BLASTX nr result

ID: Rehmannia31_contig00027458 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00027458
         (392 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN03027.1| hypothetical protein CDL12_24452 [Handroanthus im...    63   3e-09
gb|PLY78006.1| hypothetical protein LSAT_9X40280 [Lactuca sativa]      60   5e-08
ref|XP_023728393.1| protein MKS1-like [Lactuca sativa]                 60   6e-08
ref|XP_011101648.1| protein MKS1 [Sesamum indicum]                     59   1e-07
ref|XP_022886862.1| nuclear speckle RNA-binding protein B-like [...    57   4e-07
gb|KCW69207.1| hypothetical protein EUGRSUZ_F02723 [Eucalyptus g...    56   1e-06
ref|XP_010062140.1| PREDICTED: protein MKS1 [Eucalyptus grandis]       56   1e-06
ref|XP_015078954.1| PREDICTED: protein MKS1-like [Solanum pennel...    54   7e-06

>gb|PIN03027.1| hypothetical protein CDL12_24452 [Handroanthus impetiginosus]
          Length = 234

 Score = 62.8 bits (151), Expect = 3e-09
 Identities = 31/42 (73%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
 Frame = +2

Query: 2   FFHDLSPVLHSNRN--YFENNNFMLQSPSNLISPQINMPSPN 121
           FFHDLSP LHSNRN  Y ENN   LQSPS  ISP IN PSPN
Sbjct: 182 FFHDLSPALHSNRNNNYLENNFNFLQSPSTFISPHINTPSPN 223


>gb|PLY78006.1| hypothetical protein LSAT_9X40280 [Lactuca sativa]
          Length = 237

 Score = 59.7 bits (143), Expect = 5e-08
 Identities = 31/42 (73%), Positives = 34/42 (80%), Gaps = 2/42 (4%)
 Frame = +2

Query: 2   FFHDLSPVLHSNRNY--FENNNFMLQSPSNLISPQINMPSPN 121
           FF DLSPVLHSNRNY   ENNNF++QSPSNL+SP   M SPN
Sbjct: 188 FFPDLSPVLHSNRNYNYLENNNFLMQSPSNLLSPY--MISPN 227


>ref|XP_023728393.1| protein MKS1-like [Lactuca sativa]
          Length = 273

 Score = 59.7 bits (143), Expect = 6e-08
 Identities = 31/42 (73%), Positives = 34/42 (80%), Gaps = 2/42 (4%)
 Frame = +2

Query: 2   FFHDLSPVLHSNRNY--FENNNFMLQSPSNLISPQINMPSPN 121
           FF DLSPVLHSNRNY   ENNNF++QSPSNL+SP   M SPN
Sbjct: 224 FFPDLSPVLHSNRNYNYLENNNFLMQSPSNLLSPY--MISPN 263


>ref|XP_011101648.1| protein MKS1 [Sesamum indicum]
          Length = 243

 Score = 58.5 bits (140), Expect = 1e-07
 Identities = 27/40 (67%), Positives = 31/40 (77%)
 Frame = +2

Query: 2   FFHDLSPVLHSNRNYFENNNFMLQSPSNLISPQINMPSPN 121
           FFHDLSPVLHSNRNY  N + +    + +ISPQINMPSPN
Sbjct: 193 FFHDLSPVLHSNRNYNYNLDILPSPSTFIISPQINMPSPN 232


>ref|XP_022886862.1| nuclear speckle RNA-binding protein B-like [Olea europaea var.
           sylvestris]
          Length = 225

 Score = 57.0 bits (136), Expect = 4e-07
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = +2

Query: 2   FFHDLSPVLHSNRNYFENNNFMLQSPSNLISPQINMPSPN 121
           FFHDLSPVLHSNRNY +++  +L SPSN +SPQI  PSPN
Sbjct: 179 FFHDLSPVLHSNRNYLDSS--LLPSPSNFVSPQI--PSPN 214


>gb|KCW69207.1| hypothetical protein EUGRSUZ_F02723 [Eucalyptus grandis]
          Length = 228

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 23/40 (57%), Positives = 32/40 (80%)
 Frame = +2

Query: 2   FFHDLSPVLHSNRNYFENNNFMLQSPSNLISPQINMPSPN 121
           FFHDLSP L+S +N+F + +F+LQSPS  ISP+I  P+P+
Sbjct: 179 FFHDLSPALYSTKNHFTDGSFLLQSPSPFISPRITSPAPS 218


>ref|XP_010062140.1| PREDICTED: protein MKS1 [Eucalyptus grandis]
          Length = 263

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 23/40 (57%), Positives = 32/40 (80%)
 Frame = +2

Query: 2   FFHDLSPVLHSNRNYFENNNFMLQSPSNLISPQINMPSPN 121
           FFHDLSP L+S +N+F + +F+LQSPS  ISP+I  P+P+
Sbjct: 214 FFHDLSPALYSTKNHFTDGSFLLQSPSPFISPRITSPAPS 253


>ref|XP_015078954.1| PREDICTED: protein MKS1-like [Solanum pennellii]
          Length = 246

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = +2

Query: 2   FFHDLSPVLHSNRNYFENNNFMLQSPSNLISPQI 103
           FFHDLSP LH+NRNYFE+++  L SPSN ISP I
Sbjct: 192 FFHDLSPELHNNRNYFEHSSNYLPSPSNFISPTI 225


Top