BLASTX nr result
ID: Rehmannia31_contig00030708
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia31_contig00030708
(551 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AKN59248.1| polyprotein [Lychnis mottle virus] 233 4e-68
gb|AKN59246.1| polyprotein [Cnidium vein yellowing virus 2] 229 2e-67
gb|AKN59244.1| polyprotein [Cnidium vein yellowing virus 1] 225 4e-66
ref|YP_227375.1| large coat protein [Strawberry latent ringspot ... 183 3e-53
ref|YP_227368.1| 109 kDa polyprotein [Strawberry latent ringspot... 183 4e-50
gb|ADN88406.1| polyprotein, partial [Strawberry latent ringspot ... 181 6e-50
gb|ADN88404.1| polyprotein, partial [Strawberry latent ringspot ... 180 1e-49
emb|CAA54615.1| 98.8kD polyprotein [Strawberry latent ringspot v... 180 4e-49
gb|ADN88402.1| polyprotein, partial [Strawberry latent ringspot ... 178 4e-49
gb|ADN88405.1| polyprotein, partial [Strawberry latent ringspot ... 178 6e-49
gb|ADN88403.1| polyprotein, partial [Strawberry latent ringspot ... 178 6e-49
gb|AND74087.1| coat protein, partial [Strawberry latent ringspot... 142 2e-39
ref|WP_073463681.1| hypothetical protein [Enterococcus faecium] 54 1e-06
ref|WP_073470584.1| hypothetical protein [Enterococcus faecium] 54 2e-06
ref|WP_073463677.1| hypothetical protein [Enterococcus faecium] 54 2e-06
ref|WP_073463693.1| hypothetical protein [Enterococcus faecium] 54 2e-06
ref|WP_073463687.1| hypothetical protein [Enterococcus faecium] 52 5e-06
ref|WP_073463675.1| hypothetical protein [Enterococcus faecium] 52 5e-06
ref|WP_073463683.1| hypothetical protein [Enterococcus faecium] 52 7e-06
ref|WP_073470649.1| hypothetical protein [Enterococcus faecium] 52 9e-06
>gb|AKN59248.1| polyprotein [Lychnis mottle virus]
Length = 994
Score = 233 bits (594), Expect = 4e-68
Identities = 121/159 (76%), Positives = 125/159 (78%)
Frame = +1
Query: 1 VVLDYELSTTTSKGKAXXXXXXXXXXAHDEAQFYPSCSSSILENHRYWKGTLSLEVVFNL 180
VVLDYELSTTTSKGKA AHDEAQFYPSCSSSILENHRYWKG LSLEVVFNL
Sbjct: 570 VVLDYELSTTTSKGKALVLPLNPLLPAHDEAQFYPSCSSSILENHRYWKGVLSLEVVFNL 629
Query: 181 PAMAGGIAEFAFAYDTQDATEGDAYRRFGSSVVDLRAHRILRARVPXXXXXXXXXXXXXX 360
PAMAGGIAE AFAYDT + +GD YRRFGSSVVDLRAHRILRARVP
Sbjct: 630 PAMAGGIAELAFAYDTYNNADGDTYRRFGSSVVDLRAHRILRARVPLSGYGGYLAGGAGS 689
Query: 361 XFEVKPQTSFGDVLKLVILFTAPLHISYTSRKGYVLVRY 477
FEVKPQT FGDVLKLVILFTAPLHIS TS++G VLVRY
Sbjct: 690 LFEVKPQTGFGDVLKLVILFTAPLHISDTSKRGAVLVRY 728
>gb|AKN59246.1| polyprotein [Cnidium vein yellowing virus 2]
Length = 789
Score = 229 bits (583), Expect = 2e-67
Identities = 119/159 (74%), Positives = 124/159 (77%)
Frame = +1
Query: 1 VVLDYELSTTTSKGKAXXXXXXXXXXAHDEAQFYPSCSSSILENHRYWKGTLSLEVVFNL 180
VVLDYEL+TTT+KGKA AHD AQFYPSCSSSILENHRYWKGTLSLEVVFNL
Sbjct: 365 VVLDYELTTTTAKGKALVLPLNPLLPAHDGAQFYPSCSSSILENHRYWKGTLSLEVVFNL 424
Query: 181 PAMAGGIAEFAFAYDTQDATEGDAYRRFGSSVVDLRAHRILRARVPXXXXXXXXXXXXXX 360
PAMAGGIAE AFAYDT D +GD YRRFGSSVVDLRAHRILRARVP
Sbjct: 425 PAMAGGIAELAFAYDTYDNADGDTYRRFGSSVVDLRAHRILRARVPLSGYGGYLAGGSGS 484
Query: 361 XFEVKPQTSFGDVLKLVILFTAPLHISYTSRKGYVLVRY 477
FEVK QT FGDVLKLVILFTAPLHIS TS++G VLVRY
Sbjct: 485 LFEVKSQTGFGDVLKLVILFTAPLHISDTSKRGSVLVRY 523
>gb|AKN59244.1| polyprotein [Cnidium vein yellowing virus 1]
Length = 789
Score = 225 bits (574), Expect = 4e-66
Identities = 117/159 (73%), Positives = 121/159 (76%)
Frame = +1
Query: 1 VVLDYELSTTTSKGKAXXXXXXXXXXAHDEAQFYPSCSSSILENHRYWKGTLSLEVVFNL 180
VVLDYELSTTTSKGKA AHDEAQFYPSCSSSILENHRYWKG LSLEVVFNL
Sbjct: 365 VVLDYELSTTTSKGKALVLPLNPLLPAHDEAQFYPSCSSSILENHRYWKGVLSLEVVFNL 424
Query: 181 PAMAGGIAEFAFAYDTQDATEGDAYRRFGSSVVDLRAHRILRARVPXXXXXXXXXXXXXX 360
PAMAGGI E AFAY+T D +GD YRRFGSSVVDLRAHRILRARVP
Sbjct: 425 PAMAGGIVELAFAYNTYDNVDGDIYRRFGSSVVDLRAHRILRARVPLSGYGGYLAGGSGS 484
Query: 361 XFEVKPQTSFGDVLKLVILFTAPLHISYTSRKGYVLVRY 477
FEVKPQ GD LKLV+LFTAPLHIS TS+KG VLVRY
Sbjct: 485 LFEVKPQVGSGDTLKLVVLFTAPLHISDTSKKGSVLVRY 523
>ref|YP_227375.1| large coat protein [Strawberry latent ringspot virus]
Length = 388
Score = 183 bits (464), Expect = 3e-53
Identities = 94/159 (59%), Positives = 108/159 (67%)
Frame = +1
Query: 1 VVLDYELSTTTSKGKAXXXXXXXXXXAHDEAQFYPSCSSSILENHRYWKGTLSLEVVFNL 180
VV+D++LSTTT KGKA D AQ+YPSCSSSILENHRYWKGTL LEV+FNL
Sbjct: 203 VVVDFDLSTTTPKGKALVVPLNPLLPGFDGAQWYPSCSSSILENHRYWKGTLVLEVIFNL 262
Query: 181 PAMAGGIAEFAFAYDTQDATEGDAYRRFGSSVVDLRAHRILRARVPXXXXXXXXXXXXXX 360
PAM GG E FA D+ E DAYR FGS+VVDLRAHR+LRARVP
Sbjct: 263 PAMGGGTVEMGFANDSCSGRESDAYRYFGSTVVDLRAHRLLRARVPLHGYGGYLMGGSGS 322
Query: 361 XFEVKPQTSFGDVLKLVILFTAPLHISYTSRKGYVLVRY 477
F V P T +G L+ V+LFTAPLHIS T++KG V+VRY
Sbjct: 323 LFAVPPLTDYGQSLRFVLLFTAPLHISDTTKKGSVMVRY 361
>ref|YP_227368.1| 109 kDa polyprotein [Strawberry latent ringspot virus]
gb|AAW63129.1| 109 kDa polyprotein [Strawberry latent ringspot virus]
Length = 989
Score = 183 bits (464), Expect = 4e-50
Identities = 94/159 (59%), Positives = 108/159 (67%)
Frame = +1
Query: 1 VVLDYELSTTTSKGKAXXXXXXXXXXAHDEAQFYPSCSSSILENHRYWKGTLSLEVVFNL 180
VV+D++LSTTT KGKA D AQ+YPSCSSSILENHRYWKGTL LEV+FNL
Sbjct: 569 VVVDFDLSTTTPKGKALVVPLNPLLPGFDGAQWYPSCSSSILENHRYWKGTLVLEVIFNL 628
Query: 181 PAMAGGIAEFAFAYDTQDATEGDAYRRFGSSVVDLRAHRILRARVPXXXXXXXXXXXXXX 360
PAM GG E FA D+ E DAYR FGS+VVDLRAHR+LRARVP
Sbjct: 629 PAMGGGTVEMGFANDSCSGRESDAYRYFGSTVVDLRAHRLLRARVPLHGYGGYLMGGSGS 688
Query: 361 XFEVKPQTSFGDVLKLVILFTAPLHISYTSRKGYVLVRY 477
F V P T +G L+ V+LFTAPLHIS T++KG V+VRY
Sbjct: 689 LFAVPPLTDYGQSLRFVLLFTAPLHISDTTKKGSVMVRY 727
>gb|ADN88406.1| polyprotein, partial [Strawberry latent ringspot virus]
Length = 712
Score = 181 bits (458), Expect = 6e-50
Identities = 91/159 (57%), Positives = 108/159 (67%)
Frame = +1
Query: 1 VVLDYELSTTTSKGKAXXXXXXXXXXAHDEAQFYPSCSSSILENHRYWKGTLSLEVVFNL 180
VV+D++LSTTT KGKA D AQ+YPSCSSSILENHRYWKGTL LEV+FNL
Sbjct: 292 VVVDFDLSTTTPKGKALVVPLNPLLPGFDGAQWYPSCSSSILENHRYWKGTLVLEVIFNL 351
Query: 181 PAMAGGIAEFAFAYDTQDATEGDAYRRFGSSVVDLRAHRILRARVPXXXXXXXXXXXXXX 360
PAM GG E FA ++ E DAYR FGS+VVDLRAHR+LRA+VP
Sbjct: 352 PAMGGGTVEMGFANNSYSGWESDAYRHFGSTVVDLRAHRLLRAKVPLYGYGGYLMGGSGS 411
Query: 361 XFEVKPQTSFGDVLKLVILFTAPLHISYTSRKGYVLVRY 477
F V P T +G L+ V+LFTAPLHIS T++KG V++RY
Sbjct: 412 LFAVPPLTDYGQSLRFVLLFTAPLHISDTTKKGSVMIRY 450
>gb|ADN88404.1| polyprotein, partial [Strawberry latent ringspot virus]
Length = 712
Score = 180 bits (456), Expect = 1e-49
Identities = 91/159 (57%), Positives = 108/159 (67%)
Frame = +1
Query: 1 VVLDYELSTTTSKGKAXXXXXXXXXXAHDEAQFYPSCSSSILENHRYWKGTLSLEVVFNL 180
VV+D++LSTTT KGKA D AQ+YPSCSSSILENHRYWKGTL LEV+FNL
Sbjct: 292 VVVDFDLSTTTPKGKALVIPLNPLLPGFDGAQWYPSCSSSILENHRYWKGTLVLEVIFNL 351
Query: 181 PAMAGGIAEFAFAYDTQDATEGDAYRRFGSSVVDLRAHRILRARVPXXXXXXXXXXXXXX 360
PAM GG E FA ++ E DAYR FGS+VVDLRAHR+LRA+VP
Sbjct: 352 PAMGGGTVEMGFANNSYSGWESDAYRYFGSTVVDLRAHRLLRAKVPLYGYGGYLMGGSGS 411
Query: 361 XFEVKPQTSFGDVLKLVILFTAPLHISYTSRKGYVLVRY 477
F V P T +G L+ V+LFTAPLHIS T++KG V++RY
Sbjct: 412 LFAVPPLTDYGQSLRFVLLFTAPLHISDTTKKGSVMIRY 450
>emb|CAA54615.1| 98.8kD polyprotein [Strawberry latent ringspot virus]
Length = 890
Score = 180 bits (456), Expect = 4e-49
Identities = 92/159 (57%), Positives = 107/159 (67%)
Frame = +1
Query: 1 VVLDYELSTTTSKGKAXXXXXXXXXXAHDEAQFYPSCSSSILENHRYWKGTLSLEVVFNL 180
VV+D++LSTTT KGKA D AQ+YPSCSSSILENHRYWKGTL LEV+FNL
Sbjct: 446 VVVDFDLSTTTPKGKALVVPLNPLLPGFDGAQWYPSCSSSILENHRYWKGTLVLEVIFNL 505
Query: 181 PAMAGGIAEFAFAYDTQDATEGDAYRRFGSSVVDLRAHRILRARVPXXXXXXXXXXXXXX 360
PAM GG E FA D+ E DAYR FGS+VVDLRAHR+LRA+VP
Sbjct: 506 PAMGGGTVEMGFANDSYSGWESDAYRYFGSTVVDLRAHRLLRAKVPLHGYGGYLMGGSGS 565
Query: 361 XFEVKPQTSFGDVLKLVILFTAPLHISYTSRKGYVLVRY 477
F V P T +G L+ V+LFTAPLHIS T++ G V+VRY
Sbjct: 566 LFAVPPLTDYGQSLRFVLLFTAPLHISDTTKTGSVMVRY 604
>gb|ADN88402.1| polyprotein, partial [Strawberry latent ringspot virus]
Length = 712
Score = 178 bits (452), Expect = 4e-49
Identities = 90/159 (56%), Positives = 108/159 (67%)
Frame = +1
Query: 1 VVLDYELSTTTSKGKAXXXXXXXXXXAHDEAQFYPSCSSSILENHRYWKGTLSLEVVFNL 180
VV+D++LSTTT KGKA D AQ+YPSCSSSILENHRYWKGTL LEV+FNL
Sbjct: 292 VVVDFDLSTTTPKGKALVVPLNPLLPGFDGAQWYPSCSSSILENHRYWKGTLVLEVIFNL 351
Query: 181 PAMAGGIAEFAFAYDTQDATEGDAYRRFGSSVVDLRAHRILRARVPXXXXXXXXXXXXXX 360
PAM GG E FA ++ E DAYR FGS+VVDLRAHR+LRA+VP
Sbjct: 352 PAMGGGTVEMGFANNSYSGWESDAYRYFGSTVVDLRAHRLLRAKVPLYGYGGYLMGGSGS 411
Query: 361 XFEVKPQTSFGDVLKLVILFTAPLHISYTSRKGYVLVRY 477
F V P T +G L+ V+LFTAPLHIS T++KG V++R+
Sbjct: 412 LFAVPPLTDYGQSLRFVLLFTAPLHISDTTKKGSVMIRF 450
>gb|ADN88405.1| polyprotein, partial [Strawberry latent ringspot virus]
Length = 712
Score = 178 bits (451), Expect = 6e-49
Identities = 90/159 (56%), Positives = 107/159 (67%)
Frame = +1
Query: 1 VVLDYELSTTTSKGKAXXXXXXXXXXAHDEAQFYPSCSSSILENHRYWKGTLSLEVVFNL 180
VV+D++LSTTT KGKA D AQ+YPSCSSSILENHRYWKGTL LEV+FNL
Sbjct: 292 VVVDFDLSTTTPKGKALVVPLNPLLPGFDGAQWYPSCSSSILENHRYWKGTLVLEVIFNL 351
Query: 181 PAMAGGIAEFAFAYDTQDATEGDAYRRFGSSVVDLRAHRILRARVPXXXXXXXXXXXXXX 360
PAM GG E FA ++ E DAYR FGS+VVDLRAHR+LRA+VP
Sbjct: 352 PAMGGGTVEMGFANNSYSGWESDAYRYFGSTVVDLRAHRLLRAKVPLYGYGGYLMGGSGS 411
Query: 361 XFEVKPQTSFGDVLKLVILFTAPLHISYTSRKGYVLVRY 477
F V P T +G L+ V+LFTAPLHIS ++KG V++RY
Sbjct: 412 LFAVPPLTDYGQSLRFVLLFTAPLHISDATKKGSVMIRY 450
>gb|ADN88403.1| polyprotein, partial [Strawberry latent ringspot virus]
Length = 712
Score = 178 bits (451), Expect = 6e-49
Identities = 90/159 (56%), Positives = 107/159 (67%)
Frame = +1
Query: 1 VVLDYELSTTTSKGKAXXXXXXXXXXAHDEAQFYPSCSSSILENHRYWKGTLSLEVVFNL 180
VV+D++LSTTT KGKA D AQ+YPSCSSSILENHRYWKGTL LEV+FNL
Sbjct: 292 VVVDFDLSTTTPKGKALVVPLNPLLPGFDGAQWYPSCSSSILENHRYWKGTLVLEVIFNL 351
Query: 181 PAMAGGIAEFAFAYDTQDATEGDAYRRFGSSVVDLRAHRILRARVPXXXXXXXXXXXXXX 360
PAM GG E FA ++ E DAYR FGS+VVDLRAHR+LRA+VP
Sbjct: 352 PAMGGGTVEMGFANNSYSGWESDAYRYFGSTVVDLRAHRLLRAKVPLYGYGGYLMGGSGS 411
Query: 361 XFEVKPQTSFGDVLKLVILFTAPLHISYTSRKGYVLVRY 477
F V P T +G L+ V+LFTAPLHIS ++KG V++RY
Sbjct: 412 LFAVPPLTDYGQSLRFVLLFTAPLHISDATKKGSVMIRY 450
>gb|AND74087.1| coat protein, partial [Strawberry latent ringspot virus]
Length = 200
Score = 142 bits (358), Expect = 2e-39
Identities = 70/106 (66%), Positives = 80/106 (75%)
Frame = +1
Query: 1 VVLDYELSTTTSKGKAXXXXXXXXXXAHDEAQFYPSCSSSILENHRYWKGTLSLEVVFNL 180
VV+D++LSTTTSKGKA D AQ+YPSCSSSILENHRYWKGTL LEV+FNL
Sbjct: 82 VVVDFDLSTTTSKGKALVVPLNPLLPGFDGAQWYPSCSSSILENHRYWKGTLVLEVIFNL 141
Query: 181 PAMAGGIAEFAFAYDTQDATEGDAYRRFGSSVVDLRAHRILRARVP 318
PAM GG E FA ++ E DAYR FGS+VVDLRAHR+LRA+VP
Sbjct: 142 PAMGGGTVEMGFANNSYSGWESDAYRYFGSTVVDLRAHRLLRAKVP 187
>ref|WP_073463681.1| hypothetical protein [Enterococcus faecium]
Length = 61
Score = 53.9 bits (128), Expect = 1e-06
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +2
Query: 464 FWLGIFFFKQKTAYEITYGDWSSDVCSSD 550
F+ FFFKQKTAYEI +GDWSSDVCSSD
Sbjct: 10 FFFFFFFFKQKTAYEIAHGDWSSDVCSSD 38
>ref|WP_073470584.1| hypothetical protein [Enterococcus faecium]
Length = 61
Score = 53.5 bits (127), Expect = 2e-06
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = -3
Query: 549 SEEHTSELQSPYVISYAVFCLKKKIPNQNIPL 454
SEEHTSELQSP ISYAVFCLKKK Q+IPL
Sbjct: 30 SEEHTSELQSPVPISYAVFCLKKKKKKQDIPL 61
>ref|WP_073463677.1| hypothetical protein [Enterococcus faecium]
Length = 63
Score = 53.5 bits (127), Expect = 2e-06
Identities = 26/41 (63%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
Frame = +2
Query: 434 ISVIPQERGM--FWLGIFFFKQKTAYEITYGDWSSDVCSSD 550
++V+ GM +L FFFKQKTAYEI +GDWSSDVCSSD
Sbjct: 4 MNVLMTSYGMSFIFLFFFFFKQKTAYEIAHGDWSSDVCSSD 44
>ref|WP_073463693.1| hypothetical protein [Enterococcus faecium]
Length = 83
Score = 53.9 bits (128), Expect = 2e-06
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +2
Query: 461 MFWLGIFFFKQKTAYEITYGDWSSDVCSSD 550
+F+ FFFKQKTAYEI +GDWSSDVCSSD
Sbjct: 8 VFFFLFFFFKQKTAYEIAHGDWSSDVCSSD 37
>ref|WP_073463687.1| hypothetical protein [Enterococcus faecium]
Length = 66
Score = 52.4 bits (124), Expect = 5e-06
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +2
Query: 479 FFFKQKTAYEITYGDWSSDVCSSD 550
FFFKQKTAYEI +GDWSSDVCSSD
Sbjct: 5 FFFKQKTAYEIAHGDWSSDVCSSD 28
>ref|WP_073463675.1| hypothetical protein [Enterococcus faecium]
Length = 72
Score = 52.4 bits (124), Expect = 5e-06
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +2
Query: 479 FFFKQKTAYEITYGDWSSDVCSSD 550
FFFKQKTAYEI +GDWSSDVCSSD
Sbjct: 26 FFFKQKTAYEIAHGDWSSDVCSSD 49
>ref|WP_073463683.1| hypothetical protein [Enterococcus faecium]
Length = 84
Score = 52.4 bits (124), Expect = 7e-06
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +2
Query: 479 FFFKQKTAYEITYGDWSSDVCSSD 550
FFFKQKTAYEI +GDWSSDVCSSD
Sbjct: 12 FFFKQKTAYEIAHGDWSSDVCSSD 35
>ref|WP_073470649.1| hypothetical protein [Enterococcus faecium]
Length = 92
Score = 52.4 bits (124), Expect = 9e-06
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +2
Query: 440 VIPQERGMFWLGIFFFKQKTAYEITYGDWSSDVCSSD 550
++P F+ FFFKQKTAYEI GDWSSDVCSSD
Sbjct: 6 LLPVYSFFFFFFFFFFKQKTAYEIGTGDWSSDVCSSD 42