG 885

Query: 1592 VGAVLMQQGRPIAFMSKVLCPKNQALSIYEREFLAVLMAIQKWRHYLQGHKFIIRTDQQS 1413
            +GAVLMQ+  P+A++SK L PK QA+SIYERE LA++ A+QKW  YL    FII+TDQ+S
Sbjct: 886  IGAVLMQEHHPVAYISKSLGPKQQAMSIYERELLAIVYAVQKWGSYLSHAPFIIKTDQKS 945

Query: 1412 LKYLLDQRISTPMQQKWMTKLLGLDYEIEYKRGTENRAADALSRREGEDPLCIAITTVMP 1233
            +K++LDQ+++TP QQ W+ KLLG D+EI YK G  N AADALSR+ G + L + ++   P
Sbjct: 946  IKHMLDQKLNTPFQQVWVAKLLGFDFEIHYKEGPSNLAADALSRKTGAELLPLVLSNAGP 1005

Query: 1232 SWVQQVMQSYNQDPYFSNIIASKTLDPTTFPDFDIT*GQI 1113
              ++ +  S+  DP+ ++II     DP T P F    G++
Sbjct: 1006 DLLEAIKLSWPHDPHLNSIILDLQKDPNTHPKFSWLRGEL 1045


>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score =  444 bits (1142), Expect(2) = 0.0
 Identities = 206/373 (55%), Positives = 276/373 (73%)
 Frame = -1

Query: 1120 GRLGIGNDSQLRELILSEMHNFPTGGHSGINGTYMRLKGIFYWPGMKEDVMSWVKSCDVC 941
            GR+ +G  +++R L+L   H    GGHSGI  TY R+K +FYWPG+K+ V  +++ C  C
Sbjct: 1180 GRIYVGETTEIRMLLLEAYHASYFGGHSGIRATYHRIKQLFYWPGLKKQVEHYIRECPTC 1239

Query: 940  ARNKPDSGPYPGLLQPLPIPSQAWTHISMDFIEGLPNSGGKNVILVIVDRFTKYAHFLAL 761
               K +    PGLL PL +P  AWTHI+MDFIEGLP S GK+VILV+VDR TKYAHFLAL
Sbjct: 1240 QITKAEHIHIPGLLNPLEVPDMAWTHITMDFIEGLPKSQGKDVILVVVDRLTKYAHFLAL 1299

Query: 760  SHPFTAQGVAKLFLDTIYRLHGQPLSIVTDRDKVFTSSFWKELFKLMGTKLDMSSAYHPQ 581
            SHP+T + V ++F+D I++LHG P+ IVTDRD+VFTS+F++E+FK    KL  S+A+HPQ
Sbjct: 1300 SHPYTVEQVVQIFMDNIHKLHGMPMVIVTDRDRVFTSNFFQEIFKTQKVKLRFSTAHHPQ 1359

Query: 580  SDGQTERLNQCLENYLRCMIHTTPKKWLQWLPLAEFWYNTNYHTSMKLTPFQALYGYAPP 401
            +DGQTER+NQCLE+YLR M    P+KW  WL LAE+WYNT YHTS+++TPFQALYGY PP
Sbjct: 1360 TDGQTERVNQCLESYLRSMTFQEPQKWFSWLALAEWWYNTTYHTSIQMTPFQALYGYPPP 1419

Query: 400  LHFMGAYLDSTNEEAKDTLRERQLIIETLRGNLLHAQNRMKVYADRHRQKREFEVGEFVY 221
                 A   + +EEA+ TL ++ LI++ L+ ++  AQ R+K YAD+ R +R  E+G+ VY
Sbjct: 1420 QITEFAIPCNMSEEARVTLEDKALILQKLKSSIGEAQRRIKFYADKGRSERTLELGDMVY 1479

Query: 220  LKLQPFRQNSVEFRKNLKFESKYYGPYLILEKVGKVAYKLELPEGSRIHPVFHVSLLKKC 41
            LKLQP+RQ ++  R +LK  SKYYGP+ ++EK+G VAYKL+LP+G+ IHPVFHVS LKK 
Sbjct: 1480 LKLQPYRQVAMGIRGSLKLRSKYYGPFKVIEKMGAVAYKLQLPDGAGIHPVFHVSQLKKH 1539

Query: 40   LGQKHLPSSELPS 2
            LG + +P   LP+
Sbjct: 1540 LGARAIPMPNLPA 1552



 Score =  303 bits (775), Expect(2) = 0.0
 Identities = 153/322 (47%), Positives = 205/322 (63%), Gaps = 1/322 (0%)
 Frame = -3

Query: 2132 IVQCPCYFPVTNESSFQRVSKEICIGVFDDILVYSPTWEXXXXXXXXXXXXLRENQLYSK 1953
            +   P  F            ++  +  F DIL+YS T              L  NQL  +
Sbjct: 836  LTNAPATFQALMNQVLAPFLRKFVLVFFADILIYSKTQSEHLEHIKLVMQALSANQLVVR 895

Query: 1952 RSKCQFGQAQV*YLGHIISKEGVVTDPNKISCMTQWPTPTTVKQLRGFLGLTGYYRKFVK 1773
              KC+FG  +V YLGHIIS EGV TDP KIS +     P  V ++R FLG+ GYYR+F+K
Sbjct: 896  LKKCEFGLDRVSYLGHIISSEGVSTDPKKISDIKNRKPPKNVTEVREFLGMAGYYRRFIK 955

Query: 1772 DYGLLSRPLTNLLKKDSFQWTQEADDAFRELKTTMCSSPVLALPDFSKPFILETDASGTG 1593
             YG++ RPL +LLKKD F+W     +AF  LK  MC+SPVLALPDFS+PF++ETDA G G
Sbjct: 956  GYGVICRPLHDLLKKDGFKWGDTQQEAFELLKEKMCNSPVLALPDFSQPFVIETDACGIG 1015

Query: 1592 VGAVLMQQGRPIAFMSKVLCPKNQALSIYEREFLAVLMAIQKWRHYLQGHKFIIRTDQQS 1413
            +GAVLMQ+GRP+A+ SK L PK  A S+YE+E +A+L A++KWRHY+ G   II+TDQQS
Sbjct: 1016 IGAVLMQKGRPLAYFSKALGPKAAAQSVYEKEAIAILEALKKWRHYILGGSLIIKTDQQS 1075

Query: 1412 LKYLLDQRISTPMQQKWMTKLLGLDYEIEYKRGTENRAADALSRREG-EDPLCIAITTVM 1236
            LK+++ QR+   +Q K + KL+  DY IEYK G EN  ADALSR    ++  C+ IT V+
Sbjct: 1076 LKFMMSQRLVEGIQHKLLLKLMEFDYVIEYKSGKENLVADALSRSPNLKEEQCLPITVVV 1135

Query: 1235 PSWVQQVMQSYNQDPYFSNIIA 1170
            P WVQ + +SY +D +   I++
Sbjct: 1136 PEWVQDIKRSYEEDIFAHKILS 1157


>gb|PKA61698.1| putative mitochondrial protein [Apostasia shenzhenica]
          Length = 1390

 Score =  417 bits (1072), Expect(2) = 0.0
 Identities = 194/373 (52%), Positives = 270/373 (72%)
 Frame = -1

Query: 1120 GRLGIGNDSQLRELILSEMHNFPTGGHSGINGTYMRLKGIFYWPGMKEDVMSWVKSCDVC 941
            G+L +G+DS+LR  I+  MH   TGGHSG   T  R+K +F+W G+ + V + +K C+VC
Sbjct: 957  GKLVVGSDSELRFHIVQMMHADATGGHSGAYATMKRIKTVFHWRGINKLVRAMIKQCEVC 1016

Query: 940  ARNKPDSGPYPGLLQPLPIPSQAWTHISMDFIEGLPNSGGKNVILVIVDRFTKYAHFLAL 761
             R+K D+  YPG LQPLPIP++AW+ ISMDFIEGLP S G+N+ILV+VDR TKYAHF+AL
Sbjct: 1017 QRSKYDASAYPGFLQPLPIPNKAWSDISMDFIEGLPPSNGRNIILVVVDRLTKYAHFIAL 1076

Query: 760  SHPFTAQGVAKLFLDTIYRLHGQPLSIVTDRDKVFTSSFWKELFKLMGTKLDMSSAYHPQ 581
            SHP++A  VA++FLD +++LHG P +IV+DRD VF S FWK+  +L G    MS+AYHPQ
Sbjct: 1077 SHPYSALEVAQIFLDNVFKLHGMPTTIVSDRDPVFISKFWKDFLRLQGVAQHMSTAYHPQ 1136

Query: 580  SDGQTERLNQCLENYLRCMIHTTPKKWLQWLPLAEFWYNTNYHTSMKLTPFQALYGYAPP 401
            +DGQTE +N+CLE YLRCM H  PK+W++WLPLAE+WYNTNYH+S++++P++ALYG + P
Sbjct: 1137 TDGQTEVVNRCLETYLRCMTHERPKQWVRWLPLAEWWYNTNYHSSIRMSPYEALYGQSAP 1196

Query: 400  LHFMGAYLDSTNEEAKDTLRERQLIIETLRGNLLHAQNRMKVYADRHRQKREFEVGEFVY 221
            L       +S  +    +L   +     L+ NL  AQNRM+  A+R R +   EV ++VY
Sbjct: 1197 LSVPYTTGESEVDAVDRSLSAHETARIMLKKNLEIAQNRMRQLANRKRSECTLEVTDWVY 1256

Query: 220  LKLQPFRQNSVEFRKNLKFESKYYGPYLILEKVGKVAYKLELPEGSRIHPVFHVSLLKKC 41
            +KL+P+RQ+S+  R + K   +Y+ P+ ++EK+G VAYKL+LPEGS+IH VFH+S+LKK 
Sbjct: 1257 VKLKPYRQDSIAHRVSHKLSPRYFSPFQVIEKIGSVAYKLKLPEGSKIHAVFHISMLKKH 1316

Query: 40   LGQKHLPSSELPS 2
            +G  H      PS
Sbjct: 1317 VG-NHPAEGSFPS 1328



 Score =  329 bits (844), Expect(2) = 0.0
 Identities = 169/329 (51%), Positives = 218/329 (66%), Gaps = 2/329 (0%)
 Frame = -3

Query: 2132 IVQCPCYFPVTNESSFQRVSKEICIGVFDDILVYSPTWEXXXXXXXXXXXXLRENQLYSK 1953
            +   P  F       FQ   ++  +  F DILVYS  W             LR + L  K
Sbjct: 614  LTNAPSTFQSLMNEVFQPYLRKFILVFFYDILVYSADWISHLHHLETVFLLLRTHHLNVK 673

Query: 1952 RSKCQFGQAQV*YLGHIISKEGVVTDPNKISCMTQWPTPTTVKQLRGFLGLTGYYRKFVK 1773
            RSKC FG  +V YLGHIIS EGV  DP K+  M  WP P +VK+LRGFLGLTGYYR+F++
Sbjct: 674  RSKCLFGVNKVNYLGHIISAEGVEADPEKLEAMKLWPLPKSVKELRGFLGLTGYYRRFIQ 733

Query: 1772 DYGLLSRPLTNLLKKDSFQWTQEADDAFRELKTTMCSSPVLALPDFSKPFILETDASGTG 1593
            +YG  ++PLT LLK + FQW++EA+ AF +LK  + S PVLALP+FSK F+LETDASG G
Sbjct: 734  NYGQKAKPLTALLKLNGFQWSEEANAAFEQLKMAVTSPPVLALPNFSKEFLLETDASGNG 793

Query: 1592 VGAVLMQQGRPIAFMSKVLCPKNQALSIYEREFLAVLMAIQKWRHYLQGHKFIIRTDQQS 1413
            +GAVLMQ+GRPIA+ SK L  KN  LSIYE+E LA++ AIQKWRHYL G  F IRTDQ+S
Sbjct: 794  IGAVLMQEGRPIAYFSKALSGKNLLLSIYEKEMLAIVAAIQKWRHYLVGVHFKIRTDQES 853

Query: 1412 LKYLLDQRISTPMQQKWMTKLLGLDYEIEYKRGTENRAADALSRREGEDPLCIA--ITTV 1239
            LKYL++QRISTP QQKW+ +L+G DYEI +KRG +N+ ADALSRR           +  +
Sbjct: 854  LKYLMEQRISTPAQQKWIARLIGYDYEITFKRGVDNKVADALSRRTFSSAAIQGHIVQGI 913

Query: 1238 MPSWVQQVMQSYNQDPYFSNIIASKTLDP 1152
              + +Q++ QS+  D     +I+   ++P
Sbjct: 914  STNLMQRIQQSWQTDSKLQQLISDLQINP 942


>ref|XP_023156358.1| uncharacterized protein LOC111589729 isoform X1 [Zea mays]
          Length = 1567

 Score =  426 bits (1096), Expect(2) = 0.0
 Identities = 206/371 (55%), Positives = 263/371 (70%)
 Frame = -1

Query: 1117 RLGIGNDSQLRELILSEMHNFPTGGHSGINGTYMRLKGIFYWPGMKEDVMSWVKSCDVCA 938
            RL +G +  L+  ++S  H  P GGHSGI  TY R+K +F W G+K DV  +V+ C VC 
Sbjct: 1110 RLVVGQNVGLQTKLISAFHASPLGGHSGIQATYQRVKKLFLWNGLKADVEQFVRQCHVCQ 1169

Query: 937  RNKPDSGPYPGLLQPLPIPSQAWTHISMDFIEGLPNSGGKNVILVIVDRFTKYAHFLALS 758
            + K +   YPGLLQPLPIP  +W  +SMDFIEGLP S G +VILV+VDR TKYAHFLA+ 
Sbjct: 1170 QAKHEHCKYPGLLQPLPIPQSSWQDLSMDFIEGLPKSNGYSVILVVVDRLTKYAHFLAVK 1229

Query: 757  HPFTAQGVAKLFLDTIYRLHGQPLSIVTDRDKVFTSSFWKELFKLMGTKLDMSSAYHPQS 578
            HPFTA  +A LF   + +LHG P +IV+DRDKVFTS+FW+ELFKL GT+L +SSAYHPQS
Sbjct: 1230 HPFTASHIAHLFFSQVVKLHGFPHTIVSDRDKVFTSTFWQELFKLSGTQLHLSSAYHPQS 1289

Query: 577  DGQTERLNQCLENYLRCMIHTTPKKWLQWLPLAEFWYNTNYHTSMKLTPFQALYGYAPPL 398
            DGQTER+NQCLE +LRC +H +P +W +WL  AE WYNT+YHTS+K +PF+ALYG  P L
Sbjct: 1290 DGQTERVNQCLEMFLRCAVHNSPSQWAKWLDSAELWYNTSYHTSIKCSPFKALYGVEPNL 1349

Query: 397  HFMGAYLDSTNEEAKDTLRERQLIIETLRGNLLHAQNRMKVYADRHRQKREFEVGEFVYL 218
              +         EA+ TL++RQ  +E ++ NL  AQ+RMK YAD +R  R+F++G+ VYL
Sbjct: 1350 GCIPVTDSLNPSEAQLTLQQRQEFLEVIKTNLASAQSRMKHYADLNRSFRQFQIGDLVYL 1409

Query: 217  KLQPFRQNSVEFRKNLKFESKYYGPYLILEKVGKVAYKLELPEGSRIHPVFHVSLLKKCL 38
            KLQPF Q SV +R   K   KY+GP+ I++KVG  AYKL LPE + IHPVFHVS LK  +
Sbjct: 1410 KLQPFAQVSVAYRPCAKLSFKYFGPFKIVDKVGSAAYKLLLPESANIHPVFHVSQLKTHV 1469

Query: 37   GQKHLPSSELP 5
                   +ELP
Sbjct: 1470 PDYTPVFTELP 1480



 Score =  318 bits (816), Expect(2) = 0.0
 Identities = 164/340 (48%), Positives = 220/340 (64%)
 Frame = -3

Query: 2132 IVQCPCYFPVTNESSFQRVSKEICIGVFDDILVYSPTWEXXXXXXXXXXXXLRENQLYSK 1953
            +   P  F     + FQ++ ++  +   DDILVYSP+ E            L  +QLY+K
Sbjct: 767  LTNAPATFQCLMNAVFQQLMRKCVLIFMDDILVYSPSLETHVVHLQQVFQVLETHQLYAK 826

Query: 1952 RSKCQFGQAQV*YLGHIISKEGVVTDPNKISCMTQWPTPTTVKQLRGFLGLTGYYRKFVK 1773
            RSKC F   Q+ YLGHIIS +GV TDP+K   M +WPTP +  +LRGFLGLTGYYRKFVK
Sbjct: 827  RSKCAFALTQIEYLGHIISDKGVSTDPSKTESMRRWPTPKSHTELRGFLGLTGYYRKFVK 886

Query: 1772 DYGLLSRPLTNLLKKDSFQWTQEADDAFRELKTTMCSSPVLALPDFSKPFILETDASGTG 1593
             YG+L++PLT LL++  F W   A  AF  LK  M ++PVLALP+FS+ F++ETDA  TG
Sbjct: 887  GYGILAKPLTVLLQQKQFGWPPSAQTAFEALKDAMITTPVLALPNFSETFVIETDACDTG 946

Query: 1592 VGAVLMQQGRPIAFMSKVLCPKNQALSIYEREFLAVLMAIQKWRHYLQGHKFIIRTDQQS 1413
            +GAVL Q+G P+AF SK L  KN  LS YE+EFLA+LMA++KWR YL    F+IRTD +S
Sbjct: 947  IGAVLSQKGHPVAFYSKALGVKNSQLSTYEKEFLAILMAVEKWRCYLSRGPFVIRTDHRS 1006

Query: 1412 LKYLLDQRISTPMQQKWMTKLLGLDYEIEYKRGTENRAADALSRREGEDPLCIAITTVMP 1233
            L +L DQ ++T MQ+K MTKL GL + ++YK+G EN+AADALSR      L  AI+   P
Sbjct: 1007 LCHLQDQTLATDMQKKAMTKLAGLQFSVQYKKGAENKAADALSRVAHNMELS-AISATTP 1065

Query: 1232 SWVQQVMQSYNQDPYFSNIIASKTLDPTTFPDFDIT*GQI 1113
             W+Q++  SY  D +  +++A   +       F++  G I
Sbjct: 1066 VWLQEITNSYELDTHAQSLLAELAVSSPNEQGFELKNGLI 1105


>gb|PNX92911.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1478

 Score =  420 bits (1079), Expect(2) = 0.0
 Identities = 196/373 (52%), Positives = 263/373 (70%)
 Frame = -1

Query: 1120 GRLGIGNDSQLRELILSEMHNFPTGGHSGINGTYMRLKGIFYWPGMKEDVMSWVKSCDVC 941
            G+L IG +  ++  ILS +H+   GGHSG + T  R++ +FYW GM +DV+++V++C +C
Sbjct: 1049 GKLVIGANHDIKLSILSWLHDSAIGGHSGRDVTLSRIRSLFYWKGMAKDVLNYVRNCGIC 1108

Query: 940  ARNKPDSGPYPGLLQPLPIPSQAWTHISMDFIEGLPNSGGKNVILVIVDRFTKYAHFLAL 761
             ++KPD    PGLLQPLPIP+  WT ISMDFIEGLP SGGK VI V+VDR +KYAHF+AL
Sbjct: 1109 QKSKPDLAASPGLLQPLPIPTLIWTDISMDFIEGLPKSGGKQVIFVVVDRLSKYAHFMAL 1168

Query: 760  SHPFTAQGVAKLFLDTIYRLHGQPLSIVTDRDKVFTSSFWKELFKLMGTKLDMSSAYHPQ 581
            +HP+TA  VA+LFLD +++LHG P SI +DRD +F S+FW E FKL G  L+ SSAYHPQ
Sbjct: 1169 AHPYTASDVAQLFLDNVFKLHGLPESITSDRDPIFISTFWNEFFKLQGVALNKSSAYHPQ 1228

Query: 580  SDGQTERLNQCLENYLRCMIHTTPKKWLQWLPLAEFWYNTNYHTSMKLTPFQALYGYAPP 401
            SDGQTE +N+CLE YLRCM    P +W +WL LAE+WYNTNYH+S++ TPF+ +YG  PP
Sbjct: 1229 SDGQTEIVNKCLETYLRCMCSDKPTQWFKWLSLAEWWYNTNYHSSIRTTPFEVVYGQPPP 1288

Query: 400  LHFMGAYLDSTNEEAKDTLRERQLIIETLRGNLLHAQNRMKVYADRHRQKREFEVGEFVY 221
            +H       +T+     +L  R+ +I+ L+ +LL AQNRM   AD+HR  R F +G+FVY
Sbjct: 1289 IHLPYLPGAATSVSVDRSLIAREEVIKLLQFHLLRAQNRMSQQADKHRSDRVFSIGDFVY 1348

Query: 220  LKLQPFRQNSVEFRKNLKFESKYYGPYLILEKVGKVAYKLELPEGSRIHPVFHVSLLKKC 41
            LKLQP+RQ S++     K   K+YGP+ +L+++G  AY L+LP  +  H VFHVS LK C
Sbjct: 1349 LKLQPYRQLSLKSHGVHKLLPKFYGPFKVLDRIGLAAYALDLPPSTVFHNVFHVSQLKLC 1408

Query: 40   LGQKHLPSSELPS 2
                H P   LP+
Sbjct: 1409 PNPHHHPIQHLPA 1421



 Score =  325 bits (832), Expect(2) = 0.0
 Identities = 155/333 (46%), Positives = 218/333 (65%)
 Frame = -3

Query: 2132 IVQCPCYFPVTNESSFQRVSKEICIGVFDDILVYSPTWEXXXXXXXXXXXXLRENQLYSK 1953
            +   P  F       FQ   ++  I  FDD+L+YS + E            +R+N L   
Sbjct: 706  LTNAPASFQSLMNHVFQPFLRKFVIIFFDDLLIYSKSLEDHVCHLRMIFQTVRDNHLLLN 765

Query: 1952 RSKCQFGQAQV*YLGHIISKEGVVTDPNKISCMTQWPTPTTVKQLRGFLGLTGYYRKFVK 1773
            +SKC F   +V YLGH I+ +G+ TDP+KI  ++ WP P  +KQLRGFLGL GYYR+FVK
Sbjct: 766  KSKCSFALPKVEYLGHFITVDGISTDPSKIQAVSSWPIPQNLKQLRGFLGLAGYYRRFVK 825

Query: 1772 DYGLLSRPLTNLLKKDSFQWTQEADDAFRELKTTMCSSPVLALPDFSKPFILETDASGTG 1593
            D+G +++PLT+LLKKD F W++ A  AF  LK  + ++PVL LPDF+K F++ETDASGTG
Sbjct: 826  DFGKIAKPLTDLLKKDCFIWSENATSAFLNLKQALVTAPVLCLPDFTKKFVVETDASGTG 885

Query: 1592 VGAVLMQQGRPIAFMSKVLCPKNQALSIYEREFLAVLMAIQKWRHYLQGHKFIIRTDQQS 1413
            +GAVLMQ   P+A++SK L PK QA+SIYERE LA++ A+QKW  YL    F+I+TDQ+S
Sbjct: 886  IGAVLMQDHHPVAYISKSLGPKQQAMSIYEREMLAIVYAVQKWGSYLSHAPFVIKTDQKS 945

Query: 1412 LKYLLDQRISTPMQQKWMTKLLGLDYEIEYKRGTENRAADALSRREGEDPLCIAITTVMP 1233
            +K++LDQ+++TP QQ W+ KL+G D+EI+Y+ G+ N AADALSR+ G + L + +     
Sbjct: 946  IKHMLDQKLNTPFQQVWVAKLMGFDFEIQYREGSSNLAADALSRKTGAELLILLLNNAST 1005

Query: 1232 SWVQQVMQSYNQDPYFSNIIASKTLDPTTFPDF 1134
              +Q +  S+  D   ++II     DP   P F
Sbjct: 1006 DLLQAIQLSWQSDSILNSIIQDLQKDPKIHPKF 1038


>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1475

 Score =  424 bits (1090), Expect(3) = 0.0
 Identities = 192/373 (51%), Positives = 275/373 (73%)
 Frame = -1

Query: 1120 GRLGIGNDSQLRELILSEMHNFPTGGHSGINGTYMRLKGIFYWPGMKEDVMSWVKSCDVC 941
            GR+ +G  + +R  +++  H+   GGHSG+  T+ R+K +FYW GM+ +V  +++ C  C
Sbjct: 1044 GRIYVGEATDIRRQLITTYHSSSFGGHSGMRATHHRIKMLFYWHGMRGEVERFIRECPTC 1103

Query: 940  ARNKPDSGPYPGLLQPLPIPSQAWTHISMDFIEGLPNSGGKNVILVIVDRFTKYAHFLAL 761
               K +    PGLL PL IP  AWTHI+MDFIEGLP S GK+VILV+VDR TKYAHF+AL
Sbjct: 1104 QITKSEHVHIPGLLNPLEIPDMAWTHITMDFIEGLPKSQGKDVILVVVDRLTKYAHFIAL 1163

Query: 760  SHPFTAQGVAKLFLDTIYRLHGQPLSIVTDRDKVFTSSFWKELFKLMGTKLDMSSAYHPQ 581
            +HP+  + V + F++ I++LHG P+ I+TDRD++FTSS ++E+FK M  KL  S+AYHPQ
Sbjct: 1164 AHPYDVEQVVEAFMNNIHKLHGMPMVIITDRDRIFTSSLFQEIFKAMKVKLRFSTAYHPQ 1223

Query: 580  SDGQTERLNQCLENYLRCMIHTTPKKWLQWLPLAEFWYNTNYHTSMKLTPFQALYGYAPP 401
             DGQTER+NQCLE+YLR M    P KW  WL LAE+WYNT +HT++++TPF+A+YGY+PP
Sbjct: 1224 MDGQTERVNQCLESYLRNMTFQEPHKWYSWLALAEWWYNTTFHTAIQMTPFKAMYGYSPP 1283

Query: 400  LHFMGAYLDSTNEEAKDTLRERQLIIETLRGNLLHAQNRMKVYADRHRQKREFEVGEFVY 221
                 +   + +EEA+ T+ E++ I+  L+ +L  AQ+RMK +AD++R +R  EVG+ VY
Sbjct: 1284 QINEFSVPCNISEEARVTIEEKEAILNKLKNSLADAQHRMKYFADKNRTERNLEVGDMVY 1343

Query: 220  LKLQPFRQNSVEFRKNLKFESKYYGPYLILEKVGKVAYKLELPEGSRIHPVFHVSLLKKC 41
            LKL+P+RQ++   R +LK  SK+YGP+ +L+K+G++AYKL+LP+ ++IHPVFHVS LKK 
Sbjct: 1344 LKLKPYRQSAFGIRGSLKLRSKFYGPFKVLQKIGQLAYKLQLPDDAQIHPVFHVSQLKKH 1403

Query: 40   LGQKHLPSSELPS 2
            LG+  +P S LPS
Sbjct: 1404 LGKHAIPMSNLPS 1416



 Score =  291 bits (745), Expect(3) = 0.0
 Identities = 146/297 (49%), Positives = 192/297 (64%), Gaps = 3/297 (1%)
 Frame = -3

Query: 2051 FDDILVYSPTWEXXXXXXXXXXXXLRENQLYSKRSKCQFGQAQV*YLGHIISKEGVVTDP 1872
            FDDIL+YS T              L++N L  K  KC FG A V YLGH+IS++GV TDP
Sbjct: 725  FDDILIYSKTRAEHLEHVKLVMQALQDNHLVIKLKKCAFGLASVSYLGHVISQDGVATDP 784

Query: 1871 NKISCMTQWPTPTTVKQLRGFLGLTGYYRKFVKDYGLLSRPLTNLLKKDSFQWTQEADDA 1692
             K+  +  WPTP  V  +R FLG+TGYYR+F++ YG + RP+ ++LKK+ FQW  +   A
Sbjct: 785  KKVGKIKNWPTPKDVTDVRKFLGMTGYYRRFIQGYGTICRPIHDMLKKNGFQWGADQTTA 844

Query: 1691 FRELKTTMCSSPVLALPDFSKPFILETDASGTGVGAVLMQQGRPIAFMSKVLCPKNQALS 1512
            F  LK  + +SPVLALPDF + F +E DA G G+GAVLMQ GRPIAF SK L PK    S
Sbjct: 845  FETLKHKLRTSPVLALPDFDQAFTIEADACGVGIGAVLMQGGRPIAFFSKALGPKAAGQS 904

Query: 1511 IYEREFLAVLMAIQKWRHYLQGHKFIIRTDQQSLKYLLDQRISTPMQQKWMTKLLGLDYE 1332
            IYE+E +A+L A++KWRHY+ G K II+TDQQSLK+++ QR+   +Q K + KL+  DY 
Sbjct: 905  IYEKEAMAILEALKKWRHYVLGSKLIIKTDQQSLKFMMGQRLVEGIQHKLLLKLMEYDYT 964

Query: 1331 IEYKRGTENRAADALSR---REGEDPLCIAITTVMPSWVQQVMQSYNQDPYFSNIIA 1170
            IEYK G EN  ADALSR   +E     C  +T V+P W+  + +SY  D     I++
Sbjct: 965  IEYKSGKENLVADALSRLPQKEAVADRCHPMTVVIPEWIVDIQRSYENDVQAHKILS 1021



 Score = 50.1 bits (118), Expect(3) = 0.0
 Identities = 25/38 (65%), Positives = 29/38 (76%), Gaps = 3/38 (7%)
 Frame = -1

Query: 2143 MPFGLCNAPATFQSLMNQVFREYLRKFVLVF---LMIY 2039
            MPFGL N PATFQSLMN V   +LR+FVLVF   ++IY
Sbjct: 694  MPFGLTNDPATFQSLMNHVLAPFLRRFVLVFFDDILIY 731


>dbj|GAU27517.1| hypothetical protein TSUD_147110 [Trifolium subterraneum]
          Length = 1224

 Score =  407 bits (1047), Expect(2) = 0.0
 Identities = 190/373 (50%), Positives = 257/373 (68%)
 Frame = -1

Query: 1120 GRLGIGNDSQLRELILSEMHNFPTGGHSGINGTYMRLKGIFYWPGMKEDVMSWVKSCDVC 941
            G+L IG D  L+++IL+ +H+ P+GGHSG + T  R+K +F+W G+ +D+  +V++CDVC
Sbjct: 791  GKLVIGADPTLKQIILNWLHDSPSGGHSGRDVTAARVKSLFFWKGVNKDIQHYVRNCDVC 850

Query: 940  ARNKPDSGPYPGLLQPLPIPSQAWTHISMDFIEGLPNSGGKNVILVIVDRFTKYAHFLAL 761
             R KPD    PGLLQPLPIP   W  ISMDFIEGLP S  K VI V+VDR +KYAHF+AL
Sbjct: 851  QRCKPDLSASPGLLQPLPIPKLVWDAISMDFIEGLPTSSKKQVIFVVVDRLSKYAHFMAL 910

Query: 760  SHPFTAQGVAKLFLDTIYRLHGQPLSIVTDRDKVFTSSFWKELFKLMGTKLDMSSAYHPQ 581
            +HP+TA  VA+ FLD +++LHG P +I +DRD +F S  W ELF+L G  L+ S+AYHPQ
Sbjct: 911  AHPYTALDVAQQFLDNVFKLHGMPSTITSDRDPIFLSKVWNELFQLQGVALNKSTAYHPQ 970

Query: 580  SDGQTERLNQCLENYLRCMIHTTPKKWLQWLPLAEFWYNTNYHTSMKLTPFQALYGYAPP 401
            SDGQTE +N+CLE YLRCM    P  W QWL LAE+WYNTNYHTS+  TPF+ +YG  PP
Sbjct: 971  SDGQTEVVNKCLETYLRCMCADKPSSWSQWLSLAEWWYNTNYHTSIHSTPFEVVYGQPPP 1030

Query: 400  LHFMGAYLDSTNEEAKDTLRERQLIIETLRGNLLHAQNRMKVYADRHRQKREFEVGEFVY 221
            +H      ++T      +L  R   I+ L+ +LL AQN+M    ++HR  + F +G+ VY
Sbjct: 1031 IHLPYLPEEATAAVVDRSLSARDAAIQLLKFHLLRAQNKMTQQVNKHRSDKTFSIGDMVY 1090

Query: 220  LKLQPFRQNSVEFRKNLKFESKYYGPYLILEKVGKVAYKLELPEGSRIHPVFHVSLLKKC 41
            LKLQP+RQ+++   +  K   K+YGP+ IL+ +G+VAY+LELP  + IH VFHVS LK C
Sbjct: 1091 LKLQPYRQSTIRKSQFHKLVPKFYGPFKILDSIGQVAYQLELPPNAAIHNVFHVSQLKLC 1150

Query: 40   LGQKHLPSSELPS 2
               +   +  LP+
Sbjct: 1151 FNPQIATTYPLPN 1163



 Score =  334 bits (856), Expect(2) = 0.0
 Identities = 164/340 (48%), Positives = 228/340 (67%)
 Frame = -3

Query: 2132 IVQCPCYFPVTNESSFQRVSKEICIGVFDDILVYSPTWEXXXXXXXXXXXXLRENQLYSK 1953
            +   P  F       FQ+  ++  I  FDDIL+YS + E            LRE++L+ +
Sbjct: 448  LTNAPASFQSLMNILFQQYLRKFVIIFFDDILIYSSSLEDHVLHLDKVFQILREHKLFLR 507

Query: 1952 RSKCQFGQAQV*YLGHIISKEGVVTDPNKISCMTQWPTPTTVKQLRGFLGLTGYYRKFVK 1773
            + KC F  ++V YLGH+I+KEGV TDPNKI  ++ WP P++VKQLRGFLGL GYYR+FVK
Sbjct: 508  KEKCCFATSRVEYLGHVITKEGVSTDPNKIQVVSSWPLPSSVKQLRGFLGLAGYYRRFVK 567

Query: 1772 DYGLLSRPLTNLLKKDSFQWTQEADDAFRELKTTMCSSPVLALPDFSKPFILETDASGTG 1593
            D+G +++PL ++LKK +F W+ EA  AF ELK  + S+PVLALP+F++PFILET+ASG G
Sbjct: 568  DFGKIAKPLNDMLKKYAFHWSIEATQAFTELKHALTSTPVLALPNFNQPFILETNASGKG 627

Query: 1592 VGAVLMQQGRPIAFMSKVLCPKNQALSIYEREFLAVLMAIQKWRHYLQGHKFIIRTDQQS 1413
            +GAVLMQ   PIA++SK L PK QA+S+YERE LA++ AIQKW  YL    FII+TDQ+S
Sbjct: 628  IGAVLMQNKHPIAYISKALGPKQQAMSVYERELLAIVYAIQKWSTYLAYRHFIIKTDQKS 687

Query: 1412 LKYLLDQRISTPMQQKWMTKLLGLDYEIEYKRGTENRAADALSRREGEDPLCIAITTVMP 1233
            +K++L+QR++TP QQ WM KL+G D+EI YK G  N  ADALSRR G + L + +     
Sbjct: 688  IKFMLEQRLNTPFQQVWMAKLMGYDFEIHYKEGVNNNVADALSRRTGAELLPLLLNNAQE 747

Query: 1232 SWVQQVMQSYNQDPYFSNIIASKTLDPTTFPDFDIT*GQI 1113
              ++++ +S++ D    N I     D  + P F    G++
Sbjct: 748  DLLERIKESWSNDVVLHNSIQELQADAKSHPKFTWCRGEL 787


>gb|PNY17729.1| retrotransposon-related protein [Trifolium pratense]
          Length = 1479

 Score =  417 bits (1071), Expect(2) = 0.0
 Identities = 194/373 (52%), Positives = 262/373 (70%)
 Frame = -1

Query: 1120 GRLGIGNDSQLRELILSEMHNFPTGGHSGINGTYMRLKGIFYWPGMKEDVMSWVKSCDVC 941
            G+L IG+D  ++E IL+ +H+   GGHSG + T  ++K +FYW GM +D++++VK+C +C
Sbjct: 1049 GKLVIGSDPAIKETILTWLHSSAVGGHSGRDVTASKVKSLFYWKGMNKDILNFVKNCAIC 1108

Query: 940  ARNKPDSGPYPGLLQPLPIPSQAWTHISMDFIEGLPNSGGKNVILVIVDRFTKYAHFLAL 761
             + KPD    PGLLQPLPIPS  W HISMDFI+GLP S GK VI V+VDR +KYAHF+AL
Sbjct: 1109 QKQKPDLAASPGLLQPLPIPSHIWAHISMDFIDGLPTSSGKQVIFVVVDRLSKYAHFMAL 1168

Query: 760  SHPFTAQGVAKLFLDTIYRLHGQPLSIVTDRDKVFTSSFWKELFKLMGTKLDMSSAYHPQ 581
            +HP+TA  VA+LFLD +++LHG P SI +DRD +F S+FW E FKL G  L+ SSAYHPQ
Sbjct: 1169 AHPYTALDVAQLFLDNVFKLHGLPESITSDRDPIFLSNFWNEFFKLQGVALNKSSAYHPQ 1228

Query: 580  SDGQTERLNQCLENYLRCMIHTTPKKWLQWLPLAEFWYNTNYHTSMKLTPFQALYGYAPP 401
            SDGQTE +N+CLE YLRCM    P +W +WL LAE+WYNTN+H+S+  TPF+ +YG  PP
Sbjct: 1229 SDGQTEIVNKCLETYLRCMCSDHPTQWFKWLSLAEWWYNTNFHSSIHTTPFEVVYGQPPP 1288

Query: 400  LHFMGAYLDSTNEEAKDTLRERQLIIETLRGNLLHAQNRMKVYADRHRQKREFEVGEFVY 221
            +H       S       +L  R+  I+ L+ +LL AQNRM   A++HR  R F +G++VY
Sbjct: 1289 IHLPYLPGSSATLSVDRSLIAREEAIKLLKFHLLRAQNRMVQQANKHRSDRVFNIGDYVY 1348

Query: 220  LKLQPFRQNSVEFRKNLKFESKYYGPYLILEKVGKVAYKLELPEGSRIHPVFHVSLLKKC 41
            LKLQP+RQ S++     K   K+YGP+ I++++G  AY+L+LP  + IH VFHVS LK C
Sbjct: 1349 LKLQPYRQLSMKSHGFHKLLPKFYGPFPIVDRIGAAAYQLQLPPSAAIHNVFHVSQLKLC 1408

Query: 40   LGQKHLPSSELPS 2
               + LP   LP+
Sbjct: 1409 PNPQGLPVQHLPA 1421



 Score =  324 bits (831), Expect(2) = 0.0
 Identities = 158/320 (49%), Positives = 217/320 (67%)
 Frame = -3

Query: 2132 IVQCPCYFPVTNESSFQRVSKEICIGVFDDILVYSPTWEXXXXXXXXXXXXLRENQLYSK 1953
            +   P  F       F+   ++  I  FDD+LVYS +              +REN L+  
Sbjct: 706  LTNAPASFQALMNQVFKPFLRKFVIVFFDDLLVYSHSLVDHHVHLQLIFQTIRENHLFLN 765

Query: 1952 RSKCQFGQAQV*YLGHIISKEGVVTDPNKISCMTQWPTPTTVKQLRGFLGLTGYYRKFVK 1773
            +SKC F   +V YLGH IS+EGV TDP KI  ++ WP P  +KQLRGFLGL GYYR+FVK
Sbjct: 766  QSKCAFALPRVEYLGHFISREGVSTDPLKIQAVSSWPIPQNLKQLRGFLGLAGYYRRFVK 825

Query: 1772 DYGLLSRPLTNLLKKDSFQWTQEADDAFRELKTTMCSSPVLALPDFSKPFILETDASGTG 1593
            D+G L++PLT+LL+KD+F W+ EA  AF  LK  + S+PVL+LPDFSK F++ETDASG G
Sbjct: 826  DFGKLAKPLTDLLRKDNFNWSAEATHAFVTLKQALVSAPVLSLPDFSKRFVVETDASGKG 885

Query: 1592 VGAVLMQQGRPIAFMSKVLCPKNQALSIYEREFLAVLMAIQKWRHYLQGHKFIIRTDQQS 1413
            +GAVLMQ+  PIA++SK L PK QA+S+YERE LA++ A+QKW  YL    F I+TDQ+S
Sbjct: 886  IGAVLMQEHHPIAYISKSLGPKQQAMSVYERELLAIVYAVQKWGSYLSHAPFTIKTDQKS 945

Query: 1412 LKYLLDQRISTPMQQKWMTKLLGLDYEIEYKRGTENRAADALSRREGEDPLCIAITTVMP 1233
            +K++LDQ+++TP QQ W+ KLLG D++I+YK G+ N AADALSR+ G + L + ++    
Sbjct: 946  IKHMLDQKLNTPFQQVWVAKLLGFDFDIQYKEGSSNVAADALSRKMGAELLALMMSNASH 1005

Query: 1232 SWVQQVMQSYNQDPYFSNII 1173
               + +  ++ QDPY  +II
Sbjct: 1006 DLWESINLAWQQDPYLKDII 1025


>dbj|BAF19594.2| Os06g0493000 [Oryza sativa Japonica Group]
          Length = 866

 Score =  427 bits (1099), Expect(2) = 0.0
 Identities = 202/368 (54%), Positives = 263/368 (71%)
 Frame = -1

Query: 1108 IGNDSQLRELILSEMHNFPTGGHSGINGTYMRLKGIFYWPGMKEDVMSWVKSCDVCARNK 929
            +G  + LRE +L   H+   GGHSG   TY R+K +FYWPGMK  V  +VK+C VC +NK
Sbjct: 439  VGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQLFYWPGMKLAVTQFVKACPVCQKNK 498

Query: 928  PDSGPYPGLLQPLPIPSQAWTHISMDFIEGLPNSGGKNVILVIVDRFTKYAHFLALSHPF 749
             +     GLLQPLP+P  AW+HI+MDF+EGLP S GK+VI VIVDRFTKYAHF+ LSHPF
Sbjct: 499  TEHNMPAGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDVIWVIVDRFTKYAHFIPLSHPF 558

Query: 748  TAQGVAKLFLDTIYRLHGQPLSIVTDRDKVFTSSFWKELFKLMGTKLDMSSAYHPQSDGQ 569
            TA  +   FL+  Y+LHG P  IV+DRD++FTSS WKE+F+  G KL  SSAYHPQ+DGQ
Sbjct: 559  TADQILTQFLEHFYKLHGLPTVIVSDRDRIFTSSTWKEVFEKAGVKLHFSSAYHPQTDGQ 618

Query: 568  TERLNQCLENYLRCMIHTTPKKWLQWLPLAEFWYNTNYHTSMKLTPFQALYGYAPPLHFM 389
            +ER+NQCLENYLRCM  + P+KW   LP AE+WYNT +HTS+ ++P+QAL+G  PPL   
Sbjct: 619  SERVNQCLENYLRCMTSSKPRKWKALLPHAEWWYNTTFHTSLGMSPYQALHGIKPPLLAE 678

Query: 388  GAYLDSTNEEAKDTLRERQLIIETLRGNLLHAQNRMKVYADRHRQKREFEVGEFVYLKLQ 209
                 S  E  ++    +  ++ET++ +L+ AQ RMK +AD+HRQ+R  EVG+ VYLK+Q
Sbjct: 679  LLLPGSLLEGERNKQEAKAALLETIKSHLVKAQARMKYFADQHRQERTLEVGDMVYLKMQ 738

Query: 208  PFRQNSVEFRKNLKFESKYYGPYLILEKVGKVAYKLELPEGSRIHPVFHVSLLKKCLGQK 29
            P+R NS+    +LK  S+YYGP+ +LE++G VAYKL LP  S+IH VFHVS LKK LG +
Sbjct: 739  PYRHNSLGLHSSLKLHSRYYGPFRVLERIGSVAYKLLLPVTSQIHHVFHVSQLKKHLGSR 798

Query: 28   HLPSSELP 5
             +P   LP
Sbjct: 799  AVPEQGLP 806



 Score =  313 bits (801), Expect(2) = 0.0
 Identities = 155/338 (45%), Positives = 217/338 (64%)
 Frame = -3

Query: 2132 IVQCPCYFPVTNESSFQRVSKEICIGVFDDILVYSPTWEXXXXXXXXXXXXLRENQLYSK 1953
            +   P  F            ++  +  FDDIL+YS +              LR +QL++K
Sbjct: 94   LTNAPATFQALMNKILAPYLRKFVLVFFDDILIYSKSATEHAQHLSLVLQLLRHHQLFAK 153

Query: 1952 RSKCQFGQAQV*YLGHIISKEGVVTDPNKISCMTQWPTPTTVKQLRGFLGLTGYYRKFVK 1773
             SKC FGQ QV YLG+IIS  GV TDP K+  +  WPTPT++ +LRGFLGL GYYR+F+K
Sbjct: 154  PSKCVFGQDQVEYLGYIISSSGVATDPVKVQAVQNWPTPTSITELRGFLGLAGYYRRFIK 213

Query: 1772 DYGLLSRPLTNLLKKDSFQWTQEADDAFRELKTTMCSSPVLALPDFSKPFILETDASGTG 1593
            ++G++ RP+ + LKK++F W +    AF  +K  +  +PVLA+PDFS PFILE DASG G
Sbjct: 214  NFGIICRPMFDALKKNNFHWQEVQQQAFDAIKLQLAQAPVLAMPDFSLPFILEADASGHG 273

Query: 1592 VGAVLMQQGRPIAFMSKVLCPKNQALSIYEREFLAVLMAIQKWRHYLQGHKFIIRTDQQS 1413
            +GAVLMQ GRP+A++SK + PK  ALS Y++E LA+L A++KW+HY  G   IIRTDQ S
Sbjct: 274  IGAVLMQNGRPLAYLSKAIGPKAAALSTYDKEALAILEALKKWKHYFLGTSLIIRTDQAS 333

Query: 1412 LKYLLDQRISTPMQQKWMTKLLGLDYEIEYKRGTENRAADALSRREGEDPLCIAITTVMP 1233
            LKY+ +QRI+  +Q K + KLL  DY+IEYK+G EN+AADALSR +  + L    T ++P
Sbjct: 334  LKYINEQRITEGVQHKLLIKLLSYDYKIEYKKGQENKAADALSRMQQLNAL--TTTVIVP 391

Query: 1232 SWVQQVMQSYNQDPYFSNIIASKTLDPTTFPDFDIT*G 1119
             W+ +V  SY+ DP    + +   + P + P + +  G
Sbjct: 392  QWITEVAASYSTDPKCHELESHLHIAPQSHPPYTLKGG 429


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana]
 dbj|BAB03109.1| retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  420 bits (1079), Expect(2) = 0.0
 Identities = 195/365 (53%), Positives = 263/365 (72%), Gaps = 4/365 (1%)
 Frame = -1

Query: 1099 DSQLRELILSEMHNFPTGGHSGINGTYMRLKGIFYWPGMKEDVMSWVKSCDVCARNKPDS 920
            +  ++  IL  +H    GGHSG + T+ R+KG+FYW GM +D+ ++++SC  C + K D 
Sbjct: 1077 NDNIKNTILLWLHGSGVGGHSGRDVTHQRVKGLFYWKGMIKDIQAYIRSCGTCQQCKSDP 1136

Query: 919  GPYPGLLQPLPIPSQAWTHISMDFIEGLPNSGGKNVILVIVDRFTKYAHFLALSHPFTAQ 740
               PGLLQPLPIP   W+ +SMDFIEGLP SGGK VI+V+VDR +K AHF+ALSHP++A 
Sbjct: 1137 AASPGLLQPLPIPDTIWSEVSMDFIEGLPVSGGKTVIMVVVDRLSKAAHFIALSHPYSAL 1196

Query: 739  GVAKLFLDTIYRLHGQPLSIVTDRDKVFTSSFWKELFKLMGTKLDMSSAYHPQSDGQTER 560
             VA  +LD +++LHG P SIV+DRD VFTS FW+E F L G  L ++SAYHPQSDGQTE 
Sbjct: 1197 TVAHAYLDNVFKLHGCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEV 1256

Query: 559  LNQCLENYLRCMIHTTPKKWLQWLPLAEFWYNTNYHTSMKLTPFQALYGYAPPLHFMGAY 380
            +N+CLE YLRCM H  P+ W +WL LAE+WYNTNYH+S ++TPF+ +YG  PP+H     
Sbjct: 1257 VNRCLETYLRCMCHDRPQLWSKWLALAEYWYNTNYHSSSRMTPFEIVYGQVPPVHLPYLP 1316

Query: 379  LDSTNEEAKDTLRERQLIIETLRGNLLHAQNRMKVYADRHRQKREFEVGEFVYLKLQPFR 200
             +S       +L+ER+ ++  L+ +L+ AQ+RMK +AD+HR +REFE+G++VY+KLQP+R
Sbjct: 1317 GESKVAVVARSLQEREDMLLFLKFHLMRAQHRMKQFADQHRTEREFEIGDYVYVKLQPYR 1376

Query: 199  QNSVEFRKNLKFESKYYGPYLILEKVGKVAYKLELPEGSRIHPVFHVSLLKKCLGQ---- 32
            Q SV  R N K   KY+GPY I+++ G+VAYKL LP  S++HPVFHVS LK  +G     
Sbjct: 1377 QQSVVMRANQKLSPKYFGPYKIIDRCGEVAYKLALPSYSQVHPVFHVSQLKVLVGNVSTT 1436

Query: 31   KHLPS 17
             HLPS
Sbjct: 1437 VHLPS 1441



 Score =  320 bits (820), Expect(2) = 0.0
 Identities = 158/327 (48%), Positives = 217/327 (66%)
 Frame = -3

Query: 2132 IVQCPCYFPVTNESSFQRVSKEICIGVFDDILVYSPTWEXXXXXXXXXXXXLRENQLYSK 1953
            +   P  F       F+   ++  +  FDDILVYS + E            +R N+L++K
Sbjct: 727  LTNAPATFQGLMNFIFKPFLRKFVLVFFDDILVYSSSLEEHRQHLKQVFEVMRANKLFAK 786

Query: 1952 RSKCQFGQAQV*YLGHIISKEGVVTDPNKISCMTQWPTPTTVKQLRGFLGLTGYYRKFVK 1773
             SKC F   +V YLGH IS +G+ TDP KI  + +WP PTT+KQLRGFLGL GYYR+FV+
Sbjct: 787  LSKCAFAVPKVEYLGHFISAQGIETDPAKIKAVKEWPQPTTLKQLRGFLGLAGYYRRFVR 846

Query: 1772 DYGLLSRPLTNLLKKDSFQWTQEADDAFRELKTTMCSSPVLALPDFSKPFILETDASGTG 1593
             +G+++ PL  L K D+F+WT  A  AF +LK  +C +PVL+LP F K F++ETDA G G
Sbjct: 847  SFGVIAGPLHALTKTDAFEWTAVAQQAFEDLKAALCQAPVLSLPLFDKQFVVETDACGQG 906

Query: 1592 VGAVLMQQGRPIAFMSKVLCPKNQALSIYEREFLAVLMAIQKWRHYLQGHKFIIRTDQQS 1413
            +GAVLMQ+G P+A++S+ L  K   LSIYE+E LAV+ A++KWRHYL    FII+TDQ+S
Sbjct: 907  IGAVLMQEGHPLAYISRQLKGKQLHLSIYEKELLAVIFAVRKWRHYLLQSHFIIKTDQRS 966

Query: 1412 LKYLLDQRISTPMQQKWMTKLLGLDYEIEYKRGTENRAADALSRREGEDPLCIAITTVMP 1233
            LKYLL+QR++TP+QQ+W+ KLL  DYEI+Y++G EN  ADALSR EG + L +A+T V  
Sbjct: 967  LKYLLEQRLNTPIQQQWLPKLLEFDYEIQYRQGKENVVADALSRVEGSEVLHMAMTVVEC 1026

Query: 1232 SWVQQVMQSYNQDPYFSNIIASKTLDP 1152
              ++ +   Y  D    +II +   DP
Sbjct: 1027 DLLKDIQAGYANDSQLQDIITALQRDP 1053


>gb|PKA46982.1| putative mitochondrial protein [Apostasia shenzhenica]
          Length = 1535

 Score =  423 bits (1087), Expect(2) = 0.0
 Identities = 194/364 (53%), Positives = 268/364 (73%)
 Frame = -1

Query: 1120 GRLGIGNDSQLRELILSEMHNFPTGGHSGINGTYMRLKGIFYWPGMKEDVMSWVKSCDVC 941
            G+L IG+D  LR+ ++  +H    GGHSG   T  +LK +F+W GM +    +++ C+VC
Sbjct: 1093 GKLVIGSDFALRQQLIQMIHMGSMGGHSGFIPTLHKLKSMFHWKGMGKATKIFIQECNVC 1152

Query: 940  ARNKPDSGPYPGLLQPLPIPSQAWTHISMDFIEGLPNSGGKNVILVIVDRFTKYAHFLAL 761
             +NK ++    G LQPLPIP + WT++SMDFIEGLP S GK+ I V+VDR +KYAHF+AL
Sbjct: 1153 QQNKYETSSKSGPLQPLPIPEKVWTNVSMDFIEGLPKSNGKDTIFVVVDRLSKYAHFMAL 1212

Query: 760  SHPFTAQGVAKLFLDTIYRLHGQPLSIVTDRDKVFTSSFWKELFKLMGTKLDMSSAYHPQ 581
            +HPF+A  VA+ +LD +Y+LHG P  IV+DRDK+F S FW+EL KL+  ++ MS+AYHPQ
Sbjct: 1213 AHPFSATTVAQAYLDNVYKLHGMPEKIVSDRDKIFLSRFWQELLKLLKVQVQMSTAYHPQ 1272

Query: 580  SDGQTERLNQCLENYLRCMIHTTPKKWLQWLPLAEFWYNTNYHTSMKLTPFQALYGYAPP 401
            +DGQTE +N+CLE YLRCM    PK+WL+WLPL+E+WYNTNYH+S+K +P++ LYG  PP
Sbjct: 1273 TDGQTEVVNRCLETYLRCMTVERPKEWLKWLPLSEWWYNTNYHSSLKCSPYEVLYGQKPP 1332

Query: 400  LHFMGAYLDSTNEEAKDTLRERQLIIETLRGNLLHAQNRMKVYADRHRQKREFEVGEFVY 221
            LH       +  +    +L+ R+  I+ L+ +LL A NRMKV AD+HR++REFEVG+ VY
Sbjct: 1333 LHVPYLAGTAVVDAVDRSLQSRENFIKLLKHHLLQAMNRMKVQADKHRKEREFEVGDLVY 1392

Query: 220  LKLQPFRQNSVEFRKNLKFESKYYGPYLILEKVGKVAYKLELPEGSRIHPVFHVSLLKKC 41
            +KLQP+RQ+SV  R + K   KY+GP+ IL KVG VAYKL+LP+ ++IHPVFHVS+LKK 
Sbjct: 1393 VKLQPYRQDSVSHRMSRKLAPKYFGPFEILAKVGTVAYKLKLPDDAKIHPVFHVSILKKS 1452

Query: 40   LGQK 29
            +  +
Sbjct: 1453 ISNR 1456



 Score =  314 bits (805), Expect(2) = 0.0
 Identities = 160/322 (49%), Positives = 215/322 (66%), Gaps = 2/322 (0%)
 Frame = -3

Query: 2132 IVQCPCYFPVTNESSFQRVSKEICIGVFDDILVYSPTWEXXXXXXXXXXXXLRENQLYSK 1953
            +   P  F     S F+   +   +  FDDILVYS TW+            L  + L  K
Sbjct: 748  LTNAPVTFQKLMNSIFKPYLRIFVLVFFDDILVYSRTWDEHLHHLKTVLDVLATHSLKVK 807

Query: 1952 RSKCQFGQAQV*YLGHIISKEGVVTDPNKISCMTQWPTPTTVKQLRGFLGLTGYYRKFVK 1773
            R+KC F    + YLGH IS  GV TDPNKI  + +WP P++V++LRGFLGL GYYR+F+K
Sbjct: 808  RNKCDFAVQSIEYLGHCISSRGVSTDPNKIRAIVEWPKPSSVRELRGFLGLAGYYRRFIK 867

Query: 1772 DYGLLSRPLTNLLKKDSFQWTQEADDAFRELKTTMCSSPVLALPDFSKPFILETDASGTG 1593
            DYG +SR LT LLKKD+F+W  +A+ +F +LK  +   PVLALPDF++PF++ETDA G G
Sbjct: 868  DYGKISRGLTELLKKDAFKWDSQAEVSFSQLKQQLSQPPVLALPDFTQPFVVETDACGAG 927

Query: 1592 VGAVLMQQGRPIAFMSKVLCPKNQALSIYEREFLAVLMAIQKWRHYLQGHKFIIRTDQQS 1413
            +GAVLMQ GRPIA+ SK L  K+Q L +Y++E LA++ AIQKWR YL G+ F ++TD QS
Sbjct: 928  IGAVLMQSGRPIAYFSKGLSTKHQQLPVYDKEMLAIVAAIQKWRPYLLGNHFKVKTDHQS 987

Query: 1412 LKYLLDQRISTPMQQKWMTKLLGLDYEIEYKRGTENRAADALSRREGEDPLCI-AITTVM 1236
            L++LL+QRI+TP QQKW++KL G D+EI Y++G EN AADALSRR     + + A+   M
Sbjct: 988  LRFLLEQRITTPTQQKWLSKLAGYDFEIIYRKGQENIAADALSRRTQTASITLNAVLEGM 1047

Query: 1235 PS-WVQQVMQSYNQDPYFSNII 1173
            P+  +  V  S+N D    +II
Sbjct: 1048 PTELLNGVRNSWNLDAKLLDII 1069