BLASTX nr result

ID: Rehmannia31_contig00031158 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00031158
         (464 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP14440.1| unnamed protein product [Coffea canephora]             55   3e-06

>emb|CDP14440.1| unnamed protein product [Coffea canephora]
          Length = 228

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 30/109 (27%), Positives = 51/109 (46%)
 Frame = -3

Query: 339 AWSSSRDLATNLVDATLMAVREALIKAAQKNWQKVVVCVDDKSLVCDLRKMNAADVKCSI 160
           AWS     A N       AVR  +IKAA K W+ + + ++D+ L+  +R      ++ + 
Sbjct: 118 AWSLKERQAGNKAQDNAEAVRLCMIKAATKGWRDIKIRIEDRKLLDQIRAGKVRSLELAT 177

Query: 159 IVEDIFHLANRLEFCCFEAMDYLCKMSCNRLAIHAIEGEASQEWLHPIP 13
           I+EDI  + +    C F+ ++      C  L+  A+      EW + IP
Sbjct: 178 IIEDIQKMTSWFRMCFFDRLNEDIDSMCYSLSKIALLNFCDMEWNYSIP 226


Top