BLASTX nr result
ID: Rehmannia32_contig00003664
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00003664
(677 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011086272.1| sister chromatid cohesion protein PDS5 homol... 80 1e-13
ref|XP_011086271.1| sister chromatid cohesion protein PDS5 homol... 80 1e-13
ref|XP_012848784.1| PREDICTED: sister chromatid cohesion protein... 69 9e-10
ref|XP_012848783.1| PREDICTED: sister chromatid cohesion protein... 69 9e-10
ref|XP_020553970.1| sister chromatid cohesion protein PDS5 homol... 69 9e-10
ref|XP_011096143.1| sister chromatid cohesion protein PDS5 homol... 69 9e-10
ref|XP_022877905.1| sister chromatid cohesion protein PDS5 homol... 65 2e-08
gb|PIN12278.1| Sister chromatid cohesion complex Cohesin, subuni... 61 4e-07
>ref|XP_011086272.1| sister chromatid cohesion protein PDS5 homolog B isoform X2 [Sesamum
indicum]
Length = 1650
Score = 80.5 bits (197), Expect = 1e-13
Identities = 39/74 (52%), Positives = 54/74 (72%)
Frame = +2
Query: 5 HDSHKSHNKEVSSSDKMDGTEEVSGQEADEAEDMDNQPTTSEKPDKKTSVSDSADVEISD 184
HD+H S N+ +SSSDK +++ + ADEA+ + + T SEK DKKTS SDS++ E+SD
Sbjct: 1578 HDAHGSDNEAISSSDKKQ-PNKINEESADEADSLHSHATASEKIDKKTSASDSSETELSD 1636
Query: 185 DELLSTWKQRAGKK 226
+E LS WKQR+GKK
Sbjct: 1637 NEPLSMWKQRSGKK 1650
>ref|XP_011086271.1| sister chromatid cohesion protein PDS5 homolog B isoform X1 [Sesamum
indicum]
Length = 1651
Score = 80.5 bits (197), Expect = 1e-13
Identities = 39/74 (52%), Positives = 54/74 (72%)
Frame = +2
Query: 5 HDSHKSHNKEVSSSDKMDGTEEVSGQEADEAEDMDNQPTTSEKPDKKTSVSDSADVEISD 184
HD+H S N+ +SSSDK +++ + ADEA+ + + T SEK DKKTS SDS++ E+SD
Sbjct: 1579 HDAHGSDNEAISSSDKKQ-PNKINEESADEADSLHSHATASEKIDKKTSASDSSETELSD 1637
Query: 185 DELLSTWKQRAGKK 226
+E LS WKQR+GKK
Sbjct: 1638 NEPLSMWKQRSGKK 1651
>ref|XP_012848784.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog A-like
isoform X2 [Erythranthe guttata]
Length = 1650
Score = 68.9 bits (167), Expect = 9e-10
Identities = 43/78 (55%), Positives = 54/78 (69%), Gaps = 4/78 (5%)
Frame = +2
Query: 5 HDSHKSH-NKEVSSSDKMD--GTEEVSGQEADEAEDMDNQPTTSEKPDKKTSVSDSADVE 175
+D+H+S N+ VSS D+ + T+E S QE +EAEDMD ++KTSVSDS E
Sbjct: 1581 NDAHESSDNESVSSQDEEEVYETKEESEQEVEEAEDMDT--------NEKTSVSDSVQAE 1632
Query: 176 ISDD-ELLSTWKQRAGKK 226
+SDD ELLSTWKQRAGKK
Sbjct: 1633 LSDDDELLSTWKQRAGKK 1650
>ref|XP_012848783.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog A-like
isoform X1 [Erythranthe guttata]
Length = 1651
Score = 68.9 bits (167), Expect = 9e-10
Identities = 43/78 (55%), Positives = 54/78 (69%), Gaps = 4/78 (5%)
Frame = +2
Query: 5 HDSHKSH-NKEVSSSDKMD--GTEEVSGQEADEAEDMDNQPTTSEKPDKKTSVSDSADVE 175
+D+H+S N+ VSS D+ + T+E S QE +EAEDMD ++KTSVSDS E
Sbjct: 1582 NDAHESSDNESVSSQDEEEVYETKEESEQEVEEAEDMDT--------NEKTSVSDSVQAE 1633
Query: 176 ISDD-ELLSTWKQRAGKK 226
+SDD ELLSTWKQRAGKK
Sbjct: 1634 LSDDDELLSTWKQRAGKK 1651
>ref|XP_020553970.1| sister chromatid cohesion protein PDS5 homolog A isoform X2 [Sesamum
indicum]
Length = 1659
Score = 68.9 bits (167), Expect = 9e-10
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Frame = +2
Query: 20 SHNKEVSSSDK--MDGTEEVSGQEADEAEDMDN-QPTTSEKPDKKTSVSDSADVEISDDE 190
S N+ SSS + +D +E S +EADEA + + Q + P+KKT SDS D E+SDDE
Sbjct: 1588 SDNEAASSSGEKQLDEAKEESDREADEANNNGSCQQAALDNPEKKTPASDSLDAEVSDDE 1647
Query: 191 LLSTWKQRAGKK 226
LLSTWK+RAGKK
Sbjct: 1648 LLSTWKRRAGKK 1659
>ref|XP_011096143.1| sister chromatid cohesion protein PDS5 homolog A isoform X1 [Sesamum
indicum]
Length = 1660
Score = 68.9 bits (167), Expect = 9e-10
Identities = 38/72 (52%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Frame = +2
Query: 20 SHNKEVSSSDK--MDGTEEVSGQEADEAEDMDN-QPTTSEKPDKKTSVSDSADVEISDDE 190
S N+ SSS + +D +E S +EADEA + + Q + P+KKT SDS D E+SDDE
Sbjct: 1589 SDNEAASSSGEKQLDEAKEESDREADEANNNGSCQQAALDNPEKKTPASDSLDAEVSDDE 1648
Query: 191 LLSTWKQRAGKK 226
LLSTWK+RAGKK
Sbjct: 1649 LLSTWKRRAGKK 1660
>ref|XP_022877905.1| sister chromatid cohesion protein PDS5 homolog A-B-like isoform X1
[Olea europaea var. sylvestris]
ref|XP_022877906.1| sister chromatid cohesion protein PDS5 homolog A-B-like isoform X2
[Olea europaea var. sylvestris]
ref|XP_022877907.1| sister chromatid cohesion protein PDS5 homolog A-B-like isoform X3
[Olea europaea var. sylvestris]
Length = 1638
Score = 64.7 bits (156), Expect = 2e-08
Identities = 34/68 (50%), Positives = 43/68 (63%)
Frame = +2
Query: 20 SHNKEVSSSDKMDGTEEVSGQEADEAEDMDNQPTTSEKPDKKTSVSDSADVEISDDELLS 199
S N VSSSDK +E +E + MD+ PT+ +KP KK S S ++E+SDDE LS
Sbjct: 1576 SDNGGVSSSDKQQPQ-----RETEEVDSMDSLPTSLDKPKKKIPASSSMNLELSDDETLS 1630
Query: 200 TWKQRAGK 223
TWKQR GK
Sbjct: 1631 TWKQRVGK 1638
>gb|PIN12278.1| Sister chromatid cohesion complex Cohesin, subunit PDS5 [Handroanthus
impetiginosus]
Length = 1654
Score = 61.2 bits (147), Expect = 4e-07
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Frame = +2
Query: 5 HDSHKSHNKEVSSSDKM--DGTEEVSGQEADEAEDMDNQPTTSEKPDKKTSVSDSADVEI 178
H++H S ++ VSSSDK D +E S QE DE +DMD S P +K +V+ E+
Sbjct: 1588 HNAHGSDDEAVSSSDKKQPDEKKEESDQETDEVDDMD-----SHAPSEKKTVN----AEL 1638
Query: 179 SDDELLSTWKQRAGKK 226
SDDE LS WKQR GKK
Sbjct: 1639 SDDEPLSLWKQRTGKK 1654