BLASTX nr result

ID: Rehmannia32_contig00003959 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00003959
         (386 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011080458.1| NADP-dependent malic enzyme-like [Sesamum in...    73   2e-12
gb|PIN12256.1| Malate dehydrogenase (oxaloacetate-decarboxylatin...    68   1e-10

>ref|XP_011080458.1| NADP-dependent malic enzyme-like [Sesamum indicum]
          Length = 650

 Score = 72.8 bits (177), Expect = 2e-12
 Identities = 43/81 (53%), Positives = 45/81 (55%)
 Frame = +2

Query: 143 VSKSLTQSTQRKIXXXXXXXXXXXXNGKPGDRNVSVLMENTLKEMREXXXXXXXXXXIEQ 322
           VS++LTQSTQRKI            NGKPGDRNVSVLMENTLKEMRE           E 
Sbjct: 17  VSRNLTQSTQRKISAPPMVVASVTPNGKPGDRNVSVLMENTLKEMRENAPSSSSPSLTEN 76

Query: 323 ESKSTXXXXXXXXXXXXSATE 385
           ESKST            SATE
Sbjct: 77  ESKSTVGGGVEDVYGEDSATE 97


>gb|PIN12256.1| Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))
           [Handroanthus impetiginosus]
          Length = 469

 Score = 68.2 bits (165), Expect = 1e-10
 Identities = 43/82 (52%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
 Frame = +2

Query: 143 VSKSLTQSTQRKIXXXXXXXXXXXXNGKPGDRNVSVLMENTLKEMRE-XXXXXXXXXXIE 319
           VSK LTQSTQRKI            NGKPGDRNVSVLMENTLKEMRE           IE
Sbjct: 17  VSKGLTQSTQRKIPAPPLVVASVSSNGKPGDRNVSVLMENTLKEMRENAPSSSSSSSAIE 76

Query: 320 QESKSTXXXXXXXXXXXXSATE 385
           ++S+ST            SATE
Sbjct: 77  KKSESTVGGGVEDVYGEDSATE 98


Top