BLASTX nr result

ID: Rehmannia31_contig00027645 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00027645
         (392 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011076617.1| putative pentatricopeptide repeat-containing...   127   2e-31
ref|XP_012858562.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-25
ref|XP_016460770.1| PREDICTED: putative pentatricopeptide repeat...    55   4e-06
ref|XP_009624329.1| PREDICTED: putative pentatricopeptide repeat...    55   4e-06
ref|XP_016460763.1| PREDICTED: putative pentatricopeptide repeat...    55   4e-06
ref|XP_009624328.1| PREDICTED: putative pentatricopeptide repeat...    55   4e-06

>ref|XP_011076617.1| putative pentatricopeptide repeat-containing protein At3g47840
           [Sesamum indicum]
 ref|XP_020549219.1| putative pentatricopeptide repeat-containing protein At3g47840
           [Sesamum indicum]
          Length = 771

 Score =  127 bits (319), Expect = 2e-31
 Identities = 64/100 (64%), Positives = 79/100 (79%)
 Frame = -2

Query: 301 MAISFNAEFQFLGCVHDRQLFKPSVPNRKENFLQARKIAATVAFQSIHKRNRVVGSKLFE 122
           MAI+F ++ Q LG VHDR+LFKP V NRKE    A+K +A +AFQSI++R RVVGSKLFE
Sbjct: 1   MAINFPSKLQLLGSVHDRELFKPKVSNRKE----AKKSSAAIAFQSINERTRVVGSKLFE 56

Query: 121 FGATYESSEKDQVQELIDQLHRCAEKRLLTGARVVHGFVL 2
           FGA YE S+K QVQ+L+DQLH CAEK LLT  R +HG++L
Sbjct: 57  FGANYEYSQKAQVQKLVDQLHSCAEKGLLTETREIHGYLL 96


>ref|XP_012858562.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16610-like [Erythranthe guttata]
 ref|XP_012858563.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16610-like [Erythranthe guttata]
          Length = 771

 Score =  110 bits (274), Expect = 2e-25
 Identities = 58/100 (58%), Positives = 71/100 (71%)
 Frame = -2

Query: 301 MAISFNAEFQFLGCVHDRQLFKPSVPNRKENFLQARKIAATVAFQSIHKRNRVVGSKLFE 122
           MAIS +A+F  LG  H R LF+P   NRKE    AR +AA  AFQS+H+R+R+VGSKLF+
Sbjct: 1   MAISCHAKFLSLGSFHSRGLFEPGFSNRKE----ARNLAAAKAFQSVHERSRIVGSKLFQ 56

Query: 121 FGATYESSEKDQVQELIDQLHRCAEKRLLTGARVVHGFVL 2
               YE S+K Q QELIDQLH CA+K LL  A V+HG+VL
Sbjct: 57  VDENYEFSQKAQRQELIDQLHLCAQKELLREASVIHGYVL 96


>ref|XP_016460770.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570 isoform X2 [Nicotiana tabacum]
          Length = 761

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 24/52 (46%), Positives = 36/52 (69%)
 Frame = -2

Query: 157 KRNRVVGSKLFEFGATYESSEKDQVQELIDQLHRCAEKRLLTGARVVHGFVL 2
           + N VV +K+ E   +YE+S K QVQ+L+D LH CAE+ LL   + +HG++L
Sbjct: 35  RNNGVVCNKMLETSVSYEASNKAQVQKLVDLLHVCAEEELLDETKTIHGYIL 86


>ref|XP_009624329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570 isoform X2 [Nicotiana tomentosiformis]
          Length = 761

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 24/52 (46%), Positives = 36/52 (69%)
 Frame = -2

Query: 157 KRNRVVGSKLFEFGATYESSEKDQVQELIDQLHRCAEKRLLTGARVVHGFVL 2
           + N VV +K+ E   +YE+S K QVQ+L+D LH CAE+ LL   + +HG++L
Sbjct: 35  RNNGVVCNKMLETSVSYEASNKAQVQKLVDLLHVCAEEELLDETKTIHGYIL 86


>ref|XP_016460763.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570 isoform X1 [Nicotiana tabacum]
          Length = 786

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 24/52 (46%), Positives = 36/52 (69%)
 Frame = -2

Query: 157 KRNRVVGSKLFEFGATYESSEKDQVQELIDQLHRCAEKRLLTGARVVHGFVL 2
           + N VV +K+ E   +YE+S K QVQ+L+D LH CAE+ LL   + +HG++L
Sbjct: 60  RNNGVVCNKMLETSVSYEASNKAQVQKLVDLLHVCAEEELLDETKTIHGYIL 111


>ref|XP_009624328.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570 isoform X1 [Nicotiana tomentosiformis]
          Length = 786

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 24/52 (46%), Positives = 36/52 (69%)
 Frame = -2

Query: 157 KRNRVVGSKLFEFGATYESSEKDQVQELIDQLHRCAEKRLLTGARVVHGFVL 2
           + N VV +K+ E   +YE+S K QVQ+L+D LH CAE+ LL   + +HG++L
Sbjct: 60  RNNGVVCNKMLETSVSYEASNKAQVQKLVDLLHVCAEEELLDETKTIHGYIL 111


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