BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00028946
         (404 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP62479.1| Retrovirus-related Pol polyprotein from transposo...   169   1e-49
ref|XP_017615116.1| PREDICTED: uncharacterized mitochondrial pro...   160   2e-47
emb|CAN78448.1| hypothetical protein VITISV_026811 [Vitis vinifera]   165   2e-46
ref|XP_024032652.1| uncharacterized protein LOC112095202, partia...   157   2e-46
gb|PNX66338.1| retrovirus-related Pol polyprotein from transposo...   159   3e-46
gb|PNX77046.1| retrovirus-related Pol polyprotein from transposo...   166   3e-46
ref|XP_023751330.1| uncharacterized protein LOC111899706 [Lactuc...   155   4e-46
gb|PNX58687.1| retrovirus-related Pol polyprotein from transposo...   156   5e-46
gb|KYP42260.1| Retrovirus-related Pol polyprotein from transposo...   166   7e-46
gb|KYP68421.1| Retrovirus-related Pol polyprotein from transposo...   155   1e-45
gb|KYP68418.1| Retrovirus-related Pol polyprotein from transposo...   158   1e-45
ref|XP_020211641.1| uncharacterized protein LOC109796376 [Cajanu...   155   2e-45
gb|PNX93512.1| histone deacetylase, partial [Trifolium pratense]      167   2e-45
gb|PNX89511.1| retrovirus-related Pol polyprotein from transposo...   161   4e-45
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   166   4e-45
ref|XP_016752343.1| PREDICTED: uncharacterized protein LOC107960...   166   4e-45
ref|XP_016747811.1| PREDICTED: uncharacterized mitochondrial pro...   153   5e-45
gb|PNY12955.1| retrovirus-related Pol polyprotein from transposo...   162   6e-45
gb|KYP59934.1| Retrovirus-related Pol polyprotein from transposo...   153   7e-45
gb|PNX84939.1| retrovirus-related Pol polyprotein from transposo...   162   7e-45

>gb|KYP62479.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 293

 Score =  169 bits (428), Expect = 1e-49
 Identities = 78/132 (59%), Positives = 104/132 (78%)
 Frame = -1

Query: 398 LKPRVFSTLMQNIIEPCSLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCK 219
           ++P++  TL+    EP SL++AL S  WKTAM  EY+AL+KN+TWTLVPLP+++ +VGCK
Sbjct: 10  VRPKLHPTLLLTTTEPTSLKQALSSPSWKTAMSLEYDALIKNQTWTLVPLPSNRTVVGCK 69

Query: 218 WVYKIKKHADGSFARCKARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKI 39
           WVY+IK++ DG+  + KARLVAKG+ Q  G DY ETFSPV+K +TIRV+ +L VT  W I
Sbjct: 70  WVYRIKENQDGTINKYKARLVAKGFHQKFGCDYSETFSPVIKPITIRVILTLDVTYHWPI 129

Query: 38  KQLDVNNAFLNG 3
           KQ+D+NNAFLNG
Sbjct: 130 KQVDINNAFLNG 141


>ref|XP_017615116.1| PREDICTED: uncharacterized mitochondrial protein AtMg00820-like
           [Gossypium arboreum]
          Length = 179

 Score =  160 bits (404), Expect = 2e-47
 Identities = 72/131 (54%), Positives = 99/131 (75%)
 Frame = -1

Query: 395 KPRVFSTLMQNIIEPCSLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKW 216
           KP++FS  +  + EP + ++AL SKEW  A + EY AL+KN+TW LVPLP ++R VG KW
Sbjct: 28  KPKLFSAELSEV-EPTTTEDALASKEWALAAQQEYEALLKNETWDLVPLPPNRRAVGFKW 86

Query: 215 VYKIKKHADGSFARCKARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIK 36
           ++K+K+HADG+ AR K+ LV KGY Q  G D+ +TFSP+VK  +IRVV +L V  GW+I+
Sbjct: 87  IFKLKRHADGTIARYKSHLVVKGYLQEAGIDFQDTFSPIVKPTSIRVVLALAVQSGWQIR 146

Query: 35  QLDVNNAFLNG 3
           Q+D+NNAFLNG
Sbjct: 147 QMDINNAFLNG 157


>emb|CAN78448.1| hypothetical protein VITISV_026811 [Vitis vinifera]
          Length = 447

 Score =  165 bits (417), Expect = 2e-46
 Identities = 77/131 (58%), Positives = 100/131 (76%)
 Frame = -1

Query: 395 KPRVFSTLMQNIIEPCSLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKW 216
           KP+V+ T+  N+ EP + QEA+   +WK AM  E+ ALMKNKTW+LV  P ++  VGCKW
Sbjct: 11  KPKVY-TVDLNVEEPNTFQEAISHPKWKEAMNEEFRALMKNKTWSLVSFPTNRTSVGCKW 69

Query: 215 VYKIKKHADGSFARCKARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIK 36
           V+K+K++ DGS +R KARLVAK Y+Q PGFD+ ETFSP+VK  TIRVV ++ V+  W I+
Sbjct: 70  VFKLKRNLDGSVSRYKARLVAKSYSQVPGFDFYETFSPIVKPTTIRVVLAIAVSQSWSIR 129

Query: 35  QLDVNNAFLNG 3
           QLDVNNAFLNG
Sbjct: 130 QLDVNNAFLNG 140


>ref|XP_024032652.1| uncharacterized protein LOC112095202, partial [Morus notabilis]
          Length = 169

 Score =  157 bits (396), Expect = 2e-46
 Identities = 72/130 (55%), Positives = 94/130 (72%)
 Frame = -1

Query: 395 KPRVFSTLMQNIIEPCSLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKW 216
           KP+ +     +  EP ++QEAL+   W++AM+ EY AL  N TWTLV  P D+ +VGC+W
Sbjct: 5   KPKAYIATDLSSSEPATVQEALNCDNWRSAMDAEYQALQNNGTWTLVDRPMDRNVVGCRW 64

Query: 215 VYKIKKHADGSFARCKARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIK 36
            YKIKK+ +G  AR KARLVAKG++Q  GFD+ ETFSPVVK VTIR+V ++ +  GW + 
Sbjct: 65  AYKIKKNCNGLVARYKARLVAKGFSQAVGFDFSETFSPVVKPVTIRIVLTIALACGWSLM 124

Query: 35  QLDVNNAFLN 6
           QLDVNNAFLN
Sbjct: 125 QLDVNNAFLN 134


>gb|PNX66338.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 258

 Score =  159 bits (403), Expect = 3e-46
 Identities = 71/133 (53%), Positives = 97/133 (72%)
 Frame = -1

Query: 401 HLKPRVFSTLMQNIIEPCSLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGC 222
           +LKP+ F       IEP +++ AL    W  AM+ EY AL  N TW+LVPLP  K+ +GC
Sbjct: 9   NLKPKTFLAS----IEPTNIKNALADPHWLKAMQAEYKALQDNNTWSLVPLPPHKKAIGC 64

Query: 221 KWVYKIKKHADGSFARCKARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWK 42
           KW++++K++ DGS  + KARLVAKG+ QTPGFD+ ETFSPV+K VTIR++ +L VT  W 
Sbjct: 65  KWIFRVKENPDGSINKYKARLVAKGFHQTPGFDFTETFSPVIKPVTIRIILTLAVTYKWS 124

Query: 41  IKQLDVNNAFLNG 3
           ++Q+D+NNAFLNG
Sbjct: 125 VQQIDINNAFLNG 137


>gb|PNX77046.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 515

 Score =  166 bits (419), Expect = 3e-46
 Identities = 73/133 (54%), Positives = 101/133 (75%)
 Frame = -1

Query: 401 HLKPRVFSTLMQNIIEPCSLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGC 222
           HLKP+ F+T    I EP +++ AL   +W  AM+TE+ AL  N TW+LVPLP  K+ +GC
Sbjct: 82  HLKPKAFTT----IFEPTTVKSALADPQWLQAMQTEFKALTDNNTWSLVPLPPHKKAIGC 137

Query: 221 KWVYKIKKHADGSFARCKARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWK 42
           KW+++IK++ DG+  + KARLVAKG+ QTPGFD+ ETFSPV+K VTIR++ +L VT  W 
Sbjct: 138 KWIFRIKENPDGTINKYKARLVAKGFLQTPGFDFTETFSPVIKPVTIRIILTLAVTYKWP 197

Query: 41  IKQLDVNNAFLNG 3
           ++Q+D+NNAFLNG
Sbjct: 198 VQQIDINNAFLNG 210


>ref|XP_023751330.1| uncharacterized protein LOC111899706 [Lactuca sativa]
          Length = 154

 Score =  155 bits (393), Expect = 4e-46
 Identities = 69/134 (51%), Positives = 99/134 (73%), Gaps = 2/134 (1%)
 Frame = -1

Query: 398 LKPRVFSTLMQN--IIEPCSLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVG 225
           LKPR+F T + +   +EP    +A+    W+ AM+TEY+ALM+N TW++V  P ++ ++G
Sbjct: 10  LKPRLFHTSLSDPSTVEPRLFSQAIKIPCWQQAMQTEYDALMRNNTWSIVSCPTNENVIG 69

Query: 224 CKWVYKIKKHADGSFARCKARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGW 45
           CKW+Y+IK+ +DG+  R KARLVA+G+TQ    DY ETFSPV+K  TIR+V S+ ++ GW
Sbjct: 70  CKWIYRIKRRSDGTIERHKARLVAQGFTQEASVDYFETFSPVIKPTTIRLVLSIAISRGW 129

Query: 44  KIKQLDVNNAFLNG 3
            I+QLD+NNAFLNG
Sbjct: 130 SIRQLDINNAFLNG 143


>gb|PNX58687.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 181

 Score =  156 bits (395), Expect = 5e-46
 Identities = 69/133 (51%), Positives = 99/133 (74%)
 Frame = -1

Query: 401 HLKPRVFSTLMQNIIEPCSLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGC 222
           +LKP+ F+     ++EP +++ AL   +W  AM TE+ AL  N TW+LVPLP  K+ +GC
Sbjct: 42  NLKPKAFTA----VLEPTTVKSALADPKWLQAMHTEFKALTDNNTWSLVPLPPHKKAIGC 97

Query: 221 KWVYKIKKHADGSFARCKARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWK 42
           KW+++IK++ DG+  + KARLVAKG+ QTP FD+ ETFSPV+K VTIR++ +L VT  W 
Sbjct: 98  KWIFRIKENPDGTINKYKARLVAKGFLQTPDFDFTETFSPVIKPVTIRIILTLAVTHKWV 157

Query: 41  IKQLDVNNAFLNG 3
           ++Q+D+NNAFLNG
Sbjct: 158 VQQIDINNAFLNG 170


>gb|KYP42260.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 623

 Score =  166 bits (421), Expect = 7e-46
 Identities = 77/132 (58%), Positives = 102/132 (77%)
 Frame = -1

Query: 398 LKPRVFSTLMQNIIEPCSLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCK 219
           ++P++  TL+    EP SL++AL S  WKT M  EY+AL+KN+TW LVPLP+++ L+GCK
Sbjct: 454 VRPKLHPTLLLTTTEPTSLKQALSSPSWKTVMSLEYDALIKNQTWKLVPLPSNRTLIGCK 513

Query: 218 WVYKIKKHADGSFARCKARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKI 39
           WVY IK++ DG+  + KARLVAKG+ Q  G DY ETFSPV+K +TIRV+ +LVVT  W I
Sbjct: 514 WVYCIKENHDGTINKYKARLVAKGFHQKFGSDYSETFSPVIKPITIRVILTLVVTYHWPI 573

Query: 38  KQLDVNNAFLNG 3
           KQ+D+NNAFLNG
Sbjct: 574 KQVDINNAFLNG 585


>gb|KYP68421.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 190

 Score =  155 bits (393), Expect = 1e-45
 Identities = 69/132 (52%), Positives = 100/132 (75%)
 Frame = -1

Query: 398 LKPRVFSTLMQNIIEPCSLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCK 219
           +KPR+  TL+   +EP ++++AL +  W  AM+TEYNAL+ N TW+LVPLP  +  +GCK
Sbjct: 10  VKPRLQPTLLLTHVEPKTIKQALSNPTWSAAMQTEYNALVHNNTWSLVPLPPHRTTIGCK 69

Query: 218 WVYKIKKHADGSFARCKARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKI 39
           WV+++K++ +G+  + KARLVAKG+ Q  GFD  ETFSPV+K +T+R++ +L +T  W I
Sbjct: 70  WVFRVKENPNGTIQKYKARLVAKGFNQQFGFDCHETFSPVIKPITVRLILTLALTHRWPI 129

Query: 38  KQLDVNNAFLNG 3
           +QLDVNNAFLNG
Sbjct: 130 QQLDVNNAFLNG 141


>gb|KYP68418.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 269

 Score =  158 bits (399), Expect = 1e-45
 Identities = 71/132 (53%), Positives = 100/132 (75%)
 Frame = -1

Query: 398 LKPRVFSTLMQNIIEPCSLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCK 219
           +KPR+  TL+   +EP + ++AL +  W  AM+TEYNAL+ N TW+LVPLP  +  +GCK
Sbjct: 10  VKPRLQPTLLLTHVEPKTTKQALSNPTWSAAMQTEYNALLHNDTWSLVPLPPHRTAIGCK 69

Query: 218 WVYKIKKHADGSFARCKARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKI 39
           WV+++K++ +G+  + KARLVAKG+ Q  GFDY ETFSPV+K VT+R++ +L +T  W I
Sbjct: 70  WVFRVKENPNGTVQKYKARLVAKGFNQQFGFDYHETFSPVIKPVTVRLILTLALTHRWPI 129

Query: 38  KQLDVNNAFLNG 3
           +QLDVNNAFLNG
Sbjct: 130 QQLDVNNAFLNG 141


>ref|XP_020211641.1| uncharacterized protein LOC109796376 [Cajanus cajan]
          Length = 193

 Score =  155 bits (392), Expect = 2e-45
 Identities = 71/130 (54%), Positives = 97/130 (74%)
 Frame = -1

Query: 392 PRVFSTLMQNIIEPCSLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKWV 213
           PR+  +L     EP ++++AL    W +AM+ EYNALM N TW LV LP+D++ VGCKWV
Sbjct: 12  PRIHPSLFLAHSEPKTVKQALADPNWFSAMQQEYNALMLNHTWDLVSLPSDRKAVGCKWV 71

Query: 212 YKIKKHADGSFARCKARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIKQ 33
           +++K++ADGS  + KARLVAKG+ Q  GFD+ ETFSPV+K +TIR++ +L +T  W + Q
Sbjct: 72  FRVKENADGSIDKLKARLVAKGFHQVHGFDFHETFSPVIKPITIRIILTLALTNNWNLFQ 131

Query: 32  LDVNNAFLNG 3
           LDVNNAFLNG
Sbjct: 132 LDVNNAFLNG 141


>gb|PNX93512.1| histone deacetylase, partial [Trifolium pratense]
          Length = 1418

 Score =  167 bits (423), Expect = 2e-45
 Identities = 73/133 (54%), Positives = 102/133 (76%)
 Frame = -1

Query: 401  HLKPRVFSTLMQNIIEPCSLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGC 222
            HLKP+ F+      IEP +++ AL S +W  AM++EY ALM N TW+LVPLP  K+ +GC
Sbjct: 907  HLKPKTFTAS----IEPTTIKSALASPQWLQAMKSEYKALMDNNTWSLVPLPPHKKAIGC 962

Query: 221  KWVYKIKKHADGSFARCKARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWK 42
            KW++++K++ DGS  + KARLVAKG+ QTPGFD+ ETFSPV+K VT+R++ +L VT  W 
Sbjct: 963  KWIFRVKENPDGSVNKYKARLVAKGFLQTPGFDFTETFSPVIKPVTVRIILTLAVTYRWS 1022

Query: 41   IKQLDVNNAFLNG 3
            ++Q+D+NNAFLNG
Sbjct: 1023 VQQIDINNAFLNG 1035


>gb|PNX89511.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 430

 Score =  161 bits (407), Expect = 4e-45
 Identities = 71/133 (53%), Positives = 101/133 (75%)
 Frame = -1

Query: 401 HLKPRVFSTLMQNIIEPCSLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGC 222
           +LKP+ F+T    ++EP +++ AL   +W  AM TE+ AL  N TW+LVPLP  K+ +GC
Sbjct: 225 NLKPKAFTT----VLEPTTVKSALADPKWLQAMHTEFKALTDNNTWSLVPLPPHKKAIGC 280

Query: 221 KWVYKIKKHADGSFARCKARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWK 42
           KW+++IK++ DG+  + KARLVAKG+ QTPGFD+ ETFSPV+K VTIR++ +L VT  W 
Sbjct: 281 KWIFRIKENPDGTINKYKARLVAKGFLQTPGFDFTETFSPVIKPVTIRIILTLAVTHKWV 340

Query: 41  IKQLDVNNAFLNG 3
           ++Q+D+NNAFLNG
Sbjct: 341 VQQIDINNAFLNG 353


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  166 bits (421), Expect = 4e-45
 Identities = 79/131 (60%), Positives = 102/131 (77%)
 Frame = -1

Query: 395  KPRVFSTLMQNIIEPCSLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKW 216
            KP V+ T+  N+ EP + QEA+   +WK AM+ E+ ALMKNKTW+LV LP ++  VGC+W
Sbjct: 734  KPXVY-TVDLNVEEPNTFQEAISHPKWKEAMDEEFRALMKNKTWSLVSLPTNRTSVGCRW 792

Query: 215  VYKIKKHADGSFARCKARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIK 36
            V+K+K++ DGS +R KARLVAKGY+Q PGFD+ ETFSPVVK  TIRVV ++ V+  W I+
Sbjct: 793  VFKLKRNPDGSVSRYKARLVAKGYSQVPGFDFYETFSPVVKPTTIRVVLAIAVSQSWCIR 852

Query: 35   QLDVNNAFLNG 3
            QLDVNNAFLNG
Sbjct: 853  QLDVNNAFLNG 863


>ref|XP_016752343.1| PREDICTED: uncharacterized protein LOC107960516 [Gossypium hirsutum]
          Length = 848

 Score =  166 bits (420), Expect = 4e-45
 Identities = 76/131 (58%), Positives = 99/131 (75%)
 Frame = -1

Query: 395  KPRVFSTLMQNIIEPCSLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKW 216
            KPR+FS  + +  EP  + EA  SKEW  A + EY+ALMKN TW LVPLPA++R VGCKW
Sbjct: 716  KPRLFSAELHDT-EPAIIAEAFSSKEWTLAAQQEYDALMKNNTWDLVPLPANRRAVGCKW 774

Query: 215  VYKIKKHADGSFARCKARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIK 36
            ++K+K+ +DGS A+ K RLV KGY Q  G D+ ETFSPVVK +TIRVV +L +  GW+++
Sbjct: 775  IFKLKRRSDGSIAQYKGRLVVKGYLQEAGIDFHETFSPVVKPITIRVVLALAMKFGWQLR 834

Query: 35   QLDVNNAFLNG 3
            Q+D+NNAFLNG
Sbjct: 835  QIDINNAFLNG 845


>ref|XP_016747811.1| PREDICTED: uncharacterized mitochondrial protein AtMg00820-like
           [Gossypium hirsutum]
          Length = 167

 Score =  153 bits (387), Expect = 5e-45
 Identities = 70/131 (53%), Positives = 93/131 (70%)
 Frame = -1

Query: 395 KPRVFSTLMQNIIEPCSLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCKW 216
           KPR+F++++    EP S+ EA  S  W  A  TEY AL+ N TW LVPLP  ++ VGCKW
Sbjct: 11  KPRLFTSVL-TAYEPISIVEAFQSPAWTAAAHTEYTALLANHTWDLVPLPVGRKAVGCKW 69

Query: 215 VYKIKKHADGSFARCKARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKIK 36
           ++KIK++ADGS AR K RLV KGY Q  G D+   FSPVVK  T+R+V +L V++GW + 
Sbjct: 70  IFKIKRNADGSVARYKGRLVVKGYLQETGVDFRNIFSPVVKPTTVRLVLALAVSMGWSLH 129

Query: 35  QLDVNNAFLNG 3
           ++D+NNAFLNG
Sbjct: 130 RVDINNAFLNG 140


>gb|PNY12955.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 535

 Score =  162 bits (411), Expect = 6e-45
 Identities = 72/133 (54%), Positives = 102/133 (76%)
 Frame = -1

Query: 401 HLKPRVFSTLMQNIIEPCSLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGC 222
           +LKP+VF+  +    EP +++ AL   +W  AM+ EY ALM N TW+LVPLP  K+ +GC
Sbjct: 9   NLKPKVFTVSL----EPTTIKAALTDPKWLHAMQNEYKALMDNNTWSLVPLPPHKKAIGC 64

Query: 221 KWVYKIKKHADGSFARCKARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWK 42
           KW++++K+++DG+  + KARLVAKG+ QTPGFD+ ETFSPV+K +TIRV+ +L VT  W 
Sbjct: 65  KWIFRVKENSDGTVNKFKARLVAKGFLQTPGFDFTETFSPVIKPITIRVILTLAVTYKWP 124

Query: 41  IKQLDVNNAFLNG 3
           ++Q+DVNNAFLNG
Sbjct: 125 VQQIDVNNAFLNG 137


>gb|KYP59934.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 165

 Score =  153 bits (386), Expect = 7e-45
 Identities = 75/131 (57%), Positives = 97/131 (74%)
 Frame = -1

Query: 398 LKPRVFSTLMQNIIEPCSLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGCK 219
           +KPR+  TL+   IEP + ++AL S  W  AM+ EYNAL+ N TWTLV LP +K  +GCK
Sbjct: 10  VKPRLQPTLLLTHIEPKNTKQALASDTWLAAMKQEYNALLNNGTWTLVSLPPNKTAIGCK 69

Query: 218 WVYKIKKHADGSFARCKARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWKI 39
           WV++IK++ DG+  + KARLVAKG+ Q  G DY ETFSPVVK VTIR++ +L +T  W I
Sbjct: 70  WVFRIKENLDGTVNKYKARLVAKGFHQQFGSDYNETFSPVVKPVTIRLILTLALTHHWSI 129

Query: 38  KQLDVNNAFLN 6
           +QLDVNNAFLN
Sbjct: 130 QQLDVNNAFLN 140


>gb|PNX84939.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 499

 Score =  162 bits (409), Expect = 7e-45
 Identities = 72/133 (54%), Positives = 100/133 (75%)
 Frame = -1

Query: 401 HLKPRVFSTLMQNIIEPCSLQEALHSKEWKTAMETEYNALMKNKTWTLVPLPADKRLVGC 222
           HLK + F+T    I EP +++ AL   +W  AM+TE+ AL  N TW+LVPLP  K+ +GC
Sbjct: 66  HLKLKAFTT----IFEPTTVKSALADPQWLQAMQTEFKALTDNNTWSLVPLPPHKKAIGC 121

Query: 221 KWVYKIKKHADGSFARCKARLVAKGYTQTPGFDYLETFSPVVKQVTIRVVFSLVVTLGWK 42
           KW+++IK++ DG+  + KARLVAKG+ QTPGFD+ ETFSPV+K VTIR++ +L VT  W 
Sbjct: 122 KWIFRIKENPDGTINKYKARLVAKGFLQTPGFDFTETFSPVIKPVTIRIILTLAVTYKWP 181

Query: 41  IKQLDVNNAFLNG 3
           ++Q+D+NNAFLNG
Sbjct: 182 VQQIDINNAFLNG 194