BLASTX nr result

ID: Rehmannia31_contig00030540 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00030540
         (523 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP12858.1| unnamed protein product [Coffea canephora]             57   8e-08
gb|OMO92646.1| hypothetical protein COLO4_17423 [Corchorus olito...    56   2e-07
ref|XP_003630150.1| transmembrane protein, putative [Medicago tr...    55   3e-07
ref|XP_006380481.1| hypothetical protein POPTR_0007s07020g [Popu...    54   1e-06
gb|OMO74620.1| hypothetical protein CCACVL1_16579 [Corchorus cap...    53   3e-06
gb|PNT27670.1| hypothetical protein POPTR_007G077300v3 [Populus ...    52   1e-05

>emb|CDP12858.1| unnamed protein product [Coffea canephora]
          Length = 72

 Score = 57.0 bits (136), Expect = 8e-08
 Identities = 28/63 (44%), Positives = 41/63 (65%)
 Frame = -2

Query: 522 FLLCFISTSSQGRNLSMKNVPQPPNLANEKGKEMVARKEEVPDSEELVVIDYTPARKKTP 343
           FLLCF+  ++Q R+      P+      +   +M++  +EVP SEEL ++DY+PARKKTP
Sbjct: 15  FLLCFLLVTAQARS-----TPRESRGVEKADDKMLSTTKEVPTSEELEMMDYSPARKKTP 69

Query: 342 IHN 334
           IHN
Sbjct: 70  IHN 72


>gb|OMO92646.1| hypothetical protein COLO4_17423 [Corchorus olitorius]
          Length = 75

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 28/62 (45%), Positives = 39/62 (62%)
 Frame = -2

Query: 519 LLCFISTSSQGRNLSMKNVPQPPNLANEKGKEMVARKEEVPDSEELVVIDYTPARKKTPI 340
           LLCFIST+++GR  S+   P  P       + + A ++   + EELV +DYTPAR+K PI
Sbjct: 16  LLCFISTTTRGR--SLPKAPSAPEKGAHGDEVVTATQDGDSNVEELVAVDYTPARRKPPI 73

Query: 339 HN 334
           HN
Sbjct: 74  HN 75


>ref|XP_003630150.1| transmembrane protein, putative [Medicago truncatula]
 gb|AET04626.1| transmembrane protein, putative [Medicago truncatula]
 gb|AFK34938.1| unknown [Medicago truncatula]
          Length = 77

 Score = 55.5 bits (132), Expect = 3e-07
 Identities = 28/63 (44%), Positives = 36/63 (57%)
 Frame = -2

Query: 522 FLLCFISTSSQGRNLSMKNVPQPPNLANEKGKEMVARKEEVPDSEELVVIDYTPARKKTP 343
           FL+CFIS  ++ R L  K+     N  N K   M   KEE    +E+  +DYTPAR+K P
Sbjct: 15  FLICFISIQARARTLKEKSNDVTSNTHNNKEDHMFKAKEEHNVGDEVFSMDYTPARRKPP 74

Query: 342 IHN 334
           IHN
Sbjct: 75  IHN 77


>ref|XP_006380481.1| hypothetical protein POPTR_0007s07020g [Populus trichocarpa]
 gb|PNT27668.1| hypothetical protein POPTR_007G077300v3 [Populus trichocarpa]
 gb|PNT27669.1| hypothetical protein POPTR_007G077300v3 [Populus trichocarpa]
          Length = 75

 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 33/66 (50%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
 Frame = -2

Query: 522 FLLCFISTSSQGRNLSMKNVPQPPNLANEKG--KEMVARKEE-VPDSEELVVIDYTPARK 352
           FLLCF+ST ++ R L      +  N   EK    +M   KE  +PD EELV +DYTPARK
Sbjct: 15  FLLCFVSTCARARTLR-----EASNHGAEKKDQNDMFPSKENGLPDVEELVGMDYTPARK 69

Query: 351 KTPIHN 334
           K PIHN
Sbjct: 70  KPPIHN 75


>gb|OMO74620.1| hypothetical protein CCACVL1_16579 [Corchorus capsularis]
          Length = 75

 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 27/62 (43%), Positives = 38/62 (61%)
 Frame = -2

Query: 519 LLCFISTSSQGRNLSMKNVPQPPNLANEKGKEMVARKEEVPDSEELVVIDYTPARKKTPI 340
           LLCFIST+++ R  S+   P  P   +     + A ++   + EELV +DYTPAR+K PI
Sbjct: 16  LLCFISTTTKAR--SLPKAPSTPEKGHGDEVVLTATQDGDSNVEELVAVDYTPARRKPPI 73

Query: 339 HN 334
           HN
Sbjct: 74  HN 75


>gb|PNT27670.1| hypothetical protein POPTR_007G077300v3 [Populus trichocarpa]
          Length = 76

 Score = 51.6 bits (122), Expect = 1e-05
 Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
 Frame = -2

Query: 522 FLLCFISTSSQGRNLSMKNVPQPPNLANEKG--KEMVARKEE-VPDSEELVVIDYTPARK 352
           FLLCF+ST ++    + + + +  N   EK    +M   KE  +PD EELV +DYTPARK
Sbjct: 15  FLLCFVSTCAR----AARTLREASNHGAEKKDQNDMFPSKENGLPDVEELVGMDYTPARK 70

Query: 351 KTPIHN 334
           K PIHN
Sbjct: 71  KPPIHN 76


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