BLASTX nr result

ID: Rehmannia31_contig00029255 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00029255
         (495 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012830423.1| PREDICTED: F-box protein At5g03970-like [Ery...    63   4e-15
ref|XP_022890925.1| F-box protein At5g03970-like [Olea europaea ...    45   4e-06
gb|EYU23807.1| hypothetical protein MIMGU_mgv1a025236mg [Erythra...    56   5e-06

>ref|XP_012830423.1| PREDICTED: F-box protein At5g03970-like [Erythranthe guttata]
 gb|EYU43132.1| hypothetical protein MIMGU_mgv1a021348mg [Erythranthe guttata]
          Length = 408

 Score = 62.8 bits (151), Expect(2) = 4e-15
 Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
 Frame = -2

Query: 257 RQKKISLASFIP-WNPLVAVLRQGPRVFLYNLETKSIQWLKFHGRLQYYGCDREPVCPYI 81
           R  +I L  F+P W PLV VLRQ  ++FLYNL + S++W+ ++G    +    E +CPYI
Sbjct: 339 RMDRIRLECFVPNWYPLVLVLRQAEKIFLYNLGSNSVEWVSYYGCPYNHLVHEEYLCPYI 398

Query: 80  KPCFLSSY 57
           +   LSSY
Sbjct: 399 ESSCLSSY 406



 Score = 45.8 bits (107), Expect(2) = 4e-15
 Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
 Frame = -1

Query: 492 VSRTITRSPVDDALWYGFITKDNLQFFRL--NGYNRXXXXXXXXTIPGTEWVLMHSVSID 319
           VSR ITRS VD+ LW+G I  D +Q ++L     +         TIP  EW L+H + I+
Sbjct: 265 VSRAITRSSVDNTLWFGTINPDKIQIYKLPKGEKDGRMSYKRKKTIPCHEWELVHDIDIE 324

Query: 318 WLRKEAGVPPGVQVERKDPRKTK 250
            L        GV     DP K +
Sbjct: 325 SL--------GVFFHVPDPEKNR 339


>ref|XP_022890925.1| F-box protein At5g03970-like [Olea europaea var. sylvestris]
          Length = 387

 Score = 44.7 bits (104), Expect(2) = 4e-06
 Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
 Frame = -2

Query: 230 FIPWNPLVAVLRQGPRVFLYNLETKSIQWLKFHGR--LQYYGCDREPVC-PYIKPCFLSS 60
           F  WNPL+ + R G  VF+YN+ +KS++ L + G+  + Y G   E +  P+ +  FLSS
Sbjct: 327 FSSWNPLIVLFRIGETVFVYNIPSKSVELLSYRGKPPIDYGG---EYIWHPHFETHFLSS 383

Query: 59  YCL 51
           Y L
Sbjct: 384 YSL 386



 Score = 33.5 bits (75), Expect(2) = 4e-06
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
 Frame = -1

Query: 462 DDALWYGFITKDNLQFFRL----NGYNRXXXXXXXXTIPGTEWVLMHSVSIDWL 313
           D  LW G +T+ NL+ + L     GY R         IP  EWVL+H V+ + L
Sbjct: 254 DGLLWCGILTEFNLRIWMLPKSDQGYKRSCT------IPKEEWVLVHGVTFESL 301


>gb|EYU23807.1| hypothetical protein MIMGU_mgv1a025236mg [Erythranthe guttata]
          Length = 368

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
 Frame = -2

Query: 257 RQKKISLASFIP-WNPLVAVLRQGPRVFLYNLETKSIQWLKFHGRLQYYGCDREPVCPYI 81
           R  +I L  F+P W PLV VLRQ   +FLYNL +  ++ ++++G    +    E +CPY+
Sbjct: 294 RMDRIRLECFVPNWYPLVLVLRQAENIFLYNLGSNMVELVRYYGCAYNHLVHEEYLCPYL 353

Query: 80  KPCFLSSY 57
           +   LSSY
Sbjct: 354 ESSCLSSY 361


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