BLASTX nr result

ID: Rehmannia31_contig00030993 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00030993
         (622 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN24043.1| hypothetical protein CDL12_03229 [Handroanthus im...    83   7e-15
ref|XP_011077943.2| LOW QUALITY PROTEIN: E3 ubiquitin-protein li...    63   5e-08

>gb|PIN24043.1| hypothetical protein CDL12_03229 [Handroanthus impetiginosus]
          Length = 844

 Score = 83.2 bits (204), Expect = 7e-15
 Identities = 73/226 (32%), Positives = 100/226 (44%), Gaps = 23/226 (10%)
 Frame = -3

Query: 620  RKISSVGDVLERLEMKMARNTXXXXXXXXXXXXXXKRVEKVEKSXXXXXXXXXGFRLKKV 441
            RK S+VG++L+R  +K+AR+                 +EKVEK          GFR KK 
Sbjct: 344  RKSSTVGEILKRSGVKVARHRDGDGVLLKDLRPK--NMEKVEKLGDHDGQRIEGFRSKKA 401

Query: 440  EKLVNGD---------NKALKNGEVEIVXXXXXXXXXXXXXXAMTLSQMRVLAXXXXXKQ 288
              LV  D         N+ L    V+IV               MTLSQM++LA       
Sbjct: 402  GNLVYVDKSSRDIDAANELLSRNGVDIVESERTKRAKAREEETMTLSQMQMLAKKKKNL- 460

Query: 287  VQGKLVIEEKEVNGDKLK--------------AXXXXXXXXXXXXXXXXEMVQPMLKMYK 150
            V+GK  ++EKEVN + LK                               E V    K  +
Sbjct: 461  VEGKPTLKEKEVNAETLKLMENGGEKEESKNEEEEERGEDEKVEEDKENEKVNLREKNNR 520

Query: 149  RRVSKDKNVEIVNRISKSPMISEIERDKSPRKGNLEVIPVENDKEK 12
            RRVSKD+N E+   IS+SP+ SE ERD++   GN +V+PVE + E+
Sbjct: 521  RRVSKDRNSEVEKTISESPVRSETERDRALENGNAQVVPVEKENEQ 566


>ref|XP_011077943.2| LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase BRE1A [Sesamum
           indicum]
          Length = 858

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 31/55 (56%), Positives = 40/55 (72%)
 Frame = -3

Query: 179 MVQPMLKMYKRRVSKDKNVEIVNRISKSPMISEIERDKSPRKGNLEVIPVENDKE 15
           MV    K Y RRVSKD+N+E+V R SK+   SE+ERD+S  +GNLEV+PVE + E
Sbjct: 494 MVSLREKTYSRRVSKDRNLEVVKRTSKNLQNSEMERDRSSEEGNLEVLPVEKEME 548


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