BLASTX nr result

ID: Rehmannia31_contig00027513 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00027513
         (399 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011072693.1| pumilio homolog 23 isoform X2 [Sesamum indic...   103   7e-23
ref|XP_011072692.1| pumilio homolog 23 isoform X1 [Sesamum indicum]   103   7e-23
gb|PIN13745.1| putative RNA-binding protein [Handroanthus impeti...    99   3e-21
gb|EYU21269.1| hypothetical protein MIMGU_mgv1a002768mg [Erythra...    84   5e-16
ref|XP_012856533.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homo...    84   5e-16

>ref|XP_011072693.1| pumilio homolog 23 isoform X2 [Sesamum indicum]
 ref|XP_011072694.1| pumilio homolog 23 isoform X2 [Sesamum indicum]
          Length = 748

 Score =  103 bits (256), Expect = 7e-23
 Identities = 55/104 (52%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
 Frame = -1

Query: 396 LSSGFSRNTGSPFLAHQGSTRLKKSGNKQVPDGRRFPKD-DDNFFKSNSKKHKMEKASSS 220
           LS+G+S  +GSPFLAHQGS   KK+GNKQVP+GR FP+D   + F+S SK+HK+EK S S
Sbjct: 645 LSTGYSSKSGSPFLAHQGSGGPKKTGNKQVPEGREFPRDVGYDSFQSKSKRHKVEKTSIS 704

Query: 219 TKNSNDGEILHDEKLSTTKNEXXXXXXXXXXXXXXXXXKAGITD 88
           +KN+NDGE LH +K S+ KNE                 KAGI+D
Sbjct: 705 SKNNNDGETLHGDKSSSIKNEKKRRRKDGLSNSLDKKLKAGISD 748


>ref|XP_011072692.1| pumilio homolog 23 isoform X1 [Sesamum indicum]
          Length = 789

 Score =  103 bits (256), Expect = 7e-23
 Identities = 55/104 (52%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
 Frame = -1

Query: 396 LSSGFSRNTGSPFLAHQGSTRLKKSGNKQVPDGRRFPKD-DDNFFKSNSKKHKMEKASSS 220
           LS+G+S  +GSPFLAHQGS   KK+GNKQVP+GR FP+D   + F+S SK+HK+EK S S
Sbjct: 686 LSTGYSSKSGSPFLAHQGSGGPKKTGNKQVPEGREFPRDVGYDSFQSKSKRHKVEKTSIS 745

Query: 219 TKNSNDGEILHDEKLSTTKNEXXXXXXXXXXXXXXXXXKAGITD 88
           +KN+NDGE LH +K S+ KNE                 KAGI+D
Sbjct: 746 SKNNNDGETLHGDKSSSIKNEKKRRRKDGLSNSLDKKLKAGISD 789


>gb|PIN13745.1| putative RNA-binding protein [Handroanthus impetiginosus]
          Length = 794

 Score = 98.6 bits (244), Expect = 3e-21
 Identities = 57/83 (68%), Positives = 63/83 (75%), Gaps = 2/83 (2%)
 Frame = -1

Query: 399 HLSSGFSRNTGSPFLAHQG-STRLKKSGNKQVPDGRRFPKD-DDNFFKSNSKKHKMEKAS 226
           HLSSGFS N G+PFLAHQG ST+ KKS NKQ P+ R F KD DDN FKS SK+ K EKAS
Sbjct: 691 HLSSGFSSN-GTPFLAHQGRSTKPKKSRNKQSPESRGFHKDVDDNSFKSKSKERKTEKAS 749

Query: 225 SSTKNSNDGEILHDEKLSTTKNE 157
           SSTK +NDGEI+  EKLST   E
Sbjct: 750 SSTKTTNDGEIVLGEKLSTHTTE 772


>gb|EYU21269.1| hypothetical protein MIMGU_mgv1a002768mg [Erythranthe guttata]
          Length = 639

 Score = 83.6 bits (205), Expect = 5e-16
 Identities = 46/80 (57%), Positives = 56/80 (70%)
 Frame = -1

Query: 396 LSSGFSRNTGSPFLAHQGSTRLKKSGNKQVPDGRRFPKDDDNFFKSNSKKHKMEKASSST 217
           L+S F  ++ SPFLAHQG    KKSGNK VP+GR F KDD+N   S SK+HK  K  +ST
Sbjct: 543 LNSAFPSSSVSPFLAHQGKP--KKSGNKHVPEGRGFAKDDENL--SKSKRHKTGKTGNST 598

Query: 216 KNSNDGEILHDEKLSTTKNE 157
           +N+N GEI HDEK ST K +
Sbjct: 599 ENNNGGEI-HDEKSSTVKEK 617


>ref|XP_012856533.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 23 [Erythranthe
           guttata]
          Length = 784

 Score = 83.6 bits (205), Expect = 5e-16
 Identities = 46/80 (57%), Positives = 56/80 (70%)
 Frame = -1

Query: 396 LSSGFSRNTGSPFLAHQGSTRLKKSGNKQVPDGRRFPKDDDNFFKSNSKKHKMEKASSST 217
           L+S F  ++ SPFLAHQG    KKSGNK VP+GR F KDD+N   S SK+HK  K  +ST
Sbjct: 688 LNSAFPSSSVSPFLAHQGKP--KKSGNKHVPEGRGFAKDDENL--SKSKRHKTGKTGNST 743

Query: 216 KNSNDGEILHDEKLSTTKNE 157
           +N+N GEI HDEK ST K +
Sbjct: 744 ENNNGGEI-HDEKSSTVKEK 762


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