BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00029893
         (667 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011076184.1| DNA mismatch repair protein MSH3 [Sesamum in...    91   2e-17
gb|PIN15683.1| Mismatch repair MSH3 [Handroanthus impetiginosus]       61   3e-07

>ref|XP_011076184.1| DNA mismatch repair protein MSH3 [Sesamum indicum]
          Length = 1107

 Score = 91.3 bits (225), Expect = 2e-17
 Identities = 47/70 (67%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
 Frame = -3

Query: 662  PIDKSEDAEEDAYLPPNCLQTAPIETLEDVEKAYRDLFFYLNTALH-NEDVAKRFNSLKH 486
            P DKSE+A+EDAY+P +CL+TA    LE++EKAYRDLFF+LN A H  ED AKR  SLK 
Sbjct: 1037 PNDKSENAKEDAYIPMDCLRTAGTRNLEEIEKAYRDLFFHLNLAFHEEEDAAKRLCSLKL 1096

Query: 485  AKSLANKLLN 456
            AKSLA KLLN
Sbjct: 1097 AKSLAGKLLN 1106


>gb|PIN15683.1| Mismatch repair MSH3 [Handroanthus impetiginosus]
          Length = 1116

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 34/70 (48%), Positives = 46/70 (65%)
 Frame = -3

Query: 662  PIDKSEDAEEDAYLPPNCLQTAPIETLEDVEKAYRDLFFYLNTALHNEDVAKRFNSLKHA 483
            P DKS D +E+AY          IE LE VE+ YRD+F  +N A H +DV K+F SLK A
Sbjct: 1039 PNDKSSDVKENAYA---------IENLEQVEETYRDIFSLVNNAFH-KDVEKKFYSLKRA 1088

Query: 482  KSLANKLLNS 453
            +SLAN+L+++
Sbjct: 1089 RSLANRLVHA 1098