BLASTX nr result

ID: Rehmannia31_contig00027816 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00027816
         (888 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP17417.1| unnamed protein product [Coffea canephora]             69   5e-10
gb|AGC78848.1| hypothetical protein (mitochondrion) [Vicia faba]       57   8e-06

>emb|CDP17417.1| unnamed protein product [Coffea canephora]
          Length = 232

 Score = 68.9 bits (167), Expect = 5e-10
 Identities = 35/68 (51%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
 Frame = -1

Query: 885 FFCIARVICLLILSKVAFALGLLFMDELSQAVAPFLPSSSS--AGGLNQPPAPSGD-SVF 715
           FF IA+V C+ +LSK AFALG LFMD+LS+A++ F PS+S   +GG + PP PSG   + 
Sbjct: 43  FFIIAQVFCVFVLSKFAFALGYLFMDDLSRAISQFDPSASGGMSGGSSTPPGPSGHFGIL 102

Query: 714 FPISQSDE 691
            P   +DE
Sbjct: 103 LPFGSTDE 110


>gb|AGC78848.1| hypothetical protein (mitochondrion) [Vicia faba]
          Length = 245

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
 Frame = -1

Query: 888 LFFCIARVICLLILSKVAFALGLLFMDELSQAVAPFLPSSSS--AGGLNQPPAPSGDSVF 715
           L + +   +  L+LS+    LG +FM++L++AVA F PSSS   +GG NQPP+P G    
Sbjct: 59  LLYFLTGFLFSLVLSRGIMELGYVFMEDLARAVAQFYPSSSGGMSGGFNQPPSPEGALPA 118

Query: 714 FPISQSDEGEEQPAGTSAASHSLTAEVHSDFLFKERK 604
           F  +Q   G     G   A    ++E+ +    +E K
Sbjct: 119 FHETQDQPGPSASEGEGRAVRDFSSELRNIESLREDK 155


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