BLASTX nr result
ID: Rehmannia31_contig00030070
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia31_contig00030070
(472 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012834852.1| PREDICTED: pentatricopeptide repeat-containi... 92 2e-18
gb|PIN20393.1| hypothetical protein CDL12_06915 [Handroanthus im... 86 2e-16
ref|XP_011084698.1| pentatricopeptide repeat-containing protein ... 80 2e-14
gb|EYU39754.1| hypothetical protein MIMGU_mgv1a001778mg [Erythra... 71 2e-11
ref|XP_022853928.1| pentatricopeptide repeat-containing protein ... 66 1e-09
ref|XP_006353247.1| PREDICTED: pentatricopeptide repeat-containi... 62 5e-08
ref|XP_015056848.1| PREDICTED: pentatricopeptide repeat-containi... 60 2e-07
ref|XP_019261502.1| PREDICTED: pentatricopeptide repeat-containi... 59 6e-07
ref|XP_009604736.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
ref|XP_004250507.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
gb|PHT99965.1| Pentatricopeptide repeat-containing protein [Caps... 56 4e-06
gb|PHT64997.1| Pentatricopeptide repeat-containing protein [Caps... 56 4e-06
gb|PHT31321.1| Pentatricopeptide repeat-containing protein [Caps... 56 4e-06
ref|XP_016551922.1| PREDICTED: pentatricopeptide repeat-containi... 56 4e-06
>ref|XP_012834852.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Erythranthe guttata]
Length = 833
Score = 91.7 bits (226), Expect = 2e-18
Identities = 51/94 (54%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Frame = +2
Query: 194 HCTRIMRHGHRGKTMAVFHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LGNLLIVA 370
+C RIMRHG RGKTMA+FHH LGNLLIVA
Sbjct: 8 YCIRIMRHGRRGKTMALFHHSASFLRRPLSPKSRFTTAAKSTNGAVSGTASELGNLLIVA 67
Query: 371 SIAKTLSKPGGIYTLEKDGDSIPLSEDLILQVLR 472
+IAKTLS PGGI++LEKD DSIPLSE+L+LQVLR
Sbjct: 68 AIAKTLSNPGGIHSLEKDADSIPLSENLVLQVLR 101
>gb|PIN20393.1| hypothetical protein CDL12_06915 [Handroanthus impetiginosus]
Length = 823
Score = 85.5 bits (210), Expect = 2e-16
Identities = 47/88 (53%), Positives = 52/88 (59%)
Frame = +2
Query: 209 MRHGHRGKTMAVFHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGNLLIVASIAKTL 388
MRHG RG+ MA+ H LGNLLIVASIAK L
Sbjct: 1 MRHGPRGRRMAMLHRSIHLLQPFCSRFRFTEAEKAANGAKAGAATELGNLLIVASIAKAL 60
Query: 389 SKPGGIYTLEKDGDSIPLSEDLILQVLR 472
SKPGGIY+LEKDGDSIPLSED++LQVLR
Sbjct: 61 SKPGGIYSLEKDGDSIPLSEDVVLQVLR 88
>ref|XP_011084698.1| pentatricopeptide repeat-containing protein At4g01570 [Sesamum
indicum]
Length = 831
Score = 79.7 bits (195), Expect = 2e-14
Identities = 43/88 (48%), Positives = 51/88 (57%)
Frame = +2
Query: 209 MRHGHRGKTMAVFHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGNLLIVASIAKTL 388
MRHG G+ +A+ HH LGNLL+VASIAK L
Sbjct: 1 MRHGQSGRRIALLHHSVAFLAPFCSRISFSTAVKASGGAEVGTASKLGNLLVVASIAKAL 60
Query: 389 SKPGGIYTLEKDGDSIPLSEDLILQVLR 472
S+PGGI++LEK GDSIPLSEDL+LQVLR
Sbjct: 61 SRPGGIHSLEKYGDSIPLSEDLVLQVLR 88
>gb|EYU39754.1| hypothetical protein MIMGU_mgv1a001778mg [Erythranthe guttata]
Length = 760
Score = 71.2 bits (173), Expect = 2e-11
Identities = 35/42 (83%), Positives = 40/42 (95%)
Frame = +2
Query: 347 LGNLLIVASIAKTLSKPGGIYTLEKDGDSIPLSEDLILQVLR 472
LGNLLIVA+IAKTLS PGGI++LEKD DSIPLSE+L+LQVLR
Sbjct: 39 LGNLLIVAAIAKTLSNPGGIHSLEKDADSIPLSENLVLQVLR 80
>ref|XP_022853928.1| pentatricopeptide repeat-containing protein At4g01570 [Olea
europaea var. sylvestris]
Length = 815
Score = 66.2 bits (160), Expect = 1e-09
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = +2
Query: 347 LGNLLIVASIAKTLSKPGGIYTLEKDGDSIPLSEDLILQVLR 472
LGNLL+VASIAK LSKPGG+ +LEKD DSI LSEDL+LQ+LR
Sbjct: 34 LGNLLVVASIAKALSKPGGVKSLEKDIDSISLSEDLVLQLLR 75
>ref|XP_006353247.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Solanum tuberosum]
Length = 816
Score = 61.6 bits (148), Expect = 5e-08
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +2
Query: 347 LGNLLIVASIAKTLSKPGGIYTLEKDGDSIPLSEDLILQVLR 472
+GNLL+VASIAK L KPGG LE+ GDSIPLSE L+LQVLR
Sbjct: 37 VGNLLVVASIAKALIKPGGTRNLEQYGDSIPLSESLVLQVLR 78
>ref|XP_015056848.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Solanum pennellii]
ref|XP_015056849.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Solanum pennellii]
Length = 819
Score = 60.1 bits (144), Expect = 2e-07
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +2
Query: 347 LGNLLIVASIAKTLSKPGGIYTLEKDGDSIPLSEDLILQVLR 472
+GNL++VASIAK L KPGG LEK GD IPLSE L+LQVLR
Sbjct: 40 VGNLIVVASIAKALIKPGGTRNLEKYGDLIPLSESLVLQVLR 81
>ref|XP_019261502.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Nicotiana attenuata]
gb|OIT38450.1| pentatricopeptide repeat-containing protein [Nicotiana attenuata]
Length = 816
Score = 58.5 bits (140), Expect = 6e-07
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = +2
Query: 347 LGNLLIVASIAKTLSKPGGIYTLEKDGDSIPLSEDLILQVLR 472
+GNLL+VASI K L+ PGG LEK DSIPLSE+L+LQ+LR
Sbjct: 36 IGNLLVVASITKALTAPGGTRNLEKYNDSIPLSENLVLQILR 77
>ref|XP_009604736.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Nicotiana tomentosiformis]
ref|XP_016505086.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Nicotiana tabacum]
ref|XP_016505087.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Nicotiana tabacum]
Length = 816
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/42 (66%), Positives = 33/42 (78%)
Frame = +2
Query: 347 LGNLLIVASIAKTLSKPGGIYTLEKDGDSIPLSEDLILQVLR 472
+GNLL+VASI K L+ PGG LEK DSIPLSE L+LQ+LR
Sbjct: 36 IGNLLVVASITKALTAPGGTRNLEKYNDSIPLSETLVLQILR 77
>ref|XP_004250507.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
[Solanum lycopersicum]
Length = 819
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = +2
Query: 347 LGNLLIVASIAKTLSKPGGIYTLEKDGDSIPLSEDLILQVLR 472
+GNL++VASIAK L K GG LEK GD IPLSE L+LQVLR
Sbjct: 40 VGNLIVVASIAKALIKRGGTRNLEKYGDLIPLSESLVLQVLR 81
>gb|PHT99965.1| Pentatricopeptide repeat-containing protein [Capsicum chinense]
Length = 813
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/42 (59%), Positives = 36/42 (85%)
Frame = +2
Query: 347 LGNLLIVASIAKTLSKPGGIYTLEKDGDSIPLSEDLILQVLR 472
+GNLL++ASI K+LSKPGGI+ LE +++PL+E L+LQ+LR
Sbjct: 31 IGNLLLIASITKSLSKPGGIHNLEHYTNTLPLTETLVLQILR 72
>gb|PHT64997.1| Pentatricopeptide repeat-containing protein [Capsicum annuum]
Length = 813
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/42 (59%), Positives = 36/42 (85%)
Frame = +2
Query: 347 LGNLLIVASIAKTLSKPGGIYTLEKDGDSIPLSEDLILQVLR 472
+GNLL++ASI K+LSKPGGI+ LE +++PL+E L+LQ+LR
Sbjct: 31 IGNLLLIASITKSLSKPGGIHNLEHYTNTLPLTETLVLQILR 72
>gb|PHT31321.1| Pentatricopeptide repeat-containing protein [Capsicum baccatum]
Length = 813
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/42 (59%), Positives = 36/42 (85%)
Frame = +2
Query: 347 LGNLLIVASIAKTLSKPGGIYTLEKDGDSIPLSEDLILQVLR 472
+GNLL++ASI K+LSKPGGI+ LE +++PL+E L+LQ+LR
Sbjct: 31 IGNLLLIASITKSLSKPGGIHNLEHYTNTLPLTETLVLQILR 72
>ref|XP_016551922.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Capsicum annuum]
ref|XP_016551923.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Capsicum annuum]
ref|XP_016551924.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Capsicum annuum]
ref|XP_016551925.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Capsicum annuum]
ref|XP_016551926.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Capsicum annuum]
Length = 813
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/42 (59%), Positives = 36/42 (85%)
Frame = +2
Query: 347 LGNLLIVASIAKTLSKPGGIYTLEKDGDSIPLSEDLILQVLR 472
+GNLL++ASI K+LSKPGGI+ LE +++PL+E L+LQ+LR
Sbjct: 31 IGNLLLIASITKSLSKPGGIHNLEHYTNTLPLTETLVLQILR 72