BLASTX nr result

ID: Rehmannia31_contig00030090 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00030090
         (371 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011080323.1| protein EARLY FLOWERING 3 [Sesamum indicum] ...    86   5e-17

>ref|XP_011080323.1| protein EARLY FLOWERING 3 [Sesamum indicum]
 ref|XP_020553346.1| protein EARLY FLOWERING 3 [Sesamum indicum]
 ref|XP_020553349.1| protein EARLY FLOWERING 3 [Sesamum indicum]
 ref|XP_020553352.1| protein EARLY FLOWERING 3 [Sesamum indicum]
          Length = 756

 Score = 85.9 bits (211), Expect = 5e-17
 Identities = 62/160 (38%), Positives = 84/160 (52%), Gaps = 41/160 (25%)
 Frame = +1

Query: 1   LQSGKTINYKNFQLLGDKEKVDPFSSIYSPEFRNGCLKLPKETGS-------CRNLSDEK 159
           LQSGK +NY N QL  DK K+  FSSI S E  + CLKL KET S        +NL+ E+
Sbjct: 176 LQSGKALNYGNLQLHPDKGKLPTFSSISSHELHDACLKLAKETRSGDQATEHHKNLA-ER 234

Query: 160 NSKLSQNDE----------KIGEKITSDA----------------------EKGRLRDFY 243
           NS+LS N++           IG++++S+                       E+  LRD Y
Sbjct: 235 NSRLSHNNDNCSERPLLISSIGDQVSSEKKISEVATSTLQPNQHKKISFGDERSTLRDPY 294

Query: 244 AQPRKENKILLKTETVSD--DGMSEKVMRKRCASAMEIST 357
            QPR++ KIL + +TV+D   G  E   RKRCAS M+ S+
Sbjct: 295 TQPRRQCKILPRMKTVTDVTSGTPETATRKRCASVMDDSS 334


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