BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00005216
         (1382 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNY16050.1| ribonuclease H, partial [Trifolium pratense]           427   e-136
gb|PNY02790.1| ribonuclease H, partial [Trifolium pratense]           416   e-133
gb|PNX95563.1| ribonuclease H, partial [Trifolium pratense]           422   e-133
gb|PNX98065.1| ribonuclease H [Trifolium pratense]                    416   e-132
gb|PNY02482.1| ribonuclease H, partial [Trifolium pratense]           416   e-131
gb|PRQ55763.1| putative RNA-directed DNA polymerase [Rosa chinen...   414   e-130
gb|PNX80752.1| ribonuclease H, partial [Trifolium pratense]           397   e-128
ref|XP_024172006.1| uncharacterized protein LOC112178017 [Rosa c...   403   e-127
gb|PNX96384.1| ribonuclease H, partial [Trifolium pratense]           409   e-127
gb|PNY03092.1| ribonuclease H [Trifolium pratense]                    400   e-127
gb|PNX92808.1| ribonuclease H [Trifolium pratense]                    397   e-126
gb|PNY15111.1| ribonuclease H [Trifolium pratense]                    405   e-125
ref|XP_024195790.1| uncharacterized protein LOC112198938 [Rosa c...   400   e-125
gb|PNY14301.1| ribonuclease H [Trifolium pratense]                    396   e-123
gb|PNX71213.1| ribonuclease H [Trifolium pratense]                    390   e-123
gb|PNY16580.1| ribonuclease H, partial [Trifolium pratense]           387   e-122
ref|XP_023920731.1| uncharacterized protein LOC112032201 [Quercu...   396   e-122
ref|XP_024037590.1| uncharacterized protein LOC112097210 [Citrus...   392   e-122
ref|XP_021760550.1| uncharacterized protein LOC110725370 [Chenop...   388   e-121
gb|PRQ21155.1| putative RNA-directed DNA polymerase [Rosa chinen...   381   e-121

>gb|PNY16050.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1066

 Score =  427 bits (1098), Expect = e-136
 Identities = 206/445 (46%), Positives = 289/445 (64%), Gaps = 1/445 (0%)
 Frame = -1

Query: 1382 ISHLFFADDSIIFGRANMKEIEVIKNIISTYGEASGQMVNFEKSELNFSRGIPHTLAQSL 1203
            ISHLFFADDS+IF R+N KE+  I+NII TY +ASGQ+VN  KSE+ FS+G+P+   Q +
Sbjct: 584  ISHLFFADDSLIFCRSNTKEVSTIQNIIQTYQKASGQLVNLAKSEMVFSKGVPNNTKQDV 643

Query: 1202 ANQLGVQLVDKHAIYLGIPATVGRSKKSLFQGIIDRVNKKLKDWKAKTLSTAGKIVLIKS 1023
            +N L +Q+ ++ + YLG+P  +GRSKK +F  I +++ KKLK WK K LS AG+  LIK+
Sbjct: 644  SNILPMQIQNQFSKYLGMPIALGRSKKQIFNFIQEKIWKKLKGWKEKHLSFAGRGTLIKA 703

Query: 1022 VAQAIPTYLMSCFLIPKGVCQKINSLIARFWWGQRRDERRIHWISWRKLCTGKKEGGLGF 843
            VAQAIPTYLMS FL+PKGVC ++  +I  FWWG   D R+IHWI W K+CT KK+GG+GF
Sbjct: 704  VAQAIPTYLMSSFLMPKGVCDQLEQMICNFWWGSSTDHRKIHWIKWSKVCTQKKQGGMGF 763

Query: 842  RDIEAFNKAMLAKQGWRLLNDDNSLLARTLKARYYPHDTFLNAMKSYNPSFTWQSIMASK 663
            R++ AFN+A+LAKQGWRL+   NSL+ + LKA+YYP   FL A    N S+TW+SI+ + 
Sbjct: 764  RNLRAFNEALLAKQGWRLITQPNSLVTQILKAKYYPKGDFLTATHKQNMSYTWRSILQAS 823

Query: 662  EVLLQGLRWRIGDGEKTRVWLDPWLQECRNFRPSRNNQDWPMDLKVSELMLPGRREWNSE 483
             V+ +G  W IG G+   +W D W+Q+  N   + +  +     KV ELM     EWN+ 
Sbjct: 824  WVIKKGSYWTIGSGQDINIWEDNWIQQKGNSTGTSSKPNNCGFTKVKELMDNNYNEWNAS 883

Query: 482  AIHEIFSETEAKQILSIPLRNSGGIDRLVWHYSTNGFYSVKSGYQIALS-IDRATDNAPS 306
             I+++F+  EA  IL IP+ +    D L W  + +G YSVKSGY   +   + +  N  +
Sbjct: 884  IINQVFNPYEAHMILQIPILDKTQPDTLTWDGTRDGTYSVKSGYHAIIDWANNSNSNNAT 943

Query: 305  HSGPISKIWRWIWQLNVPPKVQVFLWKATNGILPVGQNLIKKRVDVNPYCIRCHDHMETA 126
             S    +IW+ +W+LNVPPK    +W++    +PV  +L K+ +  +P C RC DH+ET 
Sbjct: 944  SSNCSMEIWKVLWKLNVPPKHSHLIWRSLRNAIPVKGSLFKRGIRCDPLCPRCLDHVETI 1003

Query: 125  EHALRDCAWSNFYWRASLLRLDSQL 51
            +H   DC W+   W AS L L+  L
Sbjct: 1004 QHVFMDCEWTKKVWFASPLTLNLNL 1028


>gb|PNY02790.1| ribonuclease H, partial [Trifolium pratense]
          Length = 916

 Score =  416 bits (1068), Expect = e-133
 Identities = 202/442 (45%), Positives = 287/442 (64%), Gaps = 1/442 (0%)
 Frame = -1

Query: 1382 ISHLFFADDSIIFGRANMKEIEVIKNIISTYGEASGQMVNFEKSELNFSRGIPHTLAQSL 1203
            ISHLFFADDS++F RAN KE+  I+NII  Y  ASGQ+VNF KSE+ FS+G+ + + + +
Sbjct: 319  ISHLFFADDSLVFCRANTKEVSTIQNIIQIYQNASGQLVNFSKSEMVFSKGVSNQIQRDI 378

Query: 1202 ANQLGVQLVDKHAIYLGIPATVGRSKKSLFQGIIDRVNKKLKDWKAKTLSTAGKIVLIKS 1023
            +N L ++++++ + YLG+P  +GRSKK +F  I +++ KKLK WK K LS AG+  LIK+
Sbjct: 379  SNILPMKILNQFSKYLGMPVALGRSKKQIFNFIQEKIWKKLKGWKEKHLSFAGRGTLIKA 438

Query: 1022 VAQAIPTYLMSCFLIPKGVCQKINSLIARFWWGQRRDERRIHWISWRKLCTGKKEGGLGF 843
            VAQAIPTYLMS FL+PKGVC ++  +I  FWWG   D R+IHWI W  +C  K EGG+GF
Sbjct: 439  VAQAIPTYLMSSFLLPKGVCDQLEKMICNFWWGSSTDHRKIHWIKWSTVCKHKMEGGIGF 498

Query: 842  RDIEAFNKAMLAKQGWRLLNDDNSLLARTLKARYYPHDTFLNAMKSYNPSFTWQSIMASK 663
            RD+ AFN+A+LAKQGWRL+   +SL+A+ LKA+YYP   FL A      S+TW+SI+ + 
Sbjct: 499  RDLRAFNEALLAKQGWRLITQPDSLVAKILKAKYYPKGEFLKASHKQQMSYTWKSILQAS 558

Query: 662  EVLLQGLRWRIGDGEKTRVWLDPWLQECRNFRPSRNNQDWPMDLKVSELMLPGRREWNSE 483
             V+ +G  W IG G+   +W D W+Q+  N   + +  +    +KV ELM     +WN  
Sbjct: 559  WVIKRGSYWTIGSGQGINIWEDNWIQQKGNPTSTISKPNNCGLIKVKELMDDNYNDWNVT 618

Query: 482  AIHEIFSETEAKQILSIPLRNSGGIDRLVWHYSTNGFYSVKSGYQIALSIDRATDNAPSH 303
             I++IF+  EA  I  IP+ +    D L W  + +G YSVKSGYQ  +   + +DN  + 
Sbjct: 619  IINQIFNPYEAHMIQQIPILDKTQSDILTWDGTRDGHYSVKSGYQAIMEWAKNSDNNNAT 678

Query: 302  SGPIS-KIWRWIWQLNVPPKVQVFLWKATNGILPVGQNLIKKRVDVNPYCIRCHDHMETA 126
            S   S +IW+ +W+LNVPPK   F+W+  +  +PV   L KK +  +P C RC +H+ET 
Sbjct: 679  SSNSSMEIWKVLWKLNVPPKHSHFIWRCLSNAIPVKGKLFKKGIRCDPLCPRCLNHVETI 738

Query: 125  EHALRDCAWSNFYWRASLLRLD 60
            +H   +C W+   W AS L L+
Sbjct: 739  QHVFLECDWAKKVWFASPLTLN 760


>gb|PNX95563.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1188

 Score =  422 bits (1084), Expect = e-133
 Identities = 209/452 (46%), Positives = 293/452 (64%), Gaps = 6/452 (1%)
 Frame = -1

Query: 1382 ISHLFFADDSIIFGRANMKEIEVIKNIISTYGEASGQMVNFEKSELNFSRGIPHTLAQSL 1203
            ISHLFFADDS++F RA  KE+  I++II TY +ASGQ+VN  KSE+ FS+G+ + + + +
Sbjct: 498  ISHLFFADDSLMFCRATNKEVSTIQDIIQTYQKASGQLVNLTKSEMVFSKGVTNGIKEEI 557

Query: 1202 ANQLGVQLVDKHAIYLGIPATVGRSKKSLFQGIIDRVNKKLKDWKAKTLSTAGKIVLIKS 1023
            +  L +Q+ +  + YLG+P   GRSK+ +F  I +++ KKLK WK K LS AG+  LIK+
Sbjct: 558  SRILPMQISEYFSKYLGMPIVHGRSKQQIFNYIREKIWKKLKGWKEKNLSFAGRGTLIKA 617

Query: 1022 VAQAIPTYLMSCFLIPKGVCQKINSLIARFWWGQRRDERRIHWISWRKLCTGKKEGGLGF 843
            VAQAIPTYLMSCFLIPKGVC+++  +I  FWWG   D+R++HW+ W K+C  K+ GGLGF
Sbjct: 618  VAQAIPTYLMSCFLIPKGVCEQLEKMICNFWWGSTTDQRKMHWLKWSKVCNQKRNGGLGF 677

Query: 842  RDIEAFNKAMLAKQGWRLLNDDNSLLARTLKARYYPHDTFLNAMKSYNPSFTWQSIMASK 663
            RD+ AFN+A+LAKQGWRL+    SL+A+ LKA+Y+P+++FLNA      S+TW+SIM + 
Sbjct: 678  RDLRAFNEALLAKQGWRLITKPTSLVAQVLKAKYFPNESFLNAKHKQVMSYTWRSIMQAS 737

Query: 662  EVLLQGLRWRIGDGEKTRVWLDPWLQE---CRNFRPSRNNQDWPMDLKVSELMLPGRREW 492
             V+ +G  W IGDGE   +W D W+Q+       RP  NN +    +KV ELM     EW
Sbjct: 738  WVIKRGSYWSIGDGEDINIWEDNWMQQKSATYKGRPKPNNLNL---IKVKELMDSNYNEW 794

Query: 491  NSEAIHEIFSETEAKQILSIPLRNSGGIDRLVWHYSTNGFYSVKSGYQIALSIDRATDNA 312
            N++ I+++F   EA+ IL+IP+ +    D L W  + +G YSVKSGY   +      + +
Sbjct: 795  NTDIINQVFLPYEAQMILNIPIIDKTQPDMLTWDCTQDGQYSVKSGYHAIMEWGNLPNAS 854

Query: 311  PSHSGPISKIWRWIWQLNVPPKVQVFLWKATNGILPVGQNLIKKRVDVNPYCIRCHDHME 132
            PS++     IW  +W+L VPPK    LW+  +  LPV  NL K+ V  +P C RC + ME
Sbjct: 855  PSNNS--QHIWNVLWKLKVPPKHSHLLWRVLHNALPVKNNLFKRGVRCDPLCPRCSNSME 912

Query: 131  TAEHALRDCAWSNFYWRASLLRLD---SQLVD 45
            T  H   DC W+   W AS L L+   +QL D
Sbjct: 913  TIHHVFLDCEWAKQTWFASALTLNLGQNQLTD 944


>gb|PNX98065.1| ribonuclease H [Trifolium pratense]
          Length = 1011

 Score =  416 bits (1068), Expect = e-132
 Identities = 202/442 (45%), Positives = 287/442 (64%), Gaps = 1/442 (0%)
 Frame = -1

Query: 1382 ISHLFFADDSIIFGRANMKEIEVIKNIISTYGEASGQMVNFEKSELNFSRGIPHTLAQSL 1203
            ISHLFFADDS++F RAN KE+  I+NII  Y  ASGQ+VNF KSE+ FS+G+ + + + +
Sbjct: 319  ISHLFFADDSLVFCRANTKEVSTIQNIIQIYQNASGQLVNFSKSEMVFSKGVSNQIQRDI 378

Query: 1202 ANQLGVQLVDKHAIYLGIPATVGRSKKSLFQGIIDRVNKKLKDWKAKTLSTAGKIVLIKS 1023
            +N L ++++++ + YLG+P  +GRSKK +F  I +++ KKLK WK K LS AG+  LIK+
Sbjct: 379  SNILPMKILNQFSKYLGMPVALGRSKKQIFNFIQEKIWKKLKGWKEKHLSFAGRGTLIKA 438

Query: 1022 VAQAIPTYLMSCFLIPKGVCQKINSLIARFWWGQRRDERRIHWISWRKLCTGKKEGGLGF 843
            VAQAIPTYLMS FL+PKGVC ++  +I  FWWG   D R+IHWI W  +C  K EGG+GF
Sbjct: 439  VAQAIPTYLMSSFLLPKGVCDQLEKMICNFWWGSSTDHRKIHWIKWSTVCKHKMEGGIGF 498

Query: 842  RDIEAFNKAMLAKQGWRLLNDDNSLLARTLKARYYPHDTFLNAMKSYNPSFTWQSIMASK 663
            RD+ AFN+A+LAKQGWRL+   +SL+A+ LKA+YYP   FL A      S+TW+SI+ + 
Sbjct: 499  RDLRAFNEALLAKQGWRLITQPDSLVAKILKAKYYPKGEFLKASHKQQMSYTWKSILQAS 558

Query: 662  EVLLQGLRWRIGDGEKTRVWLDPWLQECRNFRPSRNNQDWPMDLKVSELMLPGRREWNSE 483
             V+ +G  W IG G+   +W D W+Q+  N   + +  +    +KV ELM     +WN  
Sbjct: 559  WVIKRGSYWTIGSGQGINIWEDNWIQQKGNPTSTISKPNNCGLIKVKELMDDNYNDWNVT 618

Query: 482  AIHEIFSETEAKQILSIPLRNSGGIDRLVWHYSTNGFYSVKSGYQIALSIDRATDNAPSH 303
             I++IF+  EA  I  IP+ +    D L W  + +G YSVKSGYQ  +   + +DN  + 
Sbjct: 619  IINQIFNPYEAHMIQQIPILDKTQSDILTWDGTRDGHYSVKSGYQAIMEWAKNSDNNNAT 678

Query: 302  SGPIS-KIWRWIWQLNVPPKVQVFLWKATNGILPVGQNLIKKRVDVNPYCIRCHDHMETA 126
            S   S +IW+ +W+LNVPPK   F+W+  +  +PV   L KK +  +P C RC +H+ET 
Sbjct: 679  SSNSSMEIWKVLWKLNVPPKHSHFIWRCLSNAIPVKGKLFKKGIRCDPLCPRCLNHVETI 738

Query: 125  EHALRDCAWSNFYWRASLLRLD 60
            +H   +C W+   W AS L L+
Sbjct: 739  QHVFLECDWAKKVWFASPLTLN 760


>gb|PNY02482.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1070

 Score =  416 bits (1068), Expect = e-131
 Identities = 202/442 (45%), Positives = 287/442 (64%), Gaps = 1/442 (0%)
 Frame = -1

Query: 1382 ISHLFFADDSIIFGRANMKEIEVIKNIISTYGEASGQMVNFEKSELNFSRGIPHTLAQSL 1203
            ISHLFFADDS++F RAN KE+  I+NII  Y  ASGQ+VNF KSE+ FS+G+ + + + +
Sbjct: 473  ISHLFFADDSLVFCRANTKEVSTIQNIIQIYQNASGQLVNFSKSEMVFSKGVSNQIQRDI 532

Query: 1202 ANQLGVQLVDKHAIYLGIPATVGRSKKSLFQGIIDRVNKKLKDWKAKTLSTAGKIVLIKS 1023
            +N L ++++++ + YLG+P  +GRSKK +F  I +++ KKLK WK K LS AG+  LIK+
Sbjct: 533  SNILPMKILNQFSKYLGMPVALGRSKKQIFNFIQEKIWKKLKGWKEKHLSFAGRGTLIKA 592

Query: 1022 VAQAIPTYLMSCFLIPKGVCQKINSLIARFWWGQRRDERRIHWISWRKLCTGKKEGGLGF 843
            VAQAIPTYLMS FL+PKGVC ++  +I  FWWG   D R+IHWI W  +C  K EGG+GF
Sbjct: 593  VAQAIPTYLMSSFLLPKGVCDQLEKMICNFWWGSSTDHRKIHWIKWSTVCKHKMEGGIGF 652

Query: 842  RDIEAFNKAMLAKQGWRLLNDDNSLLARTLKARYYPHDTFLNAMKSYNPSFTWQSIMASK 663
            RD+ AFN+A+LAKQGWRL+   +SL+A+ LKA+YYP   FL A      S+TW+SI+ + 
Sbjct: 653  RDLRAFNEALLAKQGWRLITQPDSLVAKILKAKYYPKGEFLKASHKQQMSYTWKSILQAS 712

Query: 662  EVLLQGLRWRIGDGEKTRVWLDPWLQECRNFRPSRNNQDWPMDLKVSELMLPGRREWNSE 483
             V+ +G  W IG G+   +W D W+Q+  N   + +  +    +KV ELM     +WN  
Sbjct: 713  WVIKRGSYWTIGSGQGINIWEDNWIQQKGNPTSTISKPNNCGLIKVKELMDDNYNDWNVT 772

Query: 482  AIHEIFSETEAKQILSIPLRNSGGIDRLVWHYSTNGFYSVKSGYQIALSIDRATDNAPSH 303
             I++IF+  EA  I  IP+ +    D L W  + +G YSVKSGYQ  +   + +DN  + 
Sbjct: 773  IINQIFNPYEAHMIQQIPILDKTQSDILTWDGTRDGHYSVKSGYQAIMEWAKNSDNNNAT 832

Query: 302  SGPIS-KIWRWIWQLNVPPKVQVFLWKATNGILPVGQNLIKKRVDVNPYCIRCHDHMETA 126
            S   S +IW+ +W+LNVPPK   F+W+  +  +PV   L KK +  +P C RC +H+ET 
Sbjct: 833  SSNSSMEIWKVLWKLNVPPKHSHFIWRCLSNAIPVKGKLFKKGIRCDPLCPRCLNHVETI 892

Query: 125  EHALRDCAWSNFYWRASLLRLD 60
            +H   +C W+   W AS L L+
Sbjct: 893  QHVFLECDWAKKVWFASPLTLN 914


>gb|PRQ55763.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1228

 Score =  414 bits (1065), Expect = e-130
 Identities = 199/459 (43%), Positives = 292/459 (63%), Gaps = 3/459 (0%)
 Frame = -1

Query: 1382 ISHLFFADDSIIFGRANMKEIEVIKNIISTYGEASGQMVNFEKSELNFSRGIPHTLAQSL 1203
            ISHLFFADDS IF +A   E +V+K +   Y +ASGQM+NF+KS ++FS+ +       L
Sbjct: 527  ISHLFFADDSFIFFKAETDECDVLKRMFEQYEKASGQMINFDKSCVSFSKNVKRAKQDEL 586

Query: 1202 ANQLGVQLVDKHAIYLGIPATVGRSKKSLFQGIIDRVNKKLKDWKAKTLSTAGKIVLIKS 1023
            A  L V  VDKH  YLG+P  +  SK   F  + ++V K+ + W+AKTLS AGK ++IK+
Sbjct: 587  AASLRVLRVDKHDKYLGLPTEISYSKSEAFNFLSEKVRKRTQGWRAKTLSAAGKEIMIKA 646

Query: 1022 VAQAIPTYLMSCFLIPKGVCQKINSLIARFWWGQRRDERRIHWISWRKLCTGKKEGGLGF 843
            VAQ+IPTY+MSCF +PK +C +++ L+A+FWWG + ++++IHW++W KLC  K EGGLGF
Sbjct: 647  VAQSIPTYVMSCFELPKHLCLEMHRLMAQFWWGDKSNDKKIHWLAWEKLCVPKAEGGLGF 706

Query: 842  RDIEAFNKAMLAKQGWRLLNDDNSLLARTLKARYYPHDTFLNAMKSYNPSFTWQSIMASK 663
            R++  FN+A+LAKQGWR++ + NSLLAR  KA+Y+P+  F+ A  S   S+ W+SI+  +
Sbjct: 707  RNMVQFNQALLAKQGWRIIQNPNSLLARLYKAKYFPNCDFMKAEASSGSSYAWKSILFGR 766

Query: 662  EVLLQGLRWRIGDGEKTRVWLDPWLQECRNFRPSRNNQDWPMDLKVSELMLPGRREWNSE 483
            E+L +GLR ++G+G +  VW D WL    +FRP    ++    L+V EL+     EW+  
Sbjct: 767  ELLRKGLRLQVGNGSQIAVWTDQWLPLPHSFRPISTPKEGLETLRVDELIDQEENEWHMF 826

Query: 482  AIHEIFSETEAKQILSIPLRNSGGIDRLVWHYSTNGFYSVKSGYQIALSIDRATDNAPSH 303
             + E+F   E   I SIPL     +DR VWH+   G Y VKSGY IA  +D AT+ A   
Sbjct: 827  LLQELFMPLEVNLIASIPLSLRRPVDRWVWHHDKKGMYDVKSGYHIARIVDGATERASCS 886

Query: 302  SGPI---SKIWRWIWQLNVPPKVQVFLWKATNGILPVGQNLIKKRVDVNPYCIRCHDHME 132
            +GP+    K W+ +W   +PPKV++F+W+   GILP    L KK    +  C+ CH   E
Sbjct: 887  TGPVGLNGKYWKLVWHARIPPKVRMFIWRLLKGILPTKHELCKKVALPDFECVFCHGAGE 946

Query: 131  TAEHALRDCAWSNFYWRASLLRLDSQLVDTKSASITDFI 15
               H  RDC++   +W  +L  LD ++VD  +AS+ +++
Sbjct: 947  HGLHLFRDCSYIACFW--ALGELDLKVVDVMAASLEEWV 983


>gb|PNX80752.1| ribonuclease H, partial [Trifolium pratense]
          Length = 696

 Score =  397 bits (1021), Expect = e-128
 Identities = 193/437 (44%), Positives = 277/437 (63%), Gaps = 1/437 (0%)
 Frame = -1

Query: 1382 ISHLFFADDSIIFGRANMKEIEVIKNIISTYGEASGQMVNFEKSELNFSRGIPHTLAQSL 1203
            ISHL FADDS++F RA+  E +VI ++++ Y +ASGQ+VN +KSE++FS+ + +   + +
Sbjct: 237  ISHLLFADDSLLFARASSTEADVILSVLAEYQQASGQVVNLDKSEVSFSQNVRNEEKEMI 296

Query: 1202 ANQLGVQLVDKHAIYLGIPATVGRSKKSLFQGIIDRVNKKLKDWKAKTLSTAGKIVLIKS 1023
             N++GV+ VD H+ YLG+P   GRSKK +F  +IDRV KK+K WK   LS AGK +LIK+
Sbjct: 297  RNRMGVKTVDNHSKYLGLPVVFGRSKKLIFSLVIDRVWKKVKGWKENYLSRAGKEILIKA 356

Query: 1022 VAQAIPTYLMSCFLIPKGVCQKINSLIARFWWGQRRDERRIHWISWRKLCTGKKEGGLGF 843
            VAQAIP Y+MSC+ +P+  CQ+I S++A+FWWG +  +R+IHW+SW +L   KK GG+GF
Sbjct: 357  VAQAIPNYIMSCYKLPESCCQEIESMLAKFWWGSKEGKRKIHWMSWERLSKSKKGGGMGF 416

Query: 842  RDIEAFNKAMLAKQGWRLLNDDNSLLARTLKARYYPHDTFLNAMKSYNPSFTWQSIMASK 663
            R I  FN A+L K  WRL   + SL+ R  K+RYYP  +F+ A   Y PS+ W+SI ++K
Sbjct: 417  RGISNFNSALLGKHCWRLTTGEESLMGRVFKSRYYPRASFMEAKIGYQPSYAWRSIQSAK 476

Query: 662  EVLLQGLRWRIGDGEKTRVWLDPWLQECRNFRPSRNNQDWPMDLKVSELMLPGRREWNSE 483
            EV++ G RWRIG+GEK ++  D WL     F+      +   D  VS L+ P  ++W  +
Sbjct: 477  EVIILGSRWRIGNGEKVKICKDKWLPNQVGFKVWSRCDELEEDALVSTLIDPDTKQWKRD 536

Query: 482  AIHEIFSETEAKQILSIPLRNSGGIDRLVWHYSTNGFYSVKSGYQIALSIDRATDNAPSH 303
             +  IF   EAKQILS+P+      D+++WH+  NG YSV+S +   L    ++ NA   
Sbjct: 537  LVSHIFFPHEAKQILSLPISPRLPSDKIIWHFERNGEYSVRSAHH--LLKQHSSRNAAGT 594

Query: 302  SGPISKI-WRWIWQLNVPPKVQVFLWKATNGILPVGQNLIKKRVDVNPYCIRCHDHMETA 126
            SG  + I WR IW   VP +V+ FLW+    ILP   NL +K V V   C +C++  ET 
Sbjct: 595  SGQQTDILWREIWXAPVPNRVRNFLWRLGKNILPTRANLSRKGVQVENLCPQCNNAPETI 654

Query: 125  EHALRDCAWSNFYWRAS 75
            +H    C  +   W AS
Sbjct: 655  DHLFLHCQLAQLTWFAS 671


>ref|XP_024172006.1| uncharacterized protein LOC112178017 [Rosa chinensis]
          Length = 1045

 Score =  403 bits (1036), Expect = e-127
 Identities = 195/442 (44%), Positives = 282/442 (63%), Gaps = 2/442 (0%)
 Frame = -1

Query: 1382 ISHLFFADDSIIFGRANMKEIEVIKNIISTYGEASGQMVNFEKSELNFSRGIPHTLAQSL 1203
            ISHLFFADDS IF +A + +I  +++I   Y   SGQ +N+EKS ++FS+ +P      L
Sbjct: 292  ISHLFFADDSFIFSKAEITDILCMRDIFQKYEHMSGQQINYEKSCISFSKNVPRWKQDDL 351

Query: 1202 ANQLGVQLVDKHAIYLGIPATVGRSKKSLFQGIIDRVNKKLKDWKAKTLSTAGKIVLIKS 1023
            A  LGV  VDKH  YLG+P  +  SK   F  ++DRV  + + W+ KTLSTAGK VLIK+
Sbjct: 352  ARVLGVTRVDKHDKYLGLPTELSYSKDEAFWYLVDRVRTRTQGWRNKTLSTAGKEVLIKA 411

Query: 1022 VAQAIPTYLMSCFLIPKGVCQKINSLIARFWWGQRRDERRIHWISWRKLCTGKKEGGLGF 843
            V Q+IPTY+MSCF +PK +C +++ L+ARFWWG+  +ER+IHW++W KLC  KKEGGLGF
Sbjct: 412  VVQSIPTYVMSCFELPKHLCDEMHRLMARFWWGEFGEERKIHWVAWDKLCAPKKEGGLGF 471

Query: 842  RDIEAFNKAMLAKQGWRLLNDDNSLLARTLKARYYPHDTFLNAMKSYNPSFTWQSIMASK 663
            RD+  FN A+LAKQGWRL+   +SLLA+  KARY+P+  F++A+     SF+W+SIM  +
Sbjct: 472  RDMHLFNTALLAKQGWRLICRLDSLLAQVFKARYFPNTDFMHAVLHKGASFSWRSIMKGR 531

Query: 662  EVLLQGLRWRIGDGEKTRVWLDPWLQECRNFRPSRNNQDWPMDLKVSELMLPGRREWNSE 483
            ++L +GLR+++G+GE   +W DPW+     F+P         DL+V +L+     +W   
Sbjct: 532  DLLKKGLRFQVGNGEDISIWNDPWVPLPYRFKPFSIPMQGAEDLRVVDLIDEETGDWQEW 591

Query: 482  AIHEIFSETEAKQILSIPLRNSGGIDRLVWHYSTNGFYSVKSGYQIALSID--RATDNAP 309
             +HE+F+  E   I+ IPL  SGGIDRLVWH+   G YSVK+GY +A  +D    T +  
Sbjct: 592  LLHELFTPMEVVNIMKIPLSLSGGIDRLVWHFDKKGRYSVKNGYHVARVMDTLERTASGS 651

Query: 308  SHSGPISKIWRWIWQLNVPPKVQVFLWKATNGILPVGQNLIKKRVDVNPYCIRCHDHMET 129
            S     +++W  +W++NVPPKV++  W+   G LP    L K+    +  C+ C + +E 
Sbjct: 652  SFGADRARLWGKLWKVNVPPKVRMHAWRLVKGTLPTRAALAKRVQLSDVRCVYCSNGVED 711

Query: 128  AEHALRDCAWSNFYWRASLLRL 63
            + H  ++C     +W  S L L
Sbjct: 712  SLHLFKNCDALRTFWMHSSLEL 733


>gb|PNX96384.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1376

 Score =  409 bits (1052), Expect = e-127
 Identities = 199/444 (44%), Positives = 273/444 (61%), Gaps = 3/444 (0%)
 Frame = -1

Query: 1382 ISHLFFADDSIIFGRANMKEIEVIKNIISTYGEASGQMVNFEKSELNFSRGIPHTLAQSL 1203
            +SHLFFADDS+IF RAN KE+  I NII  Y  ASGQ+VN  KSE+ FS+G+     + +
Sbjct: 683  VSHLFFADDSLIFCRANKKEVSTINNIIQVYQNASGQLVNLAKSEMVFSKGVTTETKKDV 742

Query: 1202 ANQLGVQLVDKHAIYLGIPATVGRSKKSLFQGIIDRVNKKLKDWKAKTLSTAGKIVLIKS 1023
               L ++  +  + YLG+P   GRSKK +F  I +++ +KLK WK K LS AG+  LIK+
Sbjct: 743  TTILPMKTPEHFSKYLGMPIVYGRSKKQIFNHIKEKIWQKLKGWKEKNLSFAGRSTLIKA 802

Query: 1022 VAQAIPTYLMSCFLIPKGVCQKINSLIARFWWGQRRDERRIHWISWRKLCTGKKEGGLGF 843
            VAQAIPTYLMSCFLIPKG+C ++  +I  FWWG   D R++HW+ W  +CT K  GGLGF
Sbjct: 803  VAQAIPTYLMSCFLIPKGICDQLEKMICNFWWGSTTDHRKMHWVKWSNICTQKNNGGLGF 862

Query: 842  RDIEAFNKAMLAKQGWRLLNDDNSLLARTLKARYYPHDTFLNAMKSYNPSFTWQSIMASK 663
            RD+ AFN+A+LAKQ WRL+ +  SL+A+ LKA+YYP +  L+A  S N S+TW+SI+ + 
Sbjct: 863  RDLRAFNEALLAKQSWRLITNPTSLVAQVLKAKYYPKEDLLHAKYSKNMSYTWRSIIQTN 922

Query: 662  EVLLQGLRWRIGDGEKTRVWLDPWLQECRN---FRPSRNNQDWPMDLKVSELMLPGRREW 492
             ++ +G  W IG G+ T +W D W+Q+  +     P  NN +     KV ELM      W
Sbjct: 923  WIIKRGSYWTIGSGQNTNIWEDNWIQQASSTYKCNPKPNNLNL---TKVQELMDTNNNAW 979

Query: 491  NSEAIHEIFSETEAKQILSIPLRNSGGIDRLVWHYSTNGFYSVKSGYQIALSIDRATDNA 312
              + I++IF   EA+ IL IP+ +    D L W  + +G YSVKSGY   +      +  
Sbjct: 980  KEDIINQIFQPYEAQMILKIPIMDKAQPDTLTWDNTQDGIYSVKSGYHSIMEWSHTLNAT 1039

Query: 311  PSHSGPISKIWRWIWQLNVPPKVQVFLWKATNGILPVGQNLIKKRVDVNPYCIRCHDHME 132
             S++     +W+ IW+LNVPPK    LW+     LPV  NL K+ V  +P C RC + +E
Sbjct: 1040 TSNNS--QDLWKAIWKLNVPPKHTHLLWRVLKNALPVKNNLFKRGVRCDPLCPRCTNCLE 1097

Query: 131  TAEHALRDCAWSNFYWRASLLRLD 60
            T  H   DC W+   W AS L L+
Sbjct: 1098 TTNHVFLDCEWTKQVWFASSLNLN 1121


>gb|PNY03092.1| ribonuclease H [Trifolium pratense]
          Length = 970

 Score =  400 bits (1029), Expect = e-127
 Identities = 192/441 (43%), Positives = 276/441 (62%)
 Frame = -1

Query: 1382 ISHLFFADDSIIFGRANMKEIEVIKNIISTYGEASGQMVNFEKSELNFSRGIPHTLAQSL 1203
            ISHL FADDS+ F RA   E+  I NII TY EASGQ+VN  KSE+ FS+G+P+T+   +
Sbjct: 292  ISHLLFADDSLFFCRATTGEVNTISNIIQTYQEASGQLVNLTKSEMVFSKGVPNTIKDDI 351

Query: 1202 ANQLGVQLVDKHAIYLGIPATVGRSKKSLFQGIIDRVNKKLKDWKAKTLSTAGKIVLIKS 1023
            +  L +Q++D  + YLG+P  +GRSK             +LK WK + LS AG+ +LIK+
Sbjct: 352  SKILPIQILDHFSKYLGMPTFIGRSKN------------QLKGWKERNLSFAGRGILIKA 399

Query: 1022 VAQAIPTYLMSCFLIPKGVCQKINSLIARFWWGQRRDERRIHWISWRKLCTGKKEGGLGF 843
            VAQAIP Y+MS FLIPK VC ++  +I  FWWG   D R+IHWI+W+K+C  KK GGLGF
Sbjct: 400  VAQAIPNYIMSSFLIPKEVCAQMEKMICNFWWGSTTDSRKIHWINWQKICRQKKTGGLGF 459

Query: 842  RDIEAFNKAMLAKQGWRLLNDDNSLLARTLKARYYPHDTFLNAMKSYNPSFTWQSIMASK 663
            R++ AFN+A+LAKQGWR++   +SL+A+ LKA+Y+P+D FL A    + S+TW+SI+ ++
Sbjct: 460  RELRAFNEALLAKQGWRIICQPSSLMAQVLKAKYFPNDQFLQAKPKQHMSYTWRSILQAR 519

Query: 662  EVLLQGLRWRIGDGEKTRVWLDPWLQECRNFRPSRNNQDWPMDLKVSELMLPGRREWNSE 483
             ++ +G  W IG GE+  +W D W+ +  N     +  +     KV ++M      WN  
Sbjct: 520  WIIKKGCYWNIGTGEEVDIWKDNWIHQKGNSSTWSSKPNLTTHHKVKDIMNIHNNSWNET 579

Query: 482  AIHEIFSETEAKQILSIPLRNSGGIDRLVWHYSTNGFYSVKSGYQIALSIDRATDNAPSH 303
             I+++F   EA++IL IP+  +   D L+W  + +G Y+VKSGYQ       +T  + S 
Sbjct: 580  IINQLFLPIEAQKILQIPITGTSQPDALIWAGTIDGHYTVKSGYQAITEWSESTQASTSA 639

Query: 302  SGPISKIWRWIWQLNVPPKVQVFLWKATNGILPVGQNLIKKRVDVNPYCIRCHDHMETAE 123
            +     IW  +W+LN+PPK    LW+A N  +PV  NL KK V  +P C RC +H+ET  
Sbjct: 640  NN--DDIWPMLWKLNIPPKHSHLLWRALNEAIPVKGNLFKKGVKCDPLCPRCFNHVETIH 697

Query: 122  HALRDCAWSNFYWRASLLRLD 60
            HA  DC W+   W +S L ++
Sbjct: 698  HAFLDCVWAKQMWFSSNLTIN 718


>gb|PNX92808.1| ribonuclease H [Trifolium pratense]
          Length = 930

 Score =  397 bits (1019), Expect = e-126
 Identities = 199/447 (44%), Positives = 280/447 (62%), Gaps = 7/447 (1%)
 Frame = -1

Query: 1382 ISHLFFADDSIIFGRANMKEIEVIKNIISTYGEASGQMVNFEKSELNFSRGIPHTLAQSL 1203
            +SHL FADDS++F +A ++E  VIKNII  Y EASGQ+VN EKSE+ +SR +PH + +++
Sbjct: 236  VSHLLFADDSLLFCKATVQEATVIKNIILEYQEASGQLVNMEKSEIVYSRHVPHQIKENI 295

Query: 1202 ANQLGVQLVDKHAIYLGIPATVGRSKKSLFQGIIDRVNKKLKDWKAKTLSTAGKIVLIKS 1023
             + L ++ V+  + YLG+P  VGRSK+ +F  I D V KK+K WKA+ LS AG+  LIK+
Sbjct: 296  GHILPMKRVNHFSKYLGMPTHVGRSKRQVFDYIQDCVWKKIKGWKAQHLSFAGRSTLIKA 355

Query: 1022 VAQAIPTYLMSCFLIPKGVCQKINSLIARFWWGQRRDERRIHWISWRKLCTGKKEGGLGF 843
            VAQAIPTY+MSCFL+PK +C  I S+I +FWWG   D+R+IHWI W  +C  KK+GGL F
Sbjct: 356  VAQAIPTYVMSCFLLPKELCSHIESMICKFWWGSNNDKRKIHWIKWSTICKHKKKGGLSF 415

Query: 842  RDIEAFNKAMLAKQGWRLLNDDNSLLARTLKARYYPHDTFLNA-MKSYNPSFTWQSIMAS 666
            R++ AFN+A+LAKQGWR +   NS++A+ LKA+YYP  T L A + S N S+TW+SI  +
Sbjct: 416  RELRAFNEALLAKQGWRCITQPNSMVAQVLKAKYYPKTTLLEADIGSKNVSYTWRSISKA 475

Query: 665  KEVLLQGLRWRIGDGEKTRVWLDPWLQECRNFR----PSRNNQDWPMDLKVSELMLPGRR 498
              +L +G  W IG+G  T +W D WL   +  +         Q W     V +LM+P  R
Sbjct: 476  SWILKKGGLWNIGNGATTNIWTDNWLPRQQGHKIWSPKGEATQTW-----VKDLMIPEIR 530

Query: 497  EWNSEAIHEIFSETEAKQILSIPLRNSGGIDRLVWHYSTNGFYSVKSGYQIALSIDRATD 318
             WN + I + F + EA+QI  IP+ +    D   W Y+ +G Y+VKSGYQ A+   +   
Sbjct: 531  SWNRQLIFDTFMQFEAEQITQIPIVHLSRPDEFSWPYTKDGIYTVKSGYQ-AIQDWKEDP 589

Query: 317  NAP--SHSGPISKIWRWIWQLNVPPKVQVFLWKATNGILPVGQNLIKKRVDVNPYCIRCH 144
            N P  S+    + +W+ +W L +PPK    +W+     LPV  NL K+ V+  P C RC 
Sbjct: 590  NKPSTSYKPKNNSVWQKLWHLKIPPKYTHLIWRILQDALPVQSNLRKRGVNCYPLCPRCK 649

Query: 143  DHMETAEHALRDCAWSNFYWRASLLRL 63
            +++E   H    C W+   W AS L L
Sbjct: 650  ENIEDLNHVFSGCWWAKQVWFASPLTL 676


>gb|PNY15111.1| ribonuclease H [Trifolium pratense]
          Length = 1334

 Score =  405 bits (1041), Expect = e-125
 Identities = 193/438 (44%), Positives = 278/438 (63%)
 Frame = -1

Query: 1382 ISHLFFADDSIIFGRANMKEIEVIKNIISTYGEASGQMVNFEKSELNFSRGIPHTLAQSL 1203
            ISHLFFADDS++F RA+  E  VI N+++ Y +ASGQ+VN +KSE++FS+ + +     +
Sbjct: 651  ISHLFFADDSLLFARASAAEAGVILNVLAEYQKASGQVVNLDKSEVSFSQNVRNEDKDMI 710

Query: 1202 ANQLGVQLVDKHAIYLGIPATVGRSKKSLFQGIIDRVNKKLKDWKAKTLSTAGKIVLIKS 1023
             N++GV+ VD H+ YLG+P   GRSKK +F  +IDRV KKLK WK K LS AGK +LIK+
Sbjct: 711  RNRMGVKTVDTHSKYLGLPVVFGRSKKIIFSFVIDRVWKKLKGWKEKCLSRAGKEILIKA 770

Query: 1022 VAQAIPTYLMSCFLIPKGVCQKINSLIARFWWGQRRDERRIHWISWRKLCTGKKEGGLGF 843
            VAQAIP Y+M C+ +P   CQ+I +++A+FWWG +  ER+IHW+SW +L   KK+GG+GF
Sbjct: 771  VAQAIPNYIMGCYKLPNSCCQEIETMLAKFWWGSKGGERKIHWMSWERLSKTKKDGGMGF 830

Query: 842  RDIEAFNKAMLAKQGWRLLNDDNSLLARTLKARYYPHDTFLNAMKSYNPSFTWQSIMASK 663
            R I  FNKA+L K  WRL+  + SL+ R  K+RY+P  +FL A   Y PS+ W+SI ++ 
Sbjct: 831  RGINNFNKALLGKHCWRLMTGEESLMGRIFKSRYFPRTSFLEAKIGYQPSYAWRSIQSAT 890

Query: 662  EVLLQGLRWRIGDGEKTRVWLDPWLQECRNFRPSRNNQDWPMDLKVSELMLPGRREWNSE 483
            +V+  G RWRIG+GE  ++  D WL     F+     ++      VS L+ P  ++WN +
Sbjct: 891  DVMKLGTRWRIGNGESVKIREDRWLPNQVGFKVWSRGEELENGALVSALIDPDTKQWNRQ 950

Query: 482  AIHEIFSETEAKQILSIPLRNSGGIDRLVWHYSTNGFYSVKSGYQIALSIDRATDNAPSH 303
             + + F   EAKQILSIP+      D+++WHY  +G YSV+S + + L    + D A S 
Sbjct: 951  LVVQTFYPDEAKQILSIPISQRLPADKIIWHYERDGEYSVRSAHHL-LKQHNSRDVAASS 1009

Query: 302  SGPISKIWRWIWQLNVPPKVQVFLWKATNGILPVGQNLIKKRVDVNPYCIRCHDHMETAE 123
               ++ +WR IW+  VP +V+ FLW+    ILP   NL++K V +   C +CH   ET +
Sbjct: 1010 GQQMNNLWREIWKAPVPNRVRNFLWRLGKNILPTRANLVRKGVQIENLCPQCHSAPETID 1069

Query: 122  HALRDCAWSNFYWRASLL 69
            H    C  +   W AS L
Sbjct: 1070 HLFLHCHLTQLTWFASQL 1087


>ref|XP_024195790.1| uncharacterized protein LOC112198938 [Rosa chinensis]
          Length = 1175

 Score =  400 bits (1029), Expect = e-125
 Identities = 194/442 (43%), Positives = 283/442 (64%), Gaps = 2/442 (0%)
 Frame = -1

Query: 1382 ISHLFFADDSIIFGRANMKEIEVIKNIISTYGEASGQMVNFEKSELNFSRGIPHTLAQSL 1203
            ISHLFFADDS IF +A   +I  +++I   Y + SGQ +N+EKS ++FS+ +P      L
Sbjct: 517  ISHLFFADDSFIFSKAETTDILCMRDIFQKYEQMSGQQINYEKSCISFSKNVPRWKQDDL 576

Query: 1202 ANQLGVQLVDKHAIYLGIPATVGRSKKSLFQGIIDRVNKKLKDWKAKTLSTAGKIVLIKS 1023
            A  LGV+ VDKH  YLG+P  +  SK   F+ ++DRV  + + W+ KTLSTAGK VLIK+
Sbjct: 577  ACVLGVKRVDKHDKYLGLPTELSYSKDEAFRYLVDRVRTRTQGWRNKTLSTAGKEVLIKA 636

Query: 1022 VAQAIPTYLMSCFLIPKGVCQKINSLIARFWWGQRRDERRIHWISWRKLCTGKKEGGLGF 843
            V Q+IPTY+MSCF +PK +C +++ L+ARFWWG+   ER+IHW++W KLC  KKEGGLGF
Sbjct: 637  VVQSIPTYVMSCFELPKHLCDEMHRLMARFWWGEFGAERKIHWVAWDKLCAPKKEGGLGF 696

Query: 842  RDIEAFNKAMLAKQGWRLLNDDNSLLARTLKARYYPHDTFLNAMKSYNPSFTWQSIMASK 663
            RD+  FN A+LAKQGWRL+   +SLLA+  KARY+P+  F++A+     SF+W+SIM  +
Sbjct: 697  RDMHLFNTALLAKQGWRLICRPDSLLAQVFKARYFPNTDFMHAVLHKGASFSWRSIMKGR 756

Query: 662  EVLLQGLRWRIGDGEKTRVWLDPWLQECRNFRPSRNNQDWPMDLKVSELMLPGRREWNSE 483
            ++L +GLR+++G+GE   +W DPW+     F+P         DL+V +L+     +W   
Sbjct: 757  DLLKKGLRFQVGNGEDISIWNDPWVPLPYRFKPFSIPMQGAEDLRVVDLIDEETGDWQEW 816

Query: 482  AIHEIFSETEAKQILSIPLRNSGGIDRLVWHYSTNGFYSVKSGYQIALSID--RATDNAP 309
             +HE+F+  E   I+ IPL  SGGIDRLV H+   G YSVK+GY +A  +D    T +  
Sbjct: 817  LLHELFTPMEVVNIMKIPLSLSGGIDRLVCHFDKKGRYSVKNGYHVARVMDTLERTTSGS 876

Query: 308  SHSGPISKIWRWIWQLNVPPKVQVFLWKATNGILPVGQNLIKKRVDVNPYCIRCHDHMET 129
            S     +++W  +W++NVPPKV++  W+   G+LP    L K+    +  C+ C + +E 
Sbjct: 877  SFGADRARLWGKLWKVNVPPKVRMHAWRLVKGMLPTRATLAKRVQLSDVRCVYCSNGVED 936

Query: 128  AEHALRDCAWSNFYWRASLLRL 63
            + H  ++C     +W  S L L
Sbjct: 937  SLHLFKNCDALRTFWMHSSLEL 958


>gb|PNY14301.1| ribonuclease H [Trifolium pratense]
          Length = 1196

 Score =  396 bits (1018), Expect = e-123
 Identities = 187/426 (43%), Positives = 270/426 (63%)
 Frame = -1

Query: 1382 ISHLFFADDSIIFGRANMKEIEVIKNIISTYGEASGQMVNFEKSELNFSRGIPHTLAQSL 1203
            +SHLFFADDS++F RAN  E   I  I+ TY  ASGQ+VN +KSE +FSR +P     S+
Sbjct: 510  LSHLFFADDSLLFSRANSDEAHTIMKILKTYQNASGQVVNLDKSEASFSRNVPSIDKNSI 569

Query: 1202 ANQLGVQLVDKHAIYLGIPATVGRSKKSLFQGIIDRVNKKLKDWKAKTLSTAGKIVLIKS 1023
             N +GV+ V+  + YLG P   GRSKK +F  ++DR+ KK+K WK + LS AGK  LIK+
Sbjct: 570  CNMMGVKAVEAQSRYLGFPIPFGRSKKVIFSFVMDRIWKKVKGWKERCLSRAGKETLIKA 629

Query: 1022 VAQAIPTYLMSCFLIPKGVCQKINSLIARFWWGQRRDERRIHWISWRKLCTGKKEGGLGF 843
            VAQAIP Y++SC+ +P G C+ I++++A+FWWG   D+R+IHW+SW++L   K  GG+GF
Sbjct: 630  VAQAIPNYILSCYKMPLGCCKDIDAMLAKFWWGSNDDKRKIHWMSWKRLSKPKNTGGMGF 689

Query: 842  RDIEAFNKAMLAKQGWRLLNDDNSLLARTLKARYYPHDTFLNAMKSYNPSFTWQSIMASK 663
            R +E FNKA+L K  WRL+  + SLL + L++RYYP   F+ A + Y PSF W+SI++++
Sbjct: 690  RGMEDFNKALLGKHCWRLVGGECSLLEKVLRSRYYPKGDFMTASEGYQPSFAWRSIISAR 749

Query: 662  EVLLQGLRWRIGDGEKTRVWLDPWLQECRNFRPSRNNQDWPMDLKVSELMLPGRREWNSE 483
            EV+  G RW +G+G+  R+W D W+ +    R    + D   D KVS L+    R+WN  
Sbjct: 750  EVINLGERWCVGNGQNVRIWKDRWMVDRNLLRSRTPSCDLDEDSKVSALIDHDTRQWNRT 809

Query: 482  AIHEIFSETEAKQILSIPLRNSGGIDRLVWHYSTNGFYSVKSGYQIALSIDRATDNAPSH 303
             +   F E EAK+I+SIPL     +D  +WH+  NG YSV+S Y +     R  +  PS 
Sbjct: 810  LVFNCFDEAEAKKIVSIPLSCRLPLDNRIWHWEKNGAYSVRSAYHLLCDEKRKLEPGPSI 869

Query: 302  SGPISKIWRWIWQLNVPPKVQVFLWKATNGILPVGQNLIKKRVDVNPYCIRCHDHMETAE 123
                 KIW+ IW+  +P K++ FLW+    ILP  +NL KK ++++  C  CH  +E++ 
Sbjct: 870  VRE-EKIWKEIWKAPLPNKIKNFLWRLVKDILPTRENLAKKGINLDLSCPLCHHVLESSN 928

Query: 122  HALRDC 105
            H    C
Sbjct: 929  HLFMHC 934


>gb|PNX71213.1| ribonuclease H [Trifolium pratense]
          Length = 951

 Score =  390 bits (1003), Expect = e-123
 Identities = 185/447 (41%), Positives = 272/447 (60%), Gaps = 1/447 (0%)
 Frame = -1

Query: 1382 ISHLFFADDSIIFGRANMKEIEVIKNIISTYGEASGQMVNFEKSELNFSRGIPHTLAQSL 1203
            I+HL FADDS+ F RA  +E   ++NII  Y  ASGQ+VN +KSE+ FS+ +P+ +   +
Sbjct: 256  ITHLLFADDSLFFCRATKQEATNVRNIILDYQRASGQLVNMQKSEIIFSKMVPNEVKVEV 315

Query: 1202 ANQLGVQLVDKHAIYLGIPATVGRSKKSLFQGIIDRVNKKLKDWKAKTLSTAGKIVLIKS 1023
             + L +  VD  + YLG+P  +GRSK+ +F  I DRV KKLK WK K LS AG+  L+K+
Sbjct: 316  NHILPMTRVDHFSKYLGMPTDIGRSKQQIFNYIKDRVWKKLKGWKEKNLSYAGRGTLLKA 375

Query: 1022 VAQAIPTYLMSCFLIPKGVCQKINSLIARFWWGQRRDERRIHWISWRKLCTGKKEGGLGF 843
            V QAIPTY+MSCFL+PKG+C++I S+ + FWWG   D++++HWI+W+K+C  K +GG GF
Sbjct: 376  VIQAIPTYIMSCFLLPKGLCKQIESMTSNFWWGSNTDKKKLHWINWKKMCKNKTQGGYGF 435

Query: 842  RDIEAFNKAMLAKQGWRLLNDDNSLLARTLKARYYPHDTFLNAMKSYNPSFTWQSIMASK 663
            R+   FN+A+LAKQGWR+    +SL+A+  KA+Y+P   F+ A      S+TW+SI+ ++
Sbjct: 436  RNTCMFNEALLAKQGWRIATQPDSLVAKVYKAKYFPKCQFMEAKNGNMLSYTWRSILHAR 495

Query: 662  EVLLQGLRWRIGDGEKTRVWLDPWLQECRNFRPSRNNQDWPMDLKVSELMLPGRREWNSE 483
             +L +G  W IG+GE   +W D WL +   F+     Q +     V +L+ P   +WN  
Sbjct: 496  WILQKGCFWTIGNGESVNIWKDSWLPKQNGFKVWSTQQGYTRYNLVKDLINPATNQWNQN 555

Query: 482  AIHEIFSETEAKQILSIPLRNSGGIDRLVWHYSTNGFYSVKSGYQIALSIDRATDNAPSH 303
             IH+IF   EA QIL +PL      D LVW  + +G Y+VKSGY  A+  +    N  S 
Sbjct: 556  LIHQIFLPFEANQILQLPLVEPNSKDELVWSGTKDGLYTVKSGYHAAMEWNHLRHNQVSS 615

Query: 302  SGPISKI-WRWIWQLNVPPKVQVFLWKATNGILPVGQNLIKKRVDVNPYCIRCHDHMETA 126
            +   + + W+ +W+L +PPK    +W+  N  LPV  +L  K +  NP C RC+  +ET 
Sbjct: 616  NAIATDLTWQNLWKLKIPPKHATLIWRILNHSLPVRSSLSSKGIQCNPTCPRCNTSLETI 675

Query: 125  EHALRDCAWSNFYWRASLLRLDSQLVD 45
            +H    C W+   W  S + +     D
Sbjct: 676  DHVFMQCEWAKVVWFGSPMTIHFNTTD 702


>gb|PNY16580.1| ribonuclease H, partial [Trifolium pratense]
          Length = 894

 Score =  387 bits (995), Expect = e-122
 Identities = 191/440 (43%), Positives = 271/440 (61%)
 Frame = -1

Query: 1382 ISHLFFADDSIIFGRANMKEIEVIKNIISTYGEASGQMVNFEKSELNFSRGIPHTLAQSL 1203
            I+HL FADDS++F RAN KE EVI NI+ TY  ASGQ+V+ EKSE++FSR +P      +
Sbjct: 272  ITHLLFADDSLLFARANQKEAEVIINILQTYQTASGQLVSLEKSEVSFSRNLPTIEKNMI 331

Query: 1202 ANQLGVQLVDKHAIYLGIPATVGRSKKSLFQGIIDRVNKKLKDWKAKTLSTAGKIVLIKS 1023
             N++ V+ V  H+ YLG+P   GRSKK +F  + +R+ KK+K WK K LS AGK  LIKS
Sbjct: 332  CNKIDVKAVTNHSKYLGLPVIFGRSKKEIFASVQERIWKKIKGWKEKCLSRAGKETLIKS 391

Query: 1022 VAQAIPTYLMSCFLIPKGVCQKINSLIARFWWGQRRDERRIHWISWRKLCTGKKEGGLGF 843
            VAQAIP Y+MSC+ +P G C  I +++A+FWWG    +R+IHW+SW KL   K +GGLGF
Sbjct: 392  VAQAIPNYIMSCYKLPTGCCDNIEAMLAKFWWGTTEKQRKIHWVSWNKLGKAKSKGGLGF 451

Query: 842  RDIEAFNKAMLAKQGWRLLNDDNSLLARTLKARYYPHDTFLNAMKSYNPSFTWQSIMASK 663
            R  E FNKA+L KQ WRLL + +SLLA+  K+RY+P   F++A   Y PS+ W+S+  S+
Sbjct: 452  RSFEDFNKALLGKQCWRLLQNPDSLLAKVFKSRYFPRSKFMDANVGYQPSYAWRSLCNSR 511

Query: 662  EVLLQGLRWRIGDGEKTRVWLDPWLQECRNFRPSRNNQDWPMDLKVSELMLPGRREWNSE 483
            EV+  G RW IG+G+   +W D WL     F+      +   +  VS+L+    + W+  
Sbjct: 512  EVIDVGARWLIGNGKDVHIWNDKWLPAQDKFKVWSPVSNLAPNAMVSDLINLETKMWDKN 571

Query: 482  AIHEIFSETEAKQILSIPLRNSGGIDRLVWHYSTNGFYSVKSGYQIALSIDRATDNAPSH 303
             +   F+  EA+QIL+IPL      D+L+WH+  NG +SV+S Y + LS  R  ++  + 
Sbjct: 572  LVQNCFNSFEAEQILNIPLSWRLPADKLIWHWEKNGEFSVRSAYHM-LSEIRNQNSPEAS 630

Query: 302  SGPISKIWRWIWQLNVPPKVQVFLWKATNGILPVGQNLIKKRVDVNPYCIRCHDHMETAE 123
            S     +W+ IW++ VP  ++ FLW+    ILP    L KK + ++  C  C + +E  E
Sbjct: 631  SSRDHLLWKAIWKVKVPNCIKNFLWRLAKAILPTRSRLEKKGITLDTTCPLCFNDIECNE 690

Query: 122  HALRDCAWSNFYWRASLLRL 63
            H    C  S   W +S L L
Sbjct: 691  HLFMHCPLSKQVWFSSPLGL 710


>ref|XP_023920731.1| uncharacterized protein LOC112032201 [Quercus suber]
          Length = 1371

 Score =  396 bits (1018), Expect = e-122
 Identities = 191/460 (41%), Positives = 285/460 (61%), Gaps = 1/460 (0%)
 Frame = -1

Query: 1382 ISHLFFADDSIIFGRANMKEIEVIKNIISTYGEASGQMVNFEKSELNFSRGIPHTLAQSL 1203
            ISHLFFADDSIIF +A  ++   ++N+++ Y +ASGQ++N EK+ L FSR  P  + + +
Sbjct: 683  ISHLFFADDSIIFCQATPEQCSHLENLLTIYEQASGQLLNKEKTALFFSRNTPQDMQEEI 742

Query: 1202 ANQLGVQLVDKHAIYLGIPATVGRSKKSLFQGIIDRVNKKLKDWKAKTLSTAGKIVLIKS 1023
             N+ G +++ +H  YLG+P+ VGRSK++ F+ + ++++ KL  WK K LS AGK VLIK+
Sbjct: 743  KNRFGAEVIHQHETYLGLPSLVGRSKQNTFRALKEKLDNKLSGWKEKLLSQAGKEVLIKA 802

Query: 1022 VAQAIPTYLMSCFLIPKGVCQKINSLIARFWWGQRRDERRIHWISWRKLCTGKKEGGLGF 843
            VAQAIPTY MS F +P  +C  +  +I RFWWGQ+  + ++ W+SW K+C  K++GGLGF
Sbjct: 803  VAQAIPTYTMSVFKLPDSLCDDMTGMIRRFWWGQKDGQNKMAWLSWEKMCAPKEKGGLGF 862

Query: 842  RDIEAFNKAMLAKQGWRLLNDDNSLLARTLKARYYPHDTFLNAMKSYNPSFTWQSIMASK 663
            RD++AFN A+L KQGWRL N+ +SL+ R LKARY+P+  FL+A     PS+ W+SI++++
Sbjct: 863  RDLKAFNLALLTKQGWRLQNNPHSLVHRVLKARYFPNTDFLHAELGTKPSYAWRSILSAQ 922

Query: 662  EVLLQGLRWRIGDGEKTRVWLDPWLQECRNFRPSRNNQDWPMDLKVSELMLPGRREWNSE 483
             VL  G RW++GDGE   +W D WL     FR        P D KVS L+ P   EWN  
Sbjct: 923  PVLEAGYRWQVGDGENIGIWKDRWLPRPSTFRVLSPPTSLPDDTKVSSLIEPNSGEWNES 982

Query: 482  AIHEIFSETEAKQILSIPLRNSGGIDRLVWHYSTNGFYSVKSGYQIALSIDRATDNAPSH 303
             I +IFS  +   IL IPL      DR++W Y+  G ++V S Y++A+S+ +   +A + 
Sbjct: 983  LISQIFSPEDTACILGIPLSVHKPRDRIIWAYTPKGKFTVNSAYKVAMSMTQGNLDAEAS 1042

Query: 302  SGPIS-KIWRWIWQLNVPPKVQVFLWKATNGILPVGQNLIKKRVDVNPYCIRCHDHMETA 126
             G +  + WR +W L +P K+++F W+A   ILP   NL  + V  N  C  C+   ET 
Sbjct: 1043 HGELQIRFWRQVWNLRIPNKIKLFTWRACKNILPTKANLYHRHVLDNSTCEACNLDPETT 1102

Query: 125  EHALRDCAWSNFYWRASLLRLDSQLVDTKSASITDFIFEI 6
             H   DC  +   W ++ L  D      +     DF++++
Sbjct: 1103 GHLFWDCHLAKEVWTSADLPFDR--TGIRYRDFMDFLWDL 1140


>ref|XP_024037590.1| uncharacterized protein LOC112097210 [Citrus clementina]
          Length = 1154

 Score =  392 bits (1006), Expect = e-122
 Identities = 190/438 (43%), Positives = 280/438 (63%)
 Frame = -1

Query: 1382 ISHLFFADDSIIFGRANMKEIEVIKNIISTYGEASGQMVNFEKSELNFSRGIPHTLAQSL 1203
            +SHL FADDS+IF RA +++ + +K +   YG+ASGQ+ NFEKS + FS+G  +    ++
Sbjct: 475  VSHLLFADDSLIFTRAAVEDCKHLKALFECYGKASGQIFNFEKSSMFFSKGTRNDQITAI 534

Query: 1202 ANQLGVQLVDKHAIYLGIPATVGRSKKSLFQGIIDRVNKKLKDWKAKTLSTAGKIVLIKS 1023
            +    +++V +H  YLG+P+ +GR  KS F  +  RV  K+  W+ K  ++ GK VLIK+
Sbjct: 535  SEIFQLKVVSRHEKYLGLPSMIGRKTKSFFNEVKLRVLNKISSWQHKFFTSGGKEVLIKA 594

Query: 1022 VAQAIPTYLMSCFLIPKGVCQKINSLIARFWWGQRRDERRIHWISWRKLCTGKKEGGLGF 843
            VAQAIPTY MS F IP G+C+ I   +ARFWWG ++D + IHW  W ++   K  GG+GF
Sbjct: 595  VAQAIPTYAMSVFKIPLGLCEDIQKAMARFWWGTKQDRKGIHWARWERISHSKARGGMGF 654

Query: 842  RDIEAFNKAMLAKQGWRLLNDDNSLLARTLKARYYPHDTFLNAMKSYNPSFTWQSIMASK 663
            RD+ +FN+A++AKQGWR++   +SL+AR LKARY+ H  F+NA     PSF W+SI+  +
Sbjct: 655  RDLSSFNQALVAKQGWRIMQFPSSLVARVLKARYFKHTGFMNAGLGSKPSFVWRSIVWGR 714

Query: 662  EVLLQGLRWRIGDGEKTRVWLDPWLQECRNFRPSRNNQDWPMDLKVSELMLPGRREWNSE 483
            +VL +G RWRIG+G+   V+ + W+     F+P  +      D  V+EL +  +++W  +
Sbjct: 715  QVLHKGARWRIGNGQNVLVYGNNWIPRPTTFKPI-SAPSMGTDTTVAEL-IDEKQQWRED 772

Query: 482  AIHEIFSETEAKQILSIPLRNSGGIDRLVWHYSTNGFYSVKSGYQIALSIDRATDNAPSH 303
             I + F   +A+ I+ IPL      D+L+WHY   G+YSVKSGYQ+A+ I    D  PS 
Sbjct: 773  LILQHFRPEDAEAIMQIPLPKRPKEDQLIWHYDKKGYYSVKSGYQVAMRIKFPED--PSC 830

Query: 302  SGPISKIWRWIWQLNVPPKVQVFLWKATNGILPVGQNLIKKRVDVNPYCIRCHDHMETAE 123
            S     +WR+IW+L +P KV++FLW+A + +LP  +NL KK+V   P C  CH H+ET  
Sbjct: 831  SNHDQNLWRFIWKLAIPEKVKIFLWRAAHDLLPTAENLWKKKVLQEPMCQSCHCHVETVS 890

Query: 122  HALRDCAWSNFYWRASLL 69
            HAL +C  +   WR S L
Sbjct: 891  HALVECNRARKIWRYSNL 908


>ref|XP_021760550.1| uncharacterized protein LOC110725370 [Chenopodium quinoa]
          Length = 1005

 Score =  388 bits (996), Expect = e-121
 Identities = 190/433 (43%), Positives = 272/433 (62%)
 Frame = -1

Query: 1382 ISHLFFADDSIIFGRANMKEIEVIKNIISTYGEASGQMVNFEKSELNFSRGIPHTLAQSL 1203
            ISHL FADD+IIF RAN+ E+E IKN++  Y EASGQMVN  K+ ++FS+G+P     +L
Sbjct: 487  ISHLLFADDNIIFSRANVDEVEKIKNVLKVYEEASGQMVNLGKTTVSFSKGVPEDRKGAL 546

Query: 1202 ANQLGVQLVDKHAIYLGIPATVGRSKKSLFQGIIDRVNKKLKDWKAKTLSTAGKIVLIKS 1023
            A+ LGV +VD H  YLG+P  +GRSK+ L +GI +++ K+L+ WK   LS AG+ VLIK+
Sbjct: 547  ADALGVNVVDIHDKYLGLPTVIGRSKRVLTKGIREKLCKRLQGWKGGILSKAGREVLIKA 606

Query: 1022 VAQAIPTYLMSCFLIPKGVCQKINSLIARFWWGQRRDERRIHWISWRKLCTGKKEGGLGF 843
            VAQ+IPTY MS F  P   C ++ SL+A FWWGQR  ER+IHWI+W++LC  K  GGLGF
Sbjct: 607  VAQSIPTYAMSVFKFPSSFCDELRSLVANFWWGQRNGERKIHWIAWKRLCEPKAAGGLGF 666

Query: 842  RDIEAFNKAMLAKQGWRLLNDDNSLLARTLKARYYPHDTFLNAMKSYNPSFTWQSIMASK 663
            RD + FN+A+L KQ WRL+   +SL+A+ LKA+YYP+  F+++     PS++W+ I  SK
Sbjct: 667  RDFKLFNEALLGKQAWRLIQFPDSLVAKVLKAKYYPNGDFMSSELGATPSYSWRGIWGSK 726

Query: 662  EVLLQGLRWRIGDGEKTRVWLDPWLQECRNFRPSRNNQDWPMDLKVSELMLPGRREWNSE 483
             V+ +G RWR+GDG    VW  PW+    + +      +   D++V +L+     +WN  
Sbjct: 727  WVINRGARWRVGDGLDILVWKSPWIPGTSSRKVVSPRGEASEDMRVCDLLQLAAAQWNVP 786

Query: 482  AIHEIFSETEAKQILSIPLRNSGGIDRLVWHYSTNGFYSVKSGYQIALSIDRATDNAPSH 303
             I ++F   E  +ILSIP+      DR+ W    +G YSV+S Y+ A+  D   +   S 
Sbjct: 787  LIDKLFLPFERDRILSIPVSFRLPRDRMCWDLERDGVYSVRSAYR-AIFGDVGVEGVASS 845

Query: 302  SGPISKIWRWIWQLNVPPKVQVFLWKATNGILPVGQNLIKKRVDVNPYCIRCHDHMETAE 123
            S P S IW+ +W  +  P+V++F W+A  G LP  + L ++   ++P C  C    ET  
Sbjct: 846  SSPTS-IWKKVWHASTLPRVKIFFWRACLGALPTAKGLHRRVPRISPLCSICGVEEETEM 904

Query: 122  HALRDCAWSNFYW 84
            H LRDC  +   W
Sbjct: 905  HCLRDCFIARSIW 917


>gb|PRQ21155.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 761

 Score =  381 bits (978), Expect = e-121
 Identities = 187/429 (43%), Positives = 265/429 (61%)
 Frame = -1

Query: 1382 ISHLFFADDSIIFGRANMKEIEVIKNIISTYGEASGQMVNFEKSELNFSRGIPHTLAQSL 1203
            I HL FADDS++FG+A + E + I+++++ Y  ASGQ +NF KS + FS+ +P     SL
Sbjct: 85   IHHLLFADDSLVFGKATLSECQHIQSVLNAYELASGQQINFAKSSIVFSKRVPEADKLSL 144

Query: 1202 ANQLGVQLVDKHAIYLGIPATVGRSKKSLFQGIIDRVNKKLKDWKAKTLSTAGKIVLIKS 1023
            A+ LGV +  KH  YLG+P  +GR++   F  I +R++KKL  W+ K LS AGK +L++ 
Sbjct: 145  ASFLGVAIEVKHEKYLGLPTYLGRNRTETFAYIKERLSKKLAGWQGKLLSGAGKDLLVRV 204

Query: 1022 VAQAIPTYLMSCFLIPKGVCQKINSLIARFWWGQRRDERRIHWISWRKLCTGKKEGGLGF 843
            VAQA+P+Y MSCFL+P   C  ++ + ++FWWG + +ER+IHW+SW +LC  K+EGG+GF
Sbjct: 205  VAQALPSYAMSCFLLPNNFCDDLHQMCSKFWWGSKPNERKIHWMSWERLCRSKEEGGMGF 264

Query: 842  RDIEAFNKAMLAKQGWRLLNDDNSLLARTLKARYYPHDTFLNAMKSYNPSFTWQSIMASK 663
            RD+ A N A+LAKQGWRL+    SL++R  KARY+PH +FLNA    + S  W+ I  +K
Sbjct: 265  RDLHAHNLALLAKQGWRLIRYPGSLVSRLFKARYFPHSSFLNATTPTHSSSCWRGIFVAK 324

Query: 662  EVLLQGLRWRIGDGEKTRVWLDPWLQECRNFRPSRNNQDWPMDLKVSELMLPGRREWNSE 483
             VL  GLRW++G+G   R+W DPW+     FR  R     P+ L VS+LM+ G   WN E
Sbjct: 325  SVLQAGLRWQVGNGTSIRIWDDPWIPRPNLFRSIRYGPS-PLVL-VSDLMVDG--HWNKE 380

Query: 482  AIHEIFSETEAKQILSIPLRNSGGIDRLVWHYSTNGFYSVKSGYQIALSIDRATDNAPSH 303
             I E F   EA  I SIPL  S   DRL+WH+   G ++ K  Y+IA +       + S 
Sbjct: 381  LIFENFHADEALLICSIPLSRSIVPDRLIWHFDMKGLFTTKIAYKIAFASLHPVLTSGSS 440

Query: 302  SGPISKIWRWIWQLNVPPKVQVFLWKATNGILPVGQNLIKKRVDVNPYCIRCHDHMETAE 123
            S      W++IW   +P KV+V +WK    ILP    L  +RV V   C+ C+   ET  
Sbjct: 441  SNSNPSHWKFIWAAPIPGKVKVHVWKVCASILPTASQLRSRRVPVEDGCLFCNSEEETLS 500

Query: 122  HALRDCAWS 96
            H  R+C ++
Sbjct: 501  HVSRECCFT 509