BLASTX nr result

ID: Rehmannia31_contig00028260 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00028260
         (548 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011098946.1| histone H2A.Z-specific chaperone CHZ1 [Sesam...    84   2e-17
gb|PIN24214.1| hypothetical protein CDL12_03035 [Handroanthus im...    70   1e-11

>ref|XP_011098946.1| histone H2A.Z-specific chaperone CHZ1 [Sesamum indicum]
 ref|XP_011098947.1| histone H2A.Z-specific chaperone CHZ1 [Sesamum indicum]
 ref|XP_011098948.1| histone H2A.Z-specific chaperone CHZ1 [Sesamum indicum]
 ref|XP_011098950.1| histone H2A.Z-specific chaperone CHZ1 [Sesamum indicum]
 ref|XP_011098951.1| histone H2A.Z-specific chaperone CHZ1 [Sesamum indicum]
 ref|XP_011098952.1| histone H2A.Z-specific chaperone CHZ1 [Sesamum indicum]
 ref|XP_011098953.1| histone H2A.Z-specific chaperone CHZ1 [Sesamum indicum]
 ref|XP_020554661.1| histone H2A.Z-specific chaperone CHZ1 [Sesamum indicum]
 ref|XP_020554662.1| histone H2A.Z-specific chaperone CHZ1 [Sesamum indicum]
 ref|XP_020554663.1| histone H2A.Z-specific chaperone CHZ1 [Sesamum indicum]
 ref|XP_020554664.1| histone H2A.Z-specific chaperone CHZ1 [Sesamum indicum]
          Length = 149

 Score = 84.3 bits (207), Expect = 2e-17
 Identities = 43/68 (63%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
 Frame = -3

Query: 210 MAEMRKVEETCAFPNKHKPDLPNPINETLEQKED-AEDDGSDSNKRQKLEISTENEKNIV 34
           MA+MR +EE  AFP K K DLPNPI++TLE+KE+  E+D SDSNKRQKLE   ENE +I+
Sbjct: 1   MADMRNIEEGSAFPEKRKLDLPNPIDKTLEEKEEIKEEDKSDSNKRQKLETPMENENSII 60

Query: 33  CSFSVAEK 10
            SF+V EK
Sbjct: 61  RSFTVDEK 68


>gb|PIN24214.1| hypothetical protein CDL12_03035 [Handroanthus impetiginosus]
          Length = 163

 Score = 69.7 bits (169), Expect = 1e-11
 Identities = 41/69 (59%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
 Frame = -3

Query: 210 MAEMRKVEETCAFPNKHKPDLPNPINETLEQ--KEDAEDDGSDSNKRQKLEISTENEKNI 37
           MAEMRK EE  AFP K K D PN IN+ LE+  +E  E+D  DS KRQKLEI  ENEK I
Sbjct: 1   MAEMRKAEEGSAFPEKRKLDQPNSINKALEEEMEEIKEEDEFDSKKRQKLEIPAENEKYI 60

Query: 36  VCSFSVAEK 10
           +   +VAEK
Sbjct: 61  I---TVAEK 66


Top