BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00030734
         (495 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011085577.1| DNA-directed RNA polymerase 2, chloroplastic...   149   2e-38
gb|PIN06368.1| DNA-directed RNA polymerase [Handroanthus impetig...   116   3e-28
ref|XP_022884193.1| DNA-directed RNA polymerase 2B, chloroplasti...   100   1e-21
ref|XP_022884192.1| DNA-directed RNA polymerase 2B, chloroplasti...   100   1e-21
ref|XP_022844752.1| DNA-directed RNA polymerase 2B, chloroplasti...   100   3e-21
ref|XP_022844750.1| DNA-directed RNA polymerase 2B, chloroplasti...   100   3e-21
ref|XP_022844749.1| DNA-directed RNA polymerase 2B, chloroplasti...   100   3e-21
ref|XP_022844748.1| DNA-directed RNA polymerase 2B, chloroplasti...   100   3e-21
ref|XP_022844747.1| DNA-directed RNA polymerase 2B, chloroplasti...   100   3e-21
ref|XP_016445194.1| PREDICTED: DNA-directed RNA polymerase 2, ch...    87   1e-16
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer...    86   2e-16
ref|NP_001289520.1| DNA-directed RNA polymerase 2, chloroplastic...    86   2e-16
ref|XP_009619460.1| PREDICTED: DNA-directed RNA polymerase 2B, c...    83   2e-15
ref|NP_001311818.1| DNA-directed RNA polymerase 2B, chloroplasti...    83   2e-15
ref|XP_019234815.1| PREDICTED: DNA-directed RNA polymerase 2B, c...    81   1e-14
gb|PHT57010.1| DNA-directed RNA polymerase 2B, chloroplastic/mit...    78   8e-14
ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2, ch...    77   3e-13
emb|CDP02357.1| unnamed protein product [Coffea canephora]             77   4e-13
ref|XP_016561218.1| PREDICTED: DNA-directed RNA polymerase 2, ch...    75   2e-12
gb|PHT91663.1| DNA-directed RNA polymerase 2, chloroplastic/mito...    75   2e-12

>ref|XP_011085577.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial [Sesamum
           indicum]
          Length = 1032

 Score =  149 bits (376), Expect = 2e-38
 Identities = 74/108 (68%), Positives = 82/108 (75%)
 Frame = -3

Query: 325 MCSSKTPFSFSFEIDGLRTPFHKPVDILNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHSL 146
           M SSKTP SF F+ID  RTPFHKPV ILNP++   VMWRNI KQVSSRTP KL RNS SL
Sbjct: 1   MSSSKTPISFGFKIDNSRTPFHKPVLILNPYRDCRVMWRNIVKQVSSRTPLKLCRNSESL 60

Query: 145 SRTCSFLGFGQDSVYRDKCKSRSLFELHSSSNVCFPILGFQKIGDISA 2
           SRTCSFLG  Q+S + DK K R LFEL+S    CFP LGFQK+GD S+
Sbjct: 61  SRTCSFLGSAQESAFPDKFKFRPLFELNSRPTFCFPELGFQKLGDFSS 108


>gb|PIN06368.1| DNA-directed RNA polymerase [Handroanthus impetiginosus]
          Length = 353

 Score =  116 bits (291), Expect = 3e-28
 Identities = 63/107 (58%), Positives = 73/107 (68%)
 Frame = -3

Query: 325 MCSSKTPFSFSFEIDGLRTPFHKPVDILNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHSL 146
           M S+K P SFSF+ID  + PF +PV  LN  K STVMWRNI+KQ+S        R+S SL
Sbjct: 1   MFSAKIPISFSFKIDNSKAPFSRPVIYLNSRKDSTVMWRNISKQLS--------RSSKSL 52

Query: 145 SRTCSFLGFGQDSVYRDKCKSRSLFELHSSSNVCFPILGFQKIGDIS 5
           SRT S  GF  DSV+ DK K   LFEL+S SNVCFP  GFQKIGD+S
Sbjct: 53  SRTGSIRGFAYDSVFPDKFKWTPLFELNSRSNVCFPKFGFQKIGDLS 99


>ref|XP_022884193.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like
           isoform X2 [Olea europaea var. sylvestris]
          Length = 965

 Score =  100 bits (250), Expect = 1e-21
 Identities = 53/107 (49%), Positives = 70/107 (65%), Gaps = 1/107 (0%)
 Frame = -3

Query: 325 MCSSKTPFSFSFEIDGLRTPF-HKPVDILNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 149
           M S KTP S S +I+  + P  +    ++N  K+S VM R I KQ +S++P+KL  N  S
Sbjct: 1   MSSCKTPLSLSIKIEQPKIPLGNSAAFVVNLPKNSPVMLREIVKQATSKSPTKLSLNPQS 60

Query: 148 LSRTCSFLGFGQDSVYRDKCKSRSLFELHSSSNVCFPILGFQKIGDI 8
            SRTCSFLGF QDS + +K K R LFEL+SSSN CF  LG +K G++
Sbjct: 61  FSRTCSFLGFSQDSTFPEKFKCRPLFELNSSSNFCFSELGLRKFGEV 107


>ref|XP_022884192.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like
           isoform X1 [Olea europaea var. sylvestris]
          Length = 1036

 Score =  100 bits (250), Expect = 1e-21
 Identities = 53/107 (49%), Positives = 70/107 (65%), Gaps = 1/107 (0%)
 Frame = -3

Query: 325 MCSSKTPFSFSFEIDGLRTPF-HKPVDILNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 149
           M S KTP S S +I+  + P  +    ++N  K+S VM R I KQ +S++P+KL  N  S
Sbjct: 1   MSSCKTPLSLSIKIEQPKIPLGNSAAFVVNLPKNSPVMLREIVKQATSKSPTKLSLNPQS 60

Query: 148 LSRTCSFLGFGQDSVYRDKCKSRSLFELHSSSNVCFPILGFQKIGDI 8
            SRTCSFLGF QDS + +K K R LFEL+SSSN CF  LG +K G++
Sbjct: 61  FSRTCSFLGFSQDSTFPEKFKCRPLFELNSSSNFCFSELGLRKFGEV 107


>ref|XP_022844752.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like
           isoform X6 [Olea europaea var. sylvestris]
          Length = 993

 Score = 99.8 bits (247), Expect = 3e-21
 Identities = 54/107 (50%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
 Frame = -3

Query: 325 MCSSKTPFSFSFEIDGLRTPFHKP-VDILNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 149
           M SSK   S S +ID  + P  KP V +LN   +S+VM+R I KQ +S+T +KL  N  S
Sbjct: 1   MYSSKPELSLSIKIDQTKFPLGKPAVFVLNQPNNSSVMFRVIVKQATSKTAAKLSLNPRS 60

Query: 148 LSRTCSFLGFGQDSVYRDKCKSRSLFELHSSSNVCFPILGFQKIGDI 8
            SRTCSFLGF QDS + +K K R LF  +SSS++C P LG +KIG++
Sbjct: 61  FSRTCSFLGFSQDSTFPEKFKVRPLFYFNSSSSICNPELGLRKIGEV 107


>ref|XP_022844750.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like
           isoform X4 [Olea europaea var. sylvestris]
          Length = 1036

 Score = 99.8 bits (247), Expect = 3e-21
 Identities = 54/107 (50%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
 Frame = -3

Query: 325 MCSSKTPFSFSFEIDGLRTPFHKP-VDILNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 149
           M SSK   S S +ID  + P  KP V +LN   +S+VM+R I KQ +S+T +KL  N  S
Sbjct: 1   MYSSKPELSLSIKIDQTKFPLGKPAVFVLNQPNNSSVMFRVIVKQATSKTAAKLSLNPRS 60

Query: 148 LSRTCSFLGFGQDSVYRDKCKSRSLFELHSSSNVCFPILGFQKIGDI 8
            SRTCSFLGF QDS + +K K R LF  +SSS++C P LG +KIG++
Sbjct: 61  FSRTCSFLGFSQDSTFPEKFKVRPLFYFNSSSSICNPELGLRKIGEV 107


>ref|XP_022844749.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like
           isoform X3 [Olea europaea var. sylvestris]
          Length = 1047

 Score = 99.8 bits (247), Expect = 3e-21
 Identities = 54/107 (50%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
 Frame = -3

Query: 325 MCSSKTPFSFSFEIDGLRTPFHKP-VDILNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 149
           M SSK   S S +ID  + P  KP V +LN   +S+VM+R I KQ +S+T +KL  N  S
Sbjct: 1   MYSSKPELSLSIKIDQTKFPLGKPAVFVLNQPNNSSVMFRVIVKQATSKTAAKLSLNPRS 60

Query: 148 LSRTCSFLGFGQDSVYRDKCKSRSLFELHSSSNVCFPILGFQKIGDI 8
            SRTCSFLGF QDS + +K K R LF  +SSS++C P LG +KIG++
Sbjct: 61  FSRTCSFLGFSQDSTFPEKFKVRPLFYFNSSSSICNPELGLRKIGEV 107


>ref|XP_022844748.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like
           isoform X2 [Olea europaea var. sylvestris]
          Length = 1048

 Score = 99.8 bits (247), Expect = 3e-21
 Identities = 54/107 (50%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
 Frame = -3

Query: 325 MCSSKTPFSFSFEIDGLRTPFHKP-VDILNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 149
           M SSK   S S +ID  + P  KP V +LN   +S+VM+R I KQ +S+T +KL  N  S
Sbjct: 1   MYSSKPELSLSIKIDQTKFPLGKPAVFVLNQPNNSSVMFRVIVKQATSKTAAKLSLNPRS 60

Query: 148 LSRTCSFLGFGQDSVYRDKCKSRSLFELHSSSNVCFPILGFQKIGDI 8
            SRTCSFLGF QDS + +K K R LF  +SSS++C P LG +KIG++
Sbjct: 61  FSRTCSFLGFSQDSTFPEKFKVRPLFYFNSSSSICNPELGLRKIGEV 107


>ref|XP_022844747.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like
           isoform X1 [Olea europaea var. sylvestris]
          Length = 1059

 Score = 99.8 bits (247), Expect = 3e-21
 Identities = 54/107 (50%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
 Frame = -3

Query: 325 MCSSKTPFSFSFEIDGLRTPFHKP-VDILNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 149
           M SSK   S S +ID  + P  KP V +LN   +S+VM+R I KQ +S+T +KL  N  S
Sbjct: 1   MYSSKPELSLSIKIDQTKFPLGKPAVFVLNQPNNSSVMFRVIVKQATSKTAAKLSLNPRS 60

Query: 148 LSRTCSFLGFGQDSVYRDKCKSRSLFELHSSSNVCFPILGFQKIGDI 8
            SRTCSFLGF QDS + +K K R LF  +SSS++C P LG +KIG++
Sbjct: 61  FSRTCSFLGFSQDSTFPEKFKVRPLFYFNSSSSICNPELGLRKIGEV 107


>ref|XP_016445194.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial [Nicotiana tabacum]
          Length = 1020

 Score = 86.7 bits (213), Expect = 1e-16
 Identities = 50/106 (47%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
 Frame = -3

Query: 325 MCSSKTPFSFSFEIDGLRTPFHKPVDI-LNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 149
           M S+KTP S + +++       KP  + +NP+ +S +MWRNI KQ+SSRTP KL  +S  
Sbjct: 1   MSSTKTPISLTIKLNQFTD---KPTGLDINPYHNSPIMWRNIIKQLSSRTPQKLLFSSK- 56

Query: 148 LSRTCSFLGFGQDSVYRDKCKSRSLFELHSSSNVCFPILGFQKIGD 11
            +RT SFLGFGQDSV++D  K RSL  + S SN+   ++GFQ +G+
Sbjct: 57  -NRTYSFLGFGQDSVFKDNTKFRSLIPI-SCSNI---VMGFQNLGE 97


>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
           sylvestris]
 dbj|BAB78465.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
           sylvestris]
          Length = 1020

 Score = 86.3 bits (212), Expect = 2e-16
 Identities = 49/106 (46%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
 Frame = -3

Query: 325 MCSSKTPFSFSFEIDGLRTPFHKPVDI-LNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 149
           M S+KTP S + +++       KP  + +NP+ +S +MWRNI KQ+SSRTP KL  +S  
Sbjct: 1   MSSTKTPISLTIKLNQFTD---KPTGLDINPYHNSPIMWRNIIKQLSSRTPQKLLFSSK- 56

Query: 148 LSRTCSFLGFGQDSVYRDKCKSRSLFELHSSSNVCFPILGFQKIGD 11
            +RT SFLGFGQDS+++D  K RSL  + S SN+   ++GFQ +G+
Sbjct: 57  -NRTYSFLGFGQDSIFKDNTKFRSLIPI-SCSNI---VMGFQNLGE 97


>ref|NP_001289520.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
           [Nicotiana sylvestris]
 sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
           AltName: Full=T7 bacteriophage-type single subunit RNA
           polymerase 2; Flags: Precursor
 emb|CAC82575.2| phage-type RNA polymerase [Nicotiana sylvestris]
          Length = 1020

 Score = 86.3 bits (212), Expect = 2e-16
 Identities = 49/106 (46%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
 Frame = -3

Query: 325 MCSSKTPFSFSFEIDGLRTPFHKPVDI-LNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 149
           M S+KTP S + +++       KP  + +NP+ +S +MWRNI KQ+SSRTP KL  +S  
Sbjct: 1   MSSTKTPISLTIKLNQFTD---KPTGLDINPYHNSPIMWRNIIKQLSSRTPQKLLFSSK- 56

Query: 148 LSRTCSFLGFGQDSVYRDKCKSRSLFELHSSSNVCFPILGFQKIGD 11
            +RT SFLGFGQDS+++D  K RSL  + S SN+   ++GFQ +G+
Sbjct: 57  -NRTYSFLGFGQDSIFKDNTKFRSLIPI-SCSNI---VMGFQNLGE 97


>ref|XP_009619460.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial [Nicotiana tomentosiformis]
          Length = 1021

 Score = 83.2 bits (204), Expect = 2e-15
 Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
 Frame = -3

Query: 325 MCSSKTPFSFSFEIDGLRTPFHKPVDI-LNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 149
           M S+KTP S + +++       KP  + +N + +S +MWRNI KQ+SSRTP KL  +S +
Sbjct: 1   MSSTKTPISLTIKLNQFTD---KPTGLDINRYHNSPIMWRNIIKQLSSRTPQKLLFSSKN 57

Query: 148 LSRTCSFLGFGQDSVYRDKCKSRSLFELHSSSNVCFPILGFQKIGD 11
             RT SFLGFGQDSV++D  K RSL  + S SN+   ++GFQ +G+
Sbjct: 58  --RTYSFLGFGQDSVFKDNTKFRSLIPI-SCSNI---VMGFQNLGE 97


>ref|NP_001311818.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial
           [Nicotiana tabacum]
 sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial; AltName:
           Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
           single subunit RNA polymerase 2B; Flags: Precursor
 emb|CAC95020.1| mitochondrial and chloroplast RNA polymerase [Nicotiana tabacum]
          Length = 1021

 Score = 83.2 bits (204), Expect = 2e-15
 Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
 Frame = -3

Query: 325 MCSSKTPFSFSFEIDGLRTPFHKPVDI-LNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 149
           M S+KTP S + +++       KP  + +N + +S +MWRNI KQ+SSRTP KL  +S +
Sbjct: 1   MSSTKTPISLTIKLNQFTD---KPTGLDINRYHNSPIMWRNIIKQLSSRTPQKLLFSSKN 57

Query: 148 LSRTCSFLGFGQDSVYRDKCKSRSLFELHSSSNVCFPILGFQKIGD 11
             RT SFLGFGQDSV++D  K RSL  + S SN+   ++GFQ +G+
Sbjct: 58  --RTYSFLGFGQDSVFKDNTKFRSLIPI-SCSNI---VMGFQNLGE 97


>ref|XP_019234815.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial [Nicotiana attenuata]
 gb|OIT26485.1| dna-directed rna polymerase 2b, chloroplasticmitochondrial
           [Nicotiana attenuata]
          Length = 1024

 Score = 80.9 bits (198), Expect = 1e-14
 Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
 Frame = -3

Query: 325 MCSSKTPFSFSFEIDGLRTPFHKPVDI-LNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 149
           M S+KTP S + +++       KP  + +NP+ +S +MWRNI KQ+SSRTP KL  +S  
Sbjct: 1   MSSTKTPISLTIKLNQFTD---KPTGLAINPYHNSPIMWRNIIKQLSSRTPQKLLFSSK- 56

Query: 148 LSRTCSFLGFGQDSVYRDKCKSRSLFELHSSSNVCFPILGFQKIGD 11
            +RT SFLGF QDS+++D  K RSL  + S SN+    +GFQ +G+
Sbjct: 57  -NRTYSFLGFRQDSIFKDNTKFRSLIPI-SCSNI---EMGFQNLGE 97


>gb|PHT57010.1| DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial,
           partial [Capsicum baccatum]
          Length = 417

 Score = 78.2 bits (191), Expect = 8e-14
 Identities = 46/106 (43%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
 Frame = -3

Query: 325 MCSSKTPFSFSFEIDGLRTPFHKPVDI-LNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 149
           M S+KTP S + +       F++  D+  NP+ +S +MWRNI KQ SS TP KL  NS  
Sbjct: 1   MSSTKTPISLTIK-------FNQLTDLETNPYHNSPIMWRNILKQFSSTTPQKLLLNSK- 52

Query: 148 LSRTCSFLGFGQDSVYRDKCKSRSLFELHSSSNVCFPILGFQKIGD 11
            + TCSFLGF QDS ++D+ K R    +  S N  FP  GF+ +G+
Sbjct: 53  -NGTCSFLGFAQDSFFKDRTKFRPFIPVSCSIN-GFPETGFRNLGE 96


>ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial [Solanum tuberosum]
          Length = 1019

 Score = 77.0 bits (188), Expect = 3e-13
 Identities = 48/108 (44%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
 Frame = -3

Query: 325 MCSSKTPFSFSFEID---GLRTPFHKPVDILNPHKSSTVMWRNIAKQVSSRTPSKLFRNS 155
           M  +KTP S + + +    L T         NP+++S +MWRNI KQ SSRTP K+   S
Sbjct: 1   MSCTKTPISLTIKFNQFTNLET---------NPYQNSPIMWRNIVKQFSSRTPQKILLTS 51

Query: 154 HSLSRTCSFLGFGQDSVYRDKCKSRSLFELHSSSNVCFPILGFQKIGD 11
              +RT SFLGFGQDSV++DK   RS   + S SN  F  +GFQ +G+
Sbjct: 52  K--NRTYSFLGFGQDSVFKDKRILRSFIPV-SCSNSGFLEMGFQNLGE 96


>emb|CDP02357.1| unnamed protein product [Coffea canephora]
          Length = 1040

 Score = 76.6 bits (187), Expect = 4e-13
 Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 7/114 (6%)
 Frame = -3

Query: 325 MCSSKTPFSFSFEIDGLR-TPFHKP-VDILNPHKSSTVMWRNIAKQVSSRTP-----SKL 167
           M S+K+P S +  I  L   P +KP + +L P + STVMW+NIAK VSSRT        +
Sbjct: 1   MSSTKSPISLNINIGRLTPNPVYKPRIFLLKPPEISTVMWKNIAKLVSSRTLRTQEFGSI 60

Query: 166 FRNSHSLSRTCSFLGFGQDSVYRDKCKSRSLFELHSSSNVCFPILGFQKIGDIS 5
           F N HSL RT SFLGF QDS++ +K K  +L + +  S   F   GF+K+G+ S
Sbjct: 61  F-NPHSLPRTYSFLGFSQDSIFPEKFKFSTL-DFNPCSGNGFLEQGFRKVGEFS 112


>ref|XP_016561218.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial [Capsicum annuum]
          Length = 884

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
 Frame = -3

Query: 325 MCSSKTPFSFSFEIDGLRTPFHKPVDI-LNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 149
           M S+KTP S + +       F++  D+  NP+ +S +MWRNI KQ SS TP KL  NS  
Sbjct: 1   MSSTKTPISLTIK-------FNQLTDLETNPYHNSPIMWRNILKQFSSTTPQKLLLNSK- 52

Query: 148 LSRTCSFLGFGQDSVYRDKCKSRSLFELHSSSNVCFPILGFQKIGD 11
            +RT SFLGF QD  ++D+ K R    +  S N  FP  GF+ +G+
Sbjct: 53  -NRTYSFLGFAQDPFFKDRTKFRPFIPVSCSIN-GFPETGFRNLGE 96


>gb|PHT91663.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
           [Capsicum annuum]
          Length = 1015

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
 Frame = -3

Query: 325 MCSSKTPFSFSFEIDGLRTPFHKPVDI-LNPHKSSTVMWRNIAKQVSSRTPSKLFRNSHS 149
           M S+KTP S + +       F++  D+  NP+ +S +MWRNI KQ SS TP KL  NS  
Sbjct: 1   MSSTKTPISLTIK-------FNQLTDLETNPYHNSPIMWRNILKQFSSTTPQKLLLNSK- 52

Query: 148 LSRTCSFLGFGQDSVYRDKCKSRSLFELHSSSNVCFPILGFQKIGD 11
            +RT SFLGF QD  ++D+ K R    +  S N  FP  GF+ +G+
Sbjct: 53  -NRTYSFLGFAQDPFFKDRTKFRPFIPVSCSIN-GFPETGFRNLGE 96