BLASTX nr result

ID: Rehmannia31_contig00028916 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00028916
         (388 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011095259.1| cytochrome c-type biogenesis ccda-like chlor...    92   2e-19
gb|PIM98174.1| hypothetical protein CDL12_29345 [Handroanthus im...    78   2e-14
ref|XP_012827582.1| PREDICTED: cytochrome c-type biogenesis ccda...    63   7e-09

>ref|XP_011095259.1| cytochrome c-type biogenesis ccda-like chloroplastic protein
           [Sesamum indicum]
          Length = 358

 Score = 91.7 bits (226), Expect = 2e-19
 Identities = 49/112 (43%), Positives = 62/112 (55%)
 Frame = +3

Query: 51  MKLALINSCGNNFSCCRPIPVSSFKRIPTKFHGSHDKEQTTVLKRDPANGEXXXXXXXXX 230
           MKLALINSC +NFSCCR IP SS +R+P+  +G++DKEQ   LK +P NG+         
Sbjct: 1   MKLALINSCSSNFSCCRQIPSSSSRRLPSAVYGNYDKEQPRFLKLEPVNGQ-NVDKLPSK 59

Query: 231 XXXXXXTGAITNSFXXXXXXXXXXXXXXXMETITEIPGSLHTLAEGSNGEWL 386
                   A  NS                ME +TE  GSL+TLA+GS G+WL
Sbjct: 60  SSKLDLASAFINSAAVAGLVTTPMANALTMENMTETTGSLYTLADGSTGDWL 111


>gb|PIM98174.1| hypothetical protein CDL12_29345 [Handroanthus impetiginosus]
          Length = 354

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 47/112 (41%), Positives = 60/112 (53%)
 Frame = +3

Query: 51  MKLALINSCGNNFSCCRPIPVSSFKRIPTKFHGSHDKEQTTVLKRDPANGEXXXXXXXXX 230
           M LAL+NSCG+NFS CRPIPVSSF+ + T+ + ++D+EQ   L   P NGE         
Sbjct: 1   MNLALVNSCGSNFSGCRPIPVSSFRHLSTRIYSNYDREQPNFL---PVNGE-KNDMSLPK 56

Query: 231 XXXXXXTGAITNSFXXXXXXXXXXXXXXXMETITEIPGSLHTLAEGSNGEWL 386
                   A  NS                ME+I E  GSL+TLA+GSN +WL
Sbjct: 57  TNKTDVAKAFINSVAASGLVATPMANALTMESIEETRGSLYTLADGSN-DWL 107


>ref|XP_012827582.1| PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic
           protein 1 [Erythranthe guttata]
 gb|EYU19159.1| hypothetical protein MIMGU_mgv1a009060mg [Erythranthe guttata]
          Length = 354

 Score = 62.8 bits (151), Expect = 7e-09
 Identities = 41/113 (36%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
 Frame = +3

Query: 51  MKLALINSCGNNFSCCRPIPVSSFKRIPTK-FHGSHDKEQTTVLKRDPANGEXXXXXXXX 227
           M+++L+NS  NN      IP+SSF   PT     ++DKE++  LKR P N E        
Sbjct: 1   MRISLLNSISNNLRISPSIPLSSFNHRPTTTVRCNYDKEESQFLKRAPVNEENIRTSRVD 60

Query: 228 XXXXXXXTGAITNSFXXXXXXXXXXXXXXXMETITEIPGSLHTLAEGSNGEWL 386
                  T A  +S                ME ITE  GSL+TLAEG+ G+WL
Sbjct: 61  F------TTAFISSVAAATLVATPIANALDMEKITEATGSLYTLAEGNTGDWL 107


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