BLASTX nr result

ID: Rehmannia31_contig00029518 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00029518
         (314 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011077821.1| ubiquitin carboxyl-terminal hydrolase 15 [Se...    69   2e-11
gb|PIN23232.1| Ubiquitinyl hydrolase 1 [Handroanthus impetiginosus]    64   2e-09
gb|PIN23230.1| Ubiquitin carboxyl-terminal hydrolase [Handroanth...    58   2e-07
gb|PIN10681.1| Ubiquitin-specific protease [Handroanthus impetig...    55   2e-06

>ref|XP_011077821.1| ubiquitin carboxyl-terminal hydrolase 15 [Sesamum indicum]
          Length = 979

 Score = 69.3 bits (168), Expect = 2e-11
 Identities = 49/129 (37%), Positives = 62/129 (48%), Gaps = 32/129 (24%)
 Frame = +2

Query: 2   SEGSFGRISFA--ETTEQCSSKYNVQQPSFDNAS-SDAISPPXXXXXXXXXXXXXXXXXX 172
           SEGS+   S +  +T EQCSS+YN+ QPS D AS  D +SPP                  
Sbjct: 130 SEGSYQGTSLSCDKTMEQCSSQYNMWQPSVDKASLEDVVSPPSTTLTSATASSVMPSTAG 189

Query: 173 KSIINRRSSE------------------------DVSGMEITH-----SSEDAYLGKDDF 265
           KS+INRRS+E                        +VSG   TH     S EDAYL + D 
Sbjct: 190 KSVINRRSTEICSLLKGNRDSSRKADRAALKSPKEVSGFCFTHPPLVQSPEDAYLREGDC 249

Query: 266 ILSKHHANI 292
           +LS+HHAN+
Sbjct: 250 VLSEHHANV 258


>gb|PIN23232.1| Ubiquitinyl hydrolase 1 [Handroanthus impetiginosus]
          Length = 578

 Score = 63.5 bits (153), Expect = 2e-09
 Identities = 46/118 (38%), Positives = 56/118 (47%), Gaps = 30/118 (25%)
 Frame = +2

Query: 2   SEGSFGRISFAETTEQCSSKYNVQQPSFDNASS-DAISPPXXXXXXXXXXXXXXXXXXKS 178
           +EGS GR+ +AETTEQCS +YNVQQPS D ASS DA SPP                    
Sbjct: 130 NEGSSGRVLYAETTEQCSYEYNVQQPSADIASSLDAFSPPLTTVVSPTTSGVTLSKSGNF 189

Query: 179 IINR------------------------RSSEDVSGMEITH-----SSEDAYLGKDDF 265
           + N+                        RSSE++SG+  TH     SSE+A L K DF
Sbjct: 190 VTNQRSAETSTLPEGSRDSSGRADGAVLRSSEELSGIGFTHPTFSQSSEEANLRKGDF 247


>gb|PIN23230.1| Ubiquitin carboxyl-terminal hydrolase [Handroanthus impetiginosus]
          Length = 882

 Score = 57.8 bits (138), Expect = 2e-07
 Identities = 44/118 (37%), Positives = 54/118 (45%), Gaps = 30/118 (25%)
 Frame = +2

Query: 2   SEGSFGRISFAETTEQCSSKYNVQQPSFDNASS-DAISPPXXXXXXXXXXXXXXXXXXKS 178
           +EGS  R+ +AETTEQCS +YNVQQPS D ASS DA SPP                    
Sbjct: 130 NEGSSRRVLYAETTEQCSYEYNVQQPSADIASSLDAFSPPLTTVVSPTTSGVTLSKSGNF 189

Query: 179 IINR------------------------RSSEDVSGMEITH-----SSEDAYLGKDDF 265
           + N+                        RSSE++SG+  TH     S E+A L K DF
Sbjct: 190 VTNQRSAETSTLPKGNRDSSGRADRAVLRSSEELSGIGFTHPTFSQSLEEADLRKGDF 247


>gb|PIN10681.1| Ubiquitin-specific protease [Handroanthus impetiginosus]
          Length = 754

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 30/118 (25%)
 Frame = +2

Query: 2   SEGSFGRISFAETTEQCSSKYNVQQPSFDNASS-DAISPPXXXXXXXXXXXXXXXXXXKS 178
           +EGS GR+ +AETTEQCS +YN QQPS D ASS DA SP                     
Sbjct: 130 NEGSSGRVLYAETTEQCSYEYNDQQPSADIASSLDAFSPTLTTVVSPTTSGVTLSKSGNF 189

Query: 179 IINR------------------------RSSEDVSGMEITH-----SSEDAYLGKDDF 265
           + N+                        RSSE++SG+  TH     S E+A L K DF
Sbjct: 190 VTNQRSAETSTLPKGNRDSSGRADGAVLRSSEELSGIGFTHPTFSQSLEEADLRKGDF 247


Top