BLASTX nr result

ID: Rehmannia31_contig00029487 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00029487
         (485 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN15504.1| hypothetical protein CDL12_11858 [Handroanthus im...    69   2e-10
ref|XP_011090831.1| pentatricopeptide repeat-containing protein ...    69   2e-10
ref|XP_012827854.1| PREDICTED: pentatricopeptide repeat-containi...    65   2e-09
gb|EYU43850.1| hypothetical protein MIMGU_mgv1a018606mg, partial...    60   2e-07

>gb|PIN15504.1| hypothetical protein CDL12_11858 [Handroanthus impetiginosus]
          Length = 639

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 34/49 (69%), Positives = 41/49 (83%)
 Frame = -1

Query: 485 DRFDDALYVLGSMLNMGFVLGESICHSLVDKLCRDNSHHHMGTSLEKIL 339
           DR+DDAL+VLG ML MG++LGE I HSLVDKLCRD+S  H+ TSL +IL
Sbjct: 589 DRYDDALFVLGHMLKMGYLLGECISHSLVDKLCRDSS-RHVETSLGEIL 636


>ref|XP_011090831.1| pentatricopeptide repeat-containing protein At5g18950 [Sesamum
           indicum]
          Length = 640

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 35/52 (67%), Positives = 40/52 (76%)
 Frame = -1

Query: 485 DRFDDALYVLGSMLNMGFVLGESICHSLVDKLCRDNSHHHMGTSLEKILEKR 330
           DR DDAL+VLG  L MG VL +S CHSLVDKLCR+NS HH  T L +ILE+R
Sbjct: 590 DRSDDALFVLGYTLKMGIVLKQSSCHSLVDKLCRNNS-HHTNTLLGEILERR 640


>ref|XP_012827854.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18950
           [Erythranthe guttata]
          Length = 680

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 34/52 (65%), Positives = 41/52 (78%)
 Frame = -1

Query: 485 DRFDDALYVLGSMLNMGFVLGESICHSLVDKLCRDNSHHHMGTSLEKILEKR 330
           + FDDAL+VL  ML MGFVL ESIC SLV+KLCRDN  H +  SL++ILE+R
Sbjct: 630 EMFDDALFVLEHMLKMGFVLRESICFSLVEKLCRDNP-HLVRKSLDEILERR 680


>gb|EYU43850.1| hypothetical protein MIMGU_mgv1a018606mg, partial [Erythranthe
           guttata]
          Length = 377

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/38 (73%), Positives = 31/38 (81%)
 Frame = -1

Query: 485 DRFDDALYVLGSMLNMGFVLGESICHSLVDKLCRDNSH 372
           + FDDAL+VL  ML MGFVL ESIC SLV+KLCRDN H
Sbjct: 339 EMFDDALFVLEHMLKMGFVLRESICFSLVEKLCRDNPH 376


Top