BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00027454
         (1483 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PRQ17740.1| putative RNA-directed DNA polymerase [Rosa chinen...   741   0.0  
gb|PRQ52345.1| putative RNA-directed DNA polymerase [Rosa chinen...   722   0.0  
gb|PNX93789.1| copia-type polyprotein [Trifolium pratense]            673   0.0  
gb|KYP38784.1| Retrovirus-related Pol polyprotein from transposo...   630   0.0  
gb|PRQ38021.1| putative RNA-directed DNA polymerase [Rosa chinen...   627   0.0  
emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]   622   0.0  
emb|CBI37296.3| unnamed protein product, partial [Vitis vinifera]     643   0.0  
emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]   634   0.0  
gb|KZV14234.1| hypothetical protein F511_44122 [Dorcoceras hygro...   579   0.0  
gb|KYP42102.1| Retrovirus-related Pol polyprotein from transposo...   577   0.0  
emb|CAB75932.1| putative protein [Arabidopsis thaliana]               602   0.0  
emb|CAN68842.1| hypothetical protein VITISV_023226 [Vitis vinifera]   595   0.0  
dbj|GAU26746.1| hypothetical protein TSUD_317440 [Trifolium subt...   607   0.0  
gb|KYP44457.1| Retrovirus-related Pol polyprotein from transposo...   575   0.0  
gb|KYP57183.1| Retrovirus-related Pol polyprotein from transposo...   580   0.0  
gb|PNX96089.1| copia-type polyprotein, partial [Trifolium pratense]   580   0.0  
gb|PNX96091.1| retrotransposon-related protein [Trifolium pratense]   588   0.0  
gb|PRQ33299.1| putative RNA-directed DNA polymerase [Rosa chinen...   587   0.0  
gb|PNX95763.1| retrotransposon-related protein, partial [Trifoli...   585   0.0  
gb|KYP37051.1| Retrovirus-related Pol polyprotein from transposo...   569   0.0  

>gb|PRQ17740.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1302

 Score =  741 bits (1913), Expect = 0.0
 Identities = 355/492 (72%), Positives = 406/492 (82%)
 Frame = +3

Query: 6    GVELTEAQQKSIADQKLKDLKVKNYLFQAIDRNIMETILNKDTAKHIWDSMKQKYQGSTR 185
            G ELTE Q+K I D KLKDLKVKNYLFQAIDR I+ETILNK+TAKHIWDSM+QKYQGST+
Sbjct: 49   GAELTEGQRKQIEDAKLKDLKVKNYLFQAIDRTIIETILNKETAKHIWDSMRQKYQGSTK 108

Query: 186  VKRAQLQALRKEFETLQMKEGESVDEYFARTLTIANKMKIHGENMKQVVIIEKILRSMAA 365
            VKRAQLQALR+EFE LQMKEGE+VDEYFARTLTIANKMK H ENM ++VI+EKILRSM A
Sbjct: 109  VKRAQLQALRREFEVLQMKEGETVDEYFARTLTIANKMKAHSENMAELVIVEKILRSMTA 168

Query: 366  RFDYVVCSVEESNNLDTLTIDELQSSLLVHEQRMNGHREDEQALKATYDDRFVXXXXXXX 545
            +FDYVVCS+EESNNL T+TIDELQSSLLVHEQRM GH  +EQALK TY+DR         
Sbjct: 169  KFDYVVCSIEESNNLTTMTIDELQSSLLVHEQRMRGHGGEEQALKVTYEDR--TSGRGRG 226

Query: 546  XXXXXXXXXXXXXHTFNKATVECYNCHQLGHFQYECPKWEKGVNFAXXXXXXXXXXXSYV 725
                           FNKA VECY CH+LGHFQYECP+WEKG N+A           +YV
Sbjct: 227  RGGFRGRGRGRSRQQFNKALVECYKCHKLGHFQYECPEWEKGANYAELDEKEEMLLMAYV 286

Query: 726  ELNGSTDEDVWFLDSGCSNHMCGNKKWFSDFDEEFRQSVKLGNNSRMTVLGKGNIRLQIA 905
            ELN S  E+VWFLDSGCSNHM GNKKWF D +E+FRQSVKLGNNS+M V+GKGN+RLQ  
Sbjct: 287  ELNNSKMEEVWFLDSGCSNHMSGNKKWFIDLNEQFRQSVKLGNNSKMAVMGKGNVRLQAN 346

Query: 906  GVTQVITDVFYIPELTNNLLSIGQLQERGVAILIQHGSCKVYHPEKGLIMQTTMSTNRMF 1085
            GVTQV TDV+YIPEL NNLLSIGQLQE+GVAILIQ+G C++YHP KGLIMQT MS NRMF
Sbjct: 347  GVTQVFTDVYYIPELKNNLLSIGQLQEKGVAILIQNGMCQIYHPRKGLIMQTKMSANRMF 406

Query: 1086 ILLARVMPKASTCFQITLEDNTYLWHRRYGHLSFNGLRTLQHKQMVRGLPQLKEPSKVCT 1265
            ++LA ++P+AS CFQ   EDNT+LWH RYGHLSF GL+TLQ++ MV+GLP  K PSK+C 
Sbjct: 407  VILANMLPQASACFQTVSEDNTHLWHCRYGHLSFKGLKTLQYRNMVKGLPDFKMPSKLCK 466

Query: 1266 DCMVGKQHRDAIPKRSLWRASQRLQLVHADICGPIKPISNSKKRYLISFIDDYSRKVWVY 1445
            DCMVGKQHR++IPK+S+WRAS RLQL+H+DICGPIKP+SN++KRYLISFIDDYSRK WVY
Sbjct: 467  DCMVGKQHRESIPKKSMWRASHRLQLIHSDICGPIKPLSNNRKRYLISFIDDYSRKTWVY 526

Query: 1446 FLAEKSEAFMVF 1481
            FL EKS+AF  F
Sbjct: 527  FLNEKSQAFTTF 538


>gb|PRQ52345.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1316

 Score =  722 bits (1863), Expect = 0.0
 Identities = 345/492 (70%), Positives = 402/492 (81%)
 Frame = +3

Query: 6    GVELTEAQQKSIADQKLKDLKVKNYLFQAIDRNIMETILNKDTAKHIWDSMKQKYQGSTR 185
            G ELTE Q+K I D KLKDLKVKNYLFQAIDR IMETILNK+TAKHIWDSM+QKYQGST+
Sbjct: 49   GAELTEGQRKQIEDAKLKDLKVKNYLFQAIDRTIMETILNKETAKHIWDSMRQKYQGSTK 108

Query: 186  VKRAQLQALRKEFETLQMKEGESVDEYFARTLTIANKMKIHGENMKQVVIIEKILRSMAA 365
            VKRAQLQALR+EFE LQMK+GE VDEYFARTLTIANKMK HGENM ++VI+EKILRSM A
Sbjct: 109  VKRAQLQALRREFEVLQMKDGEIVDEYFARTLTIANKMKAHGENMIELVIVEKILRSMTA 168

Query: 366  RFDYVVCSVEESNNLDTLTIDELQSSLLVHEQRMNGHREDEQALKATYDDRFVXXXXXXX 545
            +FDY+VCS+EESNNL T+TI+ELQSSLLVHEQRM  H  +EQAL  TY+DR         
Sbjct: 169  KFDYMVCSIEESNNLTTMTINELQSSLLVHEQRMRSHGGEEQALNVTYEDRTGGRGRGRG 228

Query: 546  XXXXXXXXXXXXXHTFNKATVECYNCHQLGHFQYECPKWEKGVNFAXXXXXXXXXXXSYV 725
                           F+KA VECY CH+LGHFQ+E P+WEKG N+A           +YV
Sbjct: 229  RGGFRGRGRGRGRQQFDKALVECYKCHKLGHFQHEFPEWEKGANYAEHDENEEMLLMAYV 288

Query: 726  ELNGSTDEDVWFLDSGCSNHMCGNKKWFSDFDEEFRQSVKLGNNSRMTVLGKGNIRLQIA 905
            ELN S  E+VWFLDSGCSNHM GNK+WF+D +E+FRQSVKLGNNS+M V+GKGN+RLQ  
Sbjct: 289  ELNNSKMEEVWFLDSGCSNHMSGNKQWFTDLNEQFRQSVKLGNNSKMAVMGKGNVRLQAN 348

Query: 906  GVTQVITDVFYIPELTNNLLSIGQLQERGVAILIQHGSCKVYHPEKGLIMQTTMSTNRMF 1085
            GVTQV TDV+YIPEL NNLLSIGQLQE+GV ILI++G C++YHP KGLIMQT MS NRMF
Sbjct: 349  GVTQVFTDVYYIPELKNNLLSIGQLQEKGVTILIRNGMCQIYHPRKGLIMQTKMSANRMF 408

Query: 1086 ILLARVMPKASTCFQITLEDNTYLWHRRYGHLSFNGLRTLQHKQMVRGLPQLKEPSKVCT 1265
            ++ A ++P+AS CFQ   EDNT+LWH RYGHLSF GLR+LQ+++MV+GLP  K  SK+C 
Sbjct: 409  VIRANMLPQASACFQTVSEDNTHLWHCRYGHLSFKGLRSLQYRKMVKGLPDFKMSSKLCK 468

Query: 1266 DCMVGKQHRDAIPKRSLWRASQRLQLVHADICGPIKPISNSKKRYLISFIDDYSRKVWVY 1445
            DCMVGKQHR++IPK+S+WRAS RLQL+H+DICGPIKP+SNS+KRYLISFIDDYSRK WVY
Sbjct: 469  DCMVGKQHRESIPKKSMWRASHRLQLIHSDICGPIKPLSNSRKRYLISFIDDYSRKTWVY 528

Query: 1446 FLAEKSEAFMVF 1481
            FL EKS+AF  F
Sbjct: 529  FLYEKSQAFTTF 540


>gb|PNX93789.1| copia-type polyprotein [Trifolium pratense]
          Length = 1347

 Score =  673 bits (1737), Expect = 0.0
 Identities = 319/494 (64%), Positives = 393/494 (79%), Gaps = 1/494 (0%)
 Frame = +3

Query: 3    AGVELTEAQQKSIADQKLKDLKVKNYLFQAIDRNIMETILNKDTAKHIWDSMKQKYQGST 182
            AGVE TE Q+K I +QKLKDLK KNYLFQAI R+++ETIL+K+T+K IW+SMKQK+QGS 
Sbjct: 50   AGVEPTEEQRKLIEEQKLKDLKAKNYLFQAISRDVLETILDKETSKSIWESMKQKFQGSN 109

Query: 183  RVKRAQLQALRKEFETLQMKEGESVDEYFARTLTIANKMKIHGENMKQVVIIEKILRSMA 362
            RVKRAQLQALRK+FE L MKEGE+V+ YF+RTLTIANKMK HGE+M Q +I EKILRSM 
Sbjct: 110  RVKRAQLQALRKDFEILHMKEGETVNAYFSRTLTIANKMKAHGESMSQTIITEKILRSMI 169

Query: 363  ARFDYVVCSVEESNNLDTLTIDELQSSLLVHEQRMNGHREDEQALKATYDDRFVXXXXXX 542
            ++FDYVVCS+EESNNLDT+TIDELQSSLLVHEQRM  HRE+EQ LK +++DR+       
Sbjct: 170  SKFDYVVCSIEESNNLDTMTIDELQSSLLVHEQRMTSHREEEQVLKISHEDRY--GRGRG 227

Query: 543  XXXXXXXXXXXXXXHTFNKATVECYNCHQLGHFQYECPKWEKGVNFAXXXXXXXXXXX-S 719
                            +NKA +EC+ CHQLGH+QYECP WE+  N+A            S
Sbjct: 228  RGMFRGGRGRGRGRQPYNKALIECFRCHQLGHYQYECPDWEQKANYAEFEEKEEEILLMS 287

Query: 720  YVELNGSTDEDVWFLDSGCSNHMCGNKKWFSDFDEEFRQSVKLGNNSRMTVLGKGNIRLQ 899
            YVE+     E++WFLDSGCSNHM GNKKWFSD DE FR +VKLGN+SRM V+GKGN+R++
Sbjct: 288  YVEIKHDEKEEMWFLDSGCSNHMSGNKKWFSDLDESFRHTVKLGNDSRMAVIGKGNVRMR 347

Query: 900  IAGVTQVITDVFYIPELTNNLLSIGQLQERGVAILIQHGSCKVYHPEKGLIMQTTMSTNR 1079
            + G TQVI++V+YIPEL NNLLSIGQLQ++G++ILIQHG C +YHP KGLIM+T MS N+
Sbjct: 348  VNGFTQVISNVYYIPELKNNLLSIGQLQDKGLSILIQHGKCMIYHPTKGLIMETIMSGNK 407

Query: 1080 MFILLARVMPKASTCFQITLEDNTYLWHRRYGHLSFNGLRTLQHKQMVRGLPQLKEPSKV 1259
            MF L+A +MP  STCFQ   E+ +YLWH R+GHLS+ GLRTL +K+MV GLP ++ P K+
Sbjct: 408  MFCLVASMMPNESTCFQNVSENESYLWHCRFGHLSYQGLRTLFYKKMVNGLPSIQIPKKL 467

Query: 1260 CTDCMVGKQHRDAIPKRSLWRASQRLQLVHADICGPIKPISNSKKRYLISFIDDYSRKVW 1439
            CT+C++GKQHRD++ K+SLWRAS +LQLVHADICGPIKP SNS KRY +SFIDD++RK W
Sbjct: 468  CTECLIGKQHRDSMSKKSLWRASNKLQLVHADICGPIKPESNSNKRYFLSFIDDFTRKTW 527

Query: 1440 VYFLAEKSEAFMVF 1481
            +YFL EKSEAF +F
Sbjct: 528  IYFLHEKSEAFAMF 541


>gb|KYP38784.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 560

 Score =  630 bits (1624), Expect = 0.0
 Identities = 298/492 (60%), Positives = 378/492 (76%)
 Frame = +3

Query: 6    GVELTEAQQKSIADQKLKDLKVKNYLFQAIDRNIMETILNKDTAKHIWDSMKQKYQGSTR 185
            GVE +EAQ+K + + KLKDLKVKNYLFQAI+R I+ETIL K+T+K IW+SMK+K++G+ R
Sbjct: 44   GVEQSEAQRKRLEELKLKDLKVKNYLFQAIERKILETILVKNTSKQIWESMKRKFEGNAR 103

Query: 186  VKRAQLQALRKEFETLQMKEGESVDEYFARTLTIANKMKIHGENMKQVVIIEKILRSMAA 365
            VKR+ LQALRKEFETL+MK GE V EYF+R L +ANKM+ +GE M+ V ++EKILRS++ 
Sbjct: 104  VKRSHLQALRKEFETLEMKAGEGVTEYFSRVLIVANKMRTYGEQMQDVTVVEKILRSLSE 163

Query: 366  RFDYVVCSVEESNNLDTLTIDELQSSLLVHEQRMNGHREDEQALKATYDDRFVXXXXXXX 545
            +F+YVVCS+EES ++D L+IDELQSSL+VHEQ+   H  +EQALK T             
Sbjct: 164  KFNYVVCSIEESKDIDQLSIDELQSSLMVHEQKFTKHSGEEQALKVT------------- 210

Query: 546  XXXXXXXXXXXXXHTFNKATVECYNCHQLGHFQYECPKWEKGVNFAXXXXXXXXXXXSYV 725
                         H   +ATVECY CHQLGHFQ ECP W K  N+A           SY+
Sbjct: 211  -------------HEGIRATVECYKCHQLGHFQNECPTWNKEANYAEHEEEEEMLLMSYM 257

Query: 726  ELNGSTDEDVWFLDSGCSNHMCGNKKWFSDFDEEFRQSVKLGNNSRMTVLGKGNIRLQIA 905
            ++N +  ED WFLDSGCSNHMCG+K  F + +E+FRQ VKLGNNS+M+VLGKGN+RL++ 
Sbjct: 258  DVNETQREDAWFLDSGCSNHMCGDKALFYNLNEDFRQIVKLGNNSKMSVLGKGNVRLKVN 317

Query: 906  GVTQVITDVFYIPELTNNLLSIGQLQERGVAILIQHGSCKVYHPEKGLIMQTTMSTNRMF 1085
            G T V+T+VFY+PEL NNLLSIGQLQE+G++ILIQ+GSCK+YHPEKGL++QT M+TNRMF
Sbjct: 318  GFTHVVTEVFYVPELKNNLLSIGQLQEKGLSILIQNGSCKIYHPEKGLVIQTEMTTNRMF 377

Query: 1086 ILLARVMPKASTCFQITLEDNTYLWHRRYGHLSFNGLRTLQHKQMVRGLPQLKEPSKVCT 1265
            +L A  MP+  TC   T+++  +LWH RYGHLS  GLRTLQ+K+MV GLP LK P+ VCT
Sbjct: 378  VLTAVPMPQKPTCLHTTVQEIAHLWHCRYGHLSHKGLRTLQYKKMVHGLPPLKSPTDVCT 437

Query: 1266 DCMVGKQHRDAIPKRSLWRASQRLQLVHADICGPIKPISNSKKRYLISFIDDYSRKVWVY 1445
             CM+GKQHRD IPK++ WRA+Q+LQL+HADICGPI P SNSKKRYLI FIDD++ K W+Y
Sbjct: 438  VCMIGKQHRDPIPKKANWRATQKLQLIHADICGPISPTSNSKKRYLICFIDDFTMKTWIY 497

Query: 1446 FLAEKSEAFMVF 1481
            F+ EKSEA ++F
Sbjct: 498  FMVEKSEALVIF 509


>gb|PRQ38021.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 719

 Score =  627 bits (1616), Expect = 0.0
 Identities = 298/500 (59%), Positives = 385/500 (77%), Gaps = 8/500 (1%)
 Frame = +3

Query: 6    GVELTEAQQKSIADQKLKDLKVKNYLFQAIDRNIMETILNKDTAKHIWDSMKQKYQGSTR 185
            G  +T AQ+K++ + KLKD KVKNYLFQ+ID++I++TI+ KDT+KH+WDSMK+KYQG+ R
Sbjct: 52   GEVMTAAQRKTLEELKLKDFKVKNYLFQSIDKSILKTIIQKDTSKHLWDSMKRKYQGNKR 111

Query: 186  VKRAQLQALRKEFETLQMKEGESVDEYFARTLTIANKMKIHGENMKQVVIIEKILRSMAA 365
            V+R+QLQ LR+EFE L+MK GESV +YF+R + +AN M+ +GENM+ V I+EKILR++  
Sbjct: 112  VQRSQLQTLRREFEILEMKSGESVTDYFSRVMMVANDMRNYGENMQDVKIVEKILRTLTD 171

Query: 366  RFDYVVCSVEESNNLDTLTIDELQSSLLVHEQRMNGHREDEQALKATYDDRFVXXXXXXX 545
            +F+Y+VCS+EES ++D L++DELQSSLLVHEQ+      DEQ LK T  +R         
Sbjct: 172  KFNYIVCSIEESKDIDHLSVDELQSSLLVHEQKFRKGNSDEQVLKVTSVERLGPNREEDG 231

Query: 546  XXXXXXXXXXXXXH-------TFNKATVECYNCHQLGHFQYECPKWEKGVNFAXXXXXXX 704
                                 +FNKA VEC+ CH+LGHFQYECP WEK VN+A       
Sbjct: 232  FEGRGRGRGVFRSRGRGRGRQSFNKAVVECFKCHKLGHFQYECPSWEKRVNYAELEEEDE 291

Query: 705  XXXXSYVELNGSTDEDVWFLDSGCSNHMCGNKKWFSDFDEEFRQSVKLGNNSRMTVLGKG 884
                ++VE N S  EDVWFLDSGCSNHMC NK WF++ DEEFR SVKLGNN+RM+V+GKG
Sbjct: 292  LLLMAHVERNDSKPEDVWFLDSGCSNHMCCNKDWFTNIDEEFRHSVKLGNNARMSVMGKG 351

Query: 885  NIRLQIAGVTQVITDVFYIPELTNNLLSIGQLQERGVAILIQHGSCKVYHPEKGLIMQTT 1064
            +IRL++ G+TQVI+DV+++PEL NNLLSIGQLQE+G+AILIQHG CK+YH +KGLIMQT 
Sbjct: 352  SIRLKVDGLTQVISDVYFVPELRNNLLSIGQLQEKGLAILIQHGVCKIYHSKKGLIMQTP 411

Query: 1065 MSTNRMFILLAR-VMPKASTCFQITLEDNTYLWHRRYGHLSFNGLRTLQHKQMVRGLPQL 1241
            M+ NRMF+LLA  V+   STC Q + +D ++LWH RY HL++ GL+TL +++MV+GLPQ+
Sbjct: 412  MTANRMFVLLANVVVTDFSTCMQASSDDLSHLWHCRYSHLNYKGLKTLHYRKMVKGLPQI 471

Query: 1242 KEPSKVCTDCMVGKQHRDAIPKRSLWRASQRLQLVHADICGPIKPISNSKKRYLISFIDD 1421
            K  ++VC DC+VGKQ RD+IPK S WRASQRLQLVHADICGPI P SNS KRY++SFIDD
Sbjct: 472  KASARVCHDCLVGKQSRDSIPKSSQWRASQRLQLVHADICGPITPTSNSDKRYVLSFIDD 531

Query: 1422 YSRKVWVYFLAEKSEAFMVF 1481
            +SRK+WVYFL EKS+AF +F
Sbjct: 532  FSRKMWVYFLTEKSQAFTMF 551


>emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]
          Length = 1265

 Score =  622 bits (1605), Expect = 0.0
 Identities = 314/492 (63%), Positives = 370/492 (75%)
 Frame = +3

Query: 6    GVELTEAQQKSIADQKLKDLKVKNYLFQAIDRNIMETILNKDTAKHIWDSMKQKYQGSTR 185
            GV LT+AQ+K+I DQKLKDLK KNYLFQA+DR+++ETILNKDTAK+IWDS+KQKYQG+TR
Sbjct: 48   GVVLTDAQRKNIDDQKLKDLKAKNYLFQALDRSVLETILNKDTAKNIWDSLKQKYQGTTR 107

Query: 186  VKRAQLQALRKEFETLQMKEGESVDEYFARTLTIANKMKIHGENMKQVVIIEKILRSMAA 365
            VKRA LQALRKEFE L MK GESV+EYFARTLTIANKMK +GEN   VV++EKILRSM  
Sbjct: 108  VKRAHLQALRKEFELLHMKAGESVNEYFARTLTIANKMKANGENKGDVVVVEKILRSMTP 167

Query: 366  RFDYVVCSVEESNNLDTLTIDELQSSLLVHEQRMNGHREDEQALKATYDDRFVXXXXXXX 545
            +FDYVVCS+EES + +TLTIDELQSSLLVHEQRM+ H E+E ALK T+ D++        
Sbjct: 168  KFDYVVCSIEESKDTNTLTIDELQSSLLVHEQRMSSHVEEEHALKITHGDQY--GGRGRG 225

Query: 546  XXXXXXXXXXXXXHTFNKATVECYNCHQLGHFQYECPKWEKGVNFAXXXXXXXXXXXSYV 725
                           FNKATVECYNCH+LG+F++ECP  E   N+A           +YV
Sbjct: 226  RGSFGGRGRGRGRQYFNKATVECYNCHKLGNFKWECPSKENEANYADTQEEMLLM--AYV 283

Query: 726  ELNGSTDEDVWFLDSGCSNHMCGNKKWFSDFDEEFRQSVKLGNNSRMTVLGKGNIRLQIA 905
            ++N +  ED+WFLDSGCSNHMCG K++F DFD  FR SVKLGNN+ M V GKG       
Sbjct: 284  DMNKAHREDMWFLDSGCSNHMCGTKEYFLDFDGSFRDSVKLGNNTSMVVTGKG------- 336

Query: 906  GVTQVITDVFYIPELTNNLLSIGQLQERGVAILIQHGSCKVYHPEKGLIMQTTMSTNRMF 1085
                    VFY+PEL NNLLSIGQLQE+G+ IL Q G CKV+HPE+G+I +  MS+NRMF
Sbjct: 337  --------VFYVPELKNNLLSIGQLQEKGLTILFQSGKCKVFHPERGVITEMKMSSNRMF 388

Query: 1086 ILLARVMPKASTCFQITLEDNTYLWHRRYGHLSFNGLRTLQHKQMVRGLPQLKEPSKVCT 1265
            +L A   P ASTCF    ED  +LWH RYGHLSF GL+TLQ K+MV GLPQLK P ++C 
Sbjct: 389  MLHAISQPIASTCFNAITEDIVHLWHCRYGHLSFKGLKTLQQKKMVNGLPQLKSPLRLCK 448

Query: 1266 DCMVGKQHRDAIPKRSLWRASQRLQLVHADICGPIKPISNSKKRYLISFIDDYSRKVWVY 1445
            DC+VGKQ R + P +S WRASQ L LVHADI GPIKPISNSKKRYLI+F DD+SRK WVY
Sbjct: 449  DCLVGKQQRYSFPWKSTWRASQILXLVHADIXGPIKPISNSKKRYLITFTDDFSRKTWVY 508

Query: 1446 FLAEKSEAFMVF 1481
            FL EKSEAF+VF
Sbjct: 509  FLIEKSEAFVVF 520


>emb|CBI37296.3| unnamed protein product, partial [Vitis vinifera]
          Length = 3048

 Score =  643 bits (1658), Expect = 0.0
 Identities = 316/490 (64%), Positives = 377/490 (76%), Gaps = 1/490 (0%)
 Frame = +3

Query: 15   LTEAQQKSIADQKLKDLKVKNYLFQAIDRNIMETILNKDTAKHIWDSMKQKYQGSTRVKR 194
            LT+AQ+K I DQ+LKDLK KNYLFQA+DR+I+ETILNK T K IWDSMKQK+QG+TRVKR
Sbjct: 76   LTDAQRKHIEDQQLKDLKAKNYLFQALDRSILETILNKKTTKDIWDSMKQKFQGTTRVKR 135

Query: 195  AQLQALRKEFETLQMKEGESVDEYFARTLTIANKMKIHGENMKQVVIIEKILRSMAARFD 374
              LQALRKEF+ L MK GE+V+EYF+RTL IANKMK++GE+     ++EKILRSM ++FD
Sbjct: 136  GNLQALRKEFKILHMKSGETVNEYFSRTLAIANKMKVNGEDKGNTAVVEKILRSMTSKFD 195

Query: 375  YVVCSVEESNNLDTLTIDELQSSLLVHEQRMNGH-REDEQALKATYDDRFVXXXXXXXXX 551
            YVVCS+EES +LDTLTIDELQSSLLVHEQRM  H  E+EQALK T+ D            
Sbjct: 196  YVVCSIEESKDLDTLTIDELQSSLLVHEQRMTSHVLEEEQALKVTHGDH--SGSRGRGHG 253

Query: 552  XXXXXXXXXXXHTFNKATVECYNCHQLGHFQYECPKWEKGVNFAXXXXXXXXXXXSYVEL 731
                         F+KAT+ECYNCH+LGHF +ECP  E G  +A           +YV+L
Sbjct: 254  NYRGRGRGRNRRFFDKATMECYNCHKLGHFAWECPHRETGAYYAKNQEEMLLM--AYVDL 311

Query: 732  NGSTDEDVWFLDSGCSNHMCGNKKWFSDFDEEFRQSVKLGNNSRMTVLGKGNIRLQIAGV 911
            N ++ ED WFLDSGCSNHMCG K +FSDFD  FR SVKLGNN+ M+VLGKGN+RL++  +
Sbjct: 312  NKTSREDTWFLDSGCSNHMCGKKDYFSDFDGTFRDSVKLGNNTSMSVLGKGNVRLKVNEM 371

Query: 912  TQVITDVFYIPELTNNLLSIGQLQERGVAILIQHGSCKVYHPEKGLIMQTTMSTNRMFIL 1091
            TQ+IT VFY+PEL NNLLSIGQLQE+G+ IL QHG CKV+H +KGLIM T MS+NRMF+L
Sbjct: 372  TQIITGVFYVPELKNNLLSIGQLQEKGLTILFQHGKCKVFHSQKGLIMDTKMSSNRMFML 431

Query: 1092 LARVMPKASTCFQITLEDNTYLWHRRYGHLSFNGLRTLQHKQMVRGLPQLKEPSKVCTDC 1271
             A   P +STCF    ED   LWH RYGHLSF GL+TLQ ++MV GLPQ + PSK+C DC
Sbjct: 432  YALSQPISSTCFNTVTEDILQLWHCRYGHLSFQGLKTLQQRKMVNGLPQFQPPSKLCKDC 491

Query: 1272 MVGKQHRDAIPKRSLWRASQRLQLVHADICGPIKPISNSKKRYLISFIDDYSRKVWVYFL 1451
            +VGKQHR +IPK+S WRA++ LQLVHADICGPI PISNSKKRYL++F DD+SRK WVYFL
Sbjct: 492  LVGKQHRSSIPKKSNWRAAEILQLVHADICGPINPISNSKKRYLLTFTDDFSRKTWVYFL 551

Query: 1452 AEKSEAFMVF 1481
             EKSEAF VF
Sbjct: 552  VEKSEAFAVF 561


>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
          Length = 2408

 Score =  634 bits (1634), Expect = 0.0
 Identities = 331/476 (69%), Positives = 345/476 (72%)
 Frame = +3

Query: 6    GVELTEAQQKSIADQKLKDLKVKNYLFQAIDRNIMETILNKDTAKHIWDSMKQKYQGSTR 185
            GVE TEAQQKSIADQKLKDLK                                   GSTR
Sbjct: 49   GVEFTEAQQKSIADQKLKDLK-----------------------------------GSTR 73

Query: 186  VKRAQLQALRKEFETLQMKEGESVDEYFARTLTIANKMKIHGENMKQVVIIEKILRSMAA 365
            VKRAQLQALRKEFE LQMKEGESVD YFARTL IANKMKIHGENM+QVVIIEKILRSM +
Sbjct: 74   VKRAQLQALRKEFEVLQMKEGESVDAYFARTLIIANKMKIHGENMQQVVIIEKILRSMTS 133

Query: 366  RFDYVVCSVEESNNLDTLTIDELQSSLLVHEQRMNGHREDEQALKATYDDRFVXXXXXXX 545
            RFDYV                           RMNGH  DEQALK  YDDR         
Sbjct: 134  RFDYV---------------------------RMNGHGGDEQALKVIYDDRIGGRGGGRA 166

Query: 546  XXXXXXXXXXXXXHTFNKATVECYNCHQLGHFQYECPKWEKGVNFAXXXXXXXXXXXSYV 725
                          TFNKA VECY CHQLGHFQYECPKWEK  N+A           SYV
Sbjct: 167  RGAFRGRGRGRGRQTFNKAIVECYKCHQLGHFQYECPKWEKEANYAELEEKEEMLLMSYV 226

Query: 726  ELNGSTDEDVWFLDSGCSNHMCGNKKWFSDFDEEFRQSVKLGNNSRMTVLGKGNIRLQIA 905
            ELN S  EDVWFLDSGCSNHMC NK+WF D DEEFRQSVKLGNNS+M VLGK NIRLQIA
Sbjct: 227  ELNQSRREDVWFLDSGCSNHMCANKEWFLDLDEEFRQSVKLGNNSKMAVLGKDNIRLQIA 286

Query: 906  GVTQVITDVFYIPELTNNLLSIGQLQERGVAILIQHGSCKVYHPEKGLIMQTTMSTNRMF 1085
            GVTQVITDVFYIPEL NNLLS+GQLQERGVAILIQHG C+VYHP+KGLIMQT MST RMF
Sbjct: 287  GVTQVITDVFYIPELKNNLLSVGQLQERGVAILIQHGVCRVYHPKKGLIMQTAMSTKRMF 346

Query: 1086 ILLARVMPKASTCFQITLEDNTYLWHRRYGHLSFNGLRTLQHKQMVRGLPQLKEPSKVCT 1265
            IL AR++ KA TCFQ  LEDNT+LWH RYGHLSF GLRTLQ+KQMVRGLPQLK PSK+CT
Sbjct: 347  ILSARILSKAPTCFQTILEDNTHLWHCRYGHLSFKGLRTLQYKQMVRGLPQLKAPSKICT 406

Query: 1266 DCMVGKQHRDAIPKRSLWRASQRLQLVHADICGPIKPISNSKKRYLISFIDDYSRK 1433
            DCMVGKQHRDAIPKRSLWRASQRLQLVHADICGPIKPISNSKKRY ISFIDDYS +
Sbjct: 407  DCMVGKQHRDAIPKRSLWRASQRLQLVHADICGPIKPISNSKKRYFISFIDDYSHR 462



 Score = 99.8 bits (247), Expect = 3e-18
 Identities = 74/253 (29%), Positives = 116/253 (45%), Gaps = 11/253 (4%)
 Frame = +3

Query: 756  WFLDSGCSNHMCGNKKWFSDFDEEFRQ-SVKLGNNSRMTVLGKGNIRLQIAGVTQVITDV 932
            W  DS C NHM  +   FS  D      ++ + + S M     GN    ++     +  V
Sbjct: 1464 WLFDSACXNHMTPHSSLFSKLDPAPHPLNIHIADGSTM----HGNSLGFVSTSNLSVPGV 1519

Query: 933  FYIPELTNNLLSIGQLQERGVAILIQHGSCKVYHPEKGLIMQTTMSTNRMFILLARVMPK 1112
            F++P+L+ NL S+GQL E G  ++  +  C V  P  G  + T      MF +    +P 
Sbjct: 1520 FHVPDLSYNLCSVGQLAELGYRLIFXYSGCIVQDPRTGXELGTGPRVGXMFPVSNLHLPP 1579

Query: 1113 ------ASTCFQITLEDNTYLWHRRYGHLSFNGLRTLQHKQMVRGLPQLKEPSK---VCT 1265
                  A+    ++   +  L H R GH S + ++ L    + RGL  L   SK    CT
Sbjct: 1580 VAPVSIATAAAAVSSLPSLALXHSRLGHXSSSRVQQL----VSRGL--LGSXSKDIFXCT 1633

Query: 1266 DCMVGKQHRDAIPKRSLWRASQRL-QLVHADICGPIKPISNSKKRYLISFIDDYSRKVWV 1442
             C + KQ   A+P  +    S  + +L+H+D+ GP    S    RY + FIDDYSR  W+
Sbjct: 1634 SCXLXKQ--PALPFNNXESISNSIFELIHSDVWGPSPVASIGXSRYFVVFIDDYSRYSWI 1691

Query: 1443 YFLAEKSEAFMVF 1481
            + +  +SE   ++
Sbjct: 1692 FPMKSRSEILSIY 1704


>gb|KZV14234.1| hypothetical protein F511_44122 [Dorcoceras hygrometricum]
          Length = 490

 Score =  579 bits (1493), Expect = 0.0
 Identities = 287/492 (58%), Positives = 354/492 (71%), Gaps = 2/492 (0%)
 Frame = +3

Query: 12   ELTEAQQKSIADQKLKDLKVKNYLFQAIDRNIMETILNKDTAKHIWDSMKQKYQGSTRVK 191
            + +EAQ+KS+ + KLKDLKVKNYLFQ+I R I+ETIL+K  +K IW SM+QKYQGST+VK
Sbjct: 27   QTSEAQRKSMEEAKLKDLKVKNYLFQSIVREILETILDKGISKAIWVSMRQKYQGSTKVK 86

Query: 192  RAQLQALRKEFETLQMKEGESVDEYFARTLTIANKMKIHGENMKQVVIIEKILRSMAARF 371
            RAQLQALR+EFE L MKEGE +D +  RTL I NKMK +GENM+Q  ++ KILRS+ ++F
Sbjct: 87   RAQLQALRREFELLAMKEGEKMDSFLGRTLGIVNKMKANGENMEQSTVVSKILRSLTSKF 146

Query: 372  DYVVCSVEESNNLDTLTIDELQSSLLVHEQRMNGHREDEQALKATYDDRFVXXXXXXXXX 551
            +Y+VCS+EESN+L TLTIDEL  SLLVHEQR+ GH+ +EQ LK T+DD F          
Sbjct: 147  NYIVCSIEESNDLSTLTIDELHGSLLVHEQRLQGHQVEEQVLKVTHDDSF----GRGRAF 202

Query: 552  XXXXXXXXXXXHTFNKATVECYNCHQLGHFQYECPKWEKGVNFAXXXXXXXXXXXSYVEL 731
                          NKA +EC+ CHQLGHFQYECP WEK                     
Sbjct: 203  SRGGRGRGRGRPPLNKAIIECFKCHQLGHFQYECPDWEK--------------------- 241

Query: 732  NGSTDEDVWFLDSGCSNHMCGNKKWFSDFDEEFRQSVKLGNNSRMTVLGKGNIRLQIAGV 911
                 E+VWFLDSGCSNHM GNK WFS  +E   Q+VKLGN+  M V+ KG++R+Q+ GV
Sbjct: 242  -----EEVWFLDSGCSNHMTGNKGWFSTLEEGLCQTVKLGNDMTMNVVAKGSVRMQVNGV 296

Query: 912  TQVITDVFYIPELTNNLLSIGQLQERGVAILIQHGSCKVYHPEKGLIMQTTMSTNRMFIL 1091
            TQVI+DV ++PEL NNLLS+GQLQE+G+AILIQ+G+CKV+H  KGLIMQT MS NRMF +
Sbjct: 297  TQVISDVNFVPELKNNLLSLGQLQEKGLAILIQNGTCKVFHSGKGLIMQTNMSGNRMFYV 356

Query: 1092 LARVMPKASTCFQ--ITLEDNTYLWHRRYGHLSFNGLRTLQHKQMVRGLPQLKEPSKVCT 1265
            LA   PK + C Q  + +E   +LWH R+GHL+  GL TL  K +V GLP LK P K CT
Sbjct: 357  LATAAPKENLCLQTELEMEQEAHLWHCRFGHLNHKGLHTLSQKHLVAGLPNLKFPKKTCT 416

Query: 1266 DCMVGKQHRDAIPKRSLWRASQRLQLVHADICGPIKPISNSKKRYLISFIDDYSRKVWVY 1445
             C++GKQ R AIPK S+WRAS++LQLVHADI GP+KP SNS KRY+++FIDD+SRK WVY
Sbjct: 417  TCLIGKQPRTAIPKNSMWRASKKLQLVHADISGPLKPSSNSNKRYILTFIDDFSRKAWVY 476

Query: 1446 FLAEKSEAFMVF 1481
            FL EKSEA   F
Sbjct: 477  FLHEKSEALHHF 488


>gb|KYP42102.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 538

 Score =  577 bits (1488), Expect = 0.0
 Identities = 289/492 (58%), Positives = 355/492 (72%)
 Frame = +3

Query: 6    GVELTEAQQKSIADQKLKDLKVKNYLFQAIDRNIMETILNKDTAKHIWDSMKQKYQGSTR 185
            GV  TEAQ+K   +QKLKDLK KNYLFQA+DR+I+ETI+NKDT+K IWDSMK+KYQG+TR
Sbjct: 49   GVTQTEAQKKICEEQKLKDLKAKNYLFQALDRSILETIINKDTSKSIWDSMKKKYQGTTR 108

Query: 186  VKRAQLQALRKEFETLQMKEGESVDEYFARTLTIANKMKIHGENMKQVVIIEKILRSMAA 365
            VKRA LQALRKE+E   MKEGESV+EY AR L I NKMK +GE++K   I+EKILRSM  
Sbjct: 109  VKRANLQALRKEYEIAHMKEGESVNEYIARILVITNKMKANGEDLKDFAIVEKILRSMTP 168

Query: 366  RFDYVVCSVEESNNLDTLTIDELQSSLLVHEQRMNGHREDEQALKATYDDRFVXXXXXXX 545
            +F+YVVCS+EES +   L++DELQSSLLVHEQRM+    +EQALK T+ +++        
Sbjct: 169  KFNYVVCSIEESKDTSMLSLDELQSSLLVHEQRMSNTVHEEQALKVTHGNQYAGRGRGRG 228

Query: 546  XXXXXXXXXXXXXHTFNKATVECYNCHQLGHFQYECPKWEKGVNFAXXXXXXXXXXXSYV 725
                           FNKATVE + CH+LGHFQ+EC K       +           +YV
Sbjct: 229  GFGGRGRGRNG--QNFNKATVESFACHKLGHFQWECNKGVANFAESQVESEEHMLLMAYV 286

Query: 726  ELNGSTDEDVWFLDSGCSNHMCGNKKWFSDFDEEFRQSVKLGNNSRMTVLGKGNIRLQIA 905
            E       D+WFLDSGCSNHMCG +++FSD DE F   VKLGNNS + V GKGNIRL+I 
Sbjct: 287  EEIEQHKTDMWFLDSGCSNHMCGKREYFSDLDENFTDLVKLGNNSNIVVNGKGNIRLKID 346

Query: 906  GVTQVITDVFYIPELTNNLLSIGQLQERGVAILIQHGSCKVYHPEKGLIMQTTMSTNRMF 1085
            G+  +I+ VFY+ EL NNLLS+GQLQE+G++IL Q G CK+YHP+KGLIM+  M  NRMF
Sbjct: 347  GIISIISGVFYVLELKNNLLSLGQLQEKGLSILFQQGHCKIYHPDKGLIMKANMFANRMF 406

Query: 1086 ILLARVMPKASTCFQITLEDNTYLWHRRYGHLSFNGLRTLQHKQMVRGLPQLKEPSKVCT 1265
            IL +  +P +STCF+I  ED  +LWH R+GHLSF GL+TLQ K+MV+GLP LK PSK+C 
Sbjct: 407  ILHSISLPISSTCFKIATEDVAHLWHCRFGHLSFKGLQTLQQKEMVKGLPLLKSPSKLCK 466

Query: 1266 DCMVGKQHRDAIPKRSLWRASQRLQLVHADICGPIKPISNSKKRYLISFIDDYSRKVWVY 1445
            DC+ GKQHRD+ P +S WRASQ LQLVHADICGPIKP SNS KRYLI+FIDD+S+K    
Sbjct: 467  DCIAGKQHRDSFPIKSSWRASQILQLVHADICGPIKPASNSNKRYLITFIDDFSQKNMGV 526

Query: 1446 FLAEKSEAFMVF 1481
                K  +F  F
Sbjct: 527  IFDRKIISFCCF 538


>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
          Length = 1339

 Score =  602 bits (1551), Expect = 0.0
 Identities = 286/491 (58%), Positives = 372/491 (75%), Gaps = 2/491 (0%)
 Frame = +3

Query: 15   LTEAQQKSIADQKLKDLKVKNYLFQAIDRNIMETILNKDTAKHIWDSMKQKYQGSTRVKR 194
            ++EAQ+ ++ + KLKDLKVKN+LFQAIDR I+ETIL+K T+K IW+SMK+KYQGST+VKR
Sbjct: 53   VSEAQRSAVEEAKLKDLKVKNFLFQAIDREILETILDKSTSKAIWESMKKKYQGSTKVKR 112

Query: 195  AQLQALRKEFETLQMKEGESVDEYFARTLTIANKMKIHGENMKQVVIIEKILRSMAARFD 374
            AQLQALRKEFE L MKEGE +D +  RTLT+ NKMK +GE M+Q  I+ KILRS+  +F+
Sbjct: 113  AQLQALRKEFELLAMKEGEKIDTFLGRTLTVVNKMKTNGEVMEQSTIVSKILRSLTPKFN 172

Query: 375  YVVCSVEESNNLDTLTIDELQSSLLVHEQRMNGHREDEQALKATYDDRFVXXXXXXXXXX 554
            YVVCS+EESN+L TL+IDEL  SLLVHEQR+NGH ++EQALK T+++R            
Sbjct: 173  YVVCSIEESNDLSTLSIDELHGSLLVHEQRLNGHVQEEQALKVTHEERPSQGRGRGVFRG 232

Query: 555  XXXXXXXXXXHTFNKATVECYNCHQLGHFQYECPKWEKGVNFAXXXXXXXXXXXSYVELN 734
                         N+A VECY CH LGHFQYECP+WEK  N+A           +YVE N
Sbjct: 233  SRGRGRGRGRSGTNRAIVECYKCHNLGHFQYECPEWEKNANYAELEEEEELLLMAYVEQN 292

Query: 735  GSTDEDVWFLDSGCSNHMCGNKKWFSDFDEEFRQSVKLGNNSRMTVLGKGNIRLQIAGVT 914
             +  ++VWFLDSGCSNHM G+K+WFS+ +E F ++VKLGN++RM+V+GKG++++++ GVT
Sbjct: 293  QANRDEVWFLDSGCSNHMTGSKEWFSELEEGFNRTVKLGNDTRMSVVGKGSVKVKVNGVT 352

Query: 915  QVITDVFYIPELTNNLLSIGQLQERGVAILIQHGSCKVYHPEKGLIMQTTMSTNRMFILL 1094
            QVI +V+Y+PEL NNLLS+GQLQERG+AILI+ G+CKVYHP KG IM+T MS NRMF LL
Sbjct: 353  QVIPEVYYVPELRNNLLSLGQLQERGLAILIRDGTCKVYHPSKGAIMETNMSGNRMFFLL 412

Query: 1095 ARVMPKASTCFQI--TLEDNTYLWHRRYGHLSFNGLRTLQHKQMVRGLPQLKEPSKVCTD 1268
            A    K S C Q    ++   +LWH R+GHL+  GL+ L HK+MV GLP LK   ++C  
Sbjct: 413  ASKPQKNSLCLQTEEVMDKENHLWHCRFGHLNQEGLKLLAHKKMVIGLPILKATKEICAI 472

Query: 1269 CMVGKQHRDAIPKRSLWRASQRLQLVHADICGPIKPISNSKKRYLISFIDDYSRKVWVYF 1448
            C+ GKQHR+++ K++ W++S +LQLVH+DICGPI PIS+S KRY++SFIDD++RK WVYF
Sbjct: 473  CLTGKQHRESMSKKTSWKSSTQLQLVHSDICGPITPISHSGKRYILSFIDDFTRKTWVYF 532

Query: 1449 LAEKSEAFMVF 1481
            L EKSEAF  F
Sbjct: 533  LHEKSEAFATF 543


>emb|CAN68842.1| hypothetical protein VITISV_023226 [Vitis vinifera]
          Length = 1146

 Score =  595 bits (1535), Expect = 0.0
 Identities = 313/479 (65%), Positives = 335/479 (69%)
 Frame = +3

Query: 6    GVELTEAQQKSIADQKLKDLKVKNYLFQAIDRNIMETILNKDTAKHIWDSMKQKYQGSTR 185
            GVELTEAQQKSI DQKLKDLK                                       
Sbjct: 354  GVELTEAQQKSITDQKLKDLK--------------------------------------- 374

Query: 186  VKRAQLQALRKEFETLQMKEGESVDEYFARTLTIANKMKIHGENMKQVVIIEKILRSMAA 365
                 LQALRKEFE LQMKEGESVD YF RTL IANKMKIHGENM+QVVIIEKILRSM  
Sbjct: 375  -----LQALRKEFEVLQMKEGESVDAYFTRTLIIANKMKIHGENMQQVVIIEKILRSMT- 428

Query: 366  RFDYVVCSVEESNNLDTLTIDELQSSLLVHEQRMNGHREDEQALKATYDDRFVXXXXXXX 545
                                    SSLLVHE  MN H EDEQALK TYDDR         
Sbjct: 429  ------------------------SSLLVHENMMNQHGEDEQALKVTYDDRIGGRGGSRA 464

Query: 546  XXXXXXXXXXXXXHTFNKATVECYNCHQLGHFQYECPKWEKGVNFAXXXXXXXXXXXSYV 725
                          TF+KA V+CY CHQLGHFQYECPKWEK  N             SYV
Sbjct: 465  RGAFQGRGRGRGGQTFSKAIVKCYKCHQLGHFQYECPKWEKEANNVELEEKEEMLLMSYV 524

Query: 726  ELNGSTDEDVWFLDSGCSNHMCGNKKWFSDFDEEFRQSVKLGNNSRMTVLGKGNIRLQIA 905
            ELN S  EDVWFLDS CSNH C NK+WFS  DEEFRQSVKLGNNS+MT+LGKGNIR +IA
Sbjct: 525  ELNQSRREDVWFLDSRCSNHTCANKEWFSGLDEEFRQSVKLGNNSKMTMLGKGNIRWKIA 584

Query: 906  GVTQVITDVFYIPELTNNLLSIGQLQERGVAILIQHGSCKVYHPEKGLIMQTTMSTNRMF 1085
            GVTQVITDVFYIPEL NNLLS+GQLQERGVAILIQHG C+VYHP+KG IMQTTM  N+MF
Sbjct: 585  GVTQVITDVFYIPELKNNLLSVGQLQERGVAILIQHGVCRVYHPKKGFIMQTTMYANKMF 644

Query: 1086 ILLARVMPKASTCFQITLEDNTYLWHRRYGHLSFNGLRTLQHKQMVRGLPQLKEPSKVCT 1265
            ILLA+++ KASTCFQ  LEDNT+LWH RYGHLSF GLRTLQ+KQM RGLPQLK PSK+CT
Sbjct: 645  ILLAKILSKASTCFQTILEDNTHLWHCRYGHLSFKGLRTLQYKQMGRGLPQLKAPSKICT 704

Query: 1266 DCMVGKQHRDAIPKRSLWRASQRLQLVHADICGPIKPISNSKKRYLISFIDDYSRKVWV 1442
            DCM+ KQH+DAIPKRSLWRASQRLQLVHA+ICGPIKP+SNSKKRY ISFIDDYSRK+ V
Sbjct: 705  DCMLRKQHKDAIPKRSLWRASQRLQLVHANICGPIKPVSNSKKRYFISFIDDYSRKIGV 763


>dbj|GAU26746.1| hypothetical protein TSUD_317440 [Trifolium subterraneum]
          Length = 1608

 Score =  607 bits (1565), Expect = 0.0
 Identities = 293/488 (60%), Positives = 368/488 (75%), Gaps = 3/488 (0%)
 Frame = +3

Query: 18   TEAQQKSIADQKLKDLKVKNYLFQAIDRNIMETILNKDTAKHIWDSMKQKYQGSTRVKRA 197
            +EAQ+KS+ + KLKDLKVKNYLFQAIDR I+ETIL+K T++ IW SM+QKYQGST+VKRA
Sbjct: 54   SEAQRKSVEEAKLKDLKVKNYLFQAIDREILETILDKGTSRAIWRSMQQKYQGSTKVKRA 113

Query: 198  QLQALRKEFETLQMKEGESVDEYFARTLTIANKMKIHGENMKQVVIIEKILRSMAARFDY 377
            QLQALR+EFE L MKEGE VD +  RTL + NKMK +GE M+Q  ++ KILRS+ ++F+Y
Sbjct: 114  QLQALRREFELLTMKEGEKVDSFLGRTLHVVNKMKSNGETMEQSTVVSKILRSLTSKFNY 173

Query: 378  VVCSVEESNNLDTLTIDELQSSLLVHEQRMNGHREDEQALKATYDDRFVXXXXXXXXXXX 557
            VVCS+EESN+L TL+IDEL  SLLVHEQRM G + +E  LK T DDR V           
Sbjct: 174  VVCSIEESNDLSTLSIDELHGSLLVHEQRMQGFQAEEHVLKITSDDRPVRGRGGRGLYRG 233

Query: 558  XXXXXXXXXHTFNKATVECYNCHQLGHFQYECPKWEKGVNFAXXXXXXXXXXXSYVELNG 737
                      + N+AT+EC+ CH+LGHFQYECP WE   N+A           +Y EL  
Sbjct: 234  GRGRGRGR-QSLNRATIECFKCHKLGHFQYECPDWENKANYAELEEEEELLLMAYEELRQ 292

Query: 738  STDEDVWFLDSGCSNHMCGNKKWFSDFDEEFRQSVKLGNNSRMTVLGKGNIRLQIAGVTQ 917
             + E+ WFLDSGCSNHM GNKKWFS+ +E F ++VKLGN++ M V+ KG+IR+QI GVTQ
Sbjct: 293  PSQEEAWFLDSGCSNHMTGNKKWFSEMEEGFCRTVKLGNDTTMAVVAKGSIRVQINGVTQ 352

Query: 918  VITDVFYIPELTNNLLSIGQLQERGVAILIQHGSCKVYHPEKGLIMQTTMSTNRMFILLA 1097
            VI+DV+++PEL NNLLS+GQLQE+G+AILIQ+ +CKV+HP+KGLIM T+M  NRMF L  
Sbjct: 353  VISDVYFVPELKNNLLSLGQLQEKGLAILIQNNTCKVFHPDKGLIMHTSMKGNRMFYLTV 412

Query: 1098 RVMP-KASTCFQITL--EDNTYLWHRRYGHLSFNGLRTLQHKQMVRGLPQLKEPSKVCTD 1268
               P K S C Q  +  E  T LWH R+GHL++ GL TL +K+MV GLP LK P K+CT 
Sbjct: 413  SAAPNKHSMCLQAEMMSEKETQLWHSRFGHLNYKGLNTLSNKKMVIGLPSLKSPKKICTT 472

Query: 1269 CMVGKQHRDAIPKRSLWRASQRLQLVHADICGPIKPISNSKKRYLISFIDDYSRKVWVYF 1448
            C++GKQHR++IPK+S WRAS++LQLVHADICGPI P SNS KRY++SFIDD++RK W+YF
Sbjct: 473  CLIGKQHRESIPKKSSWRASKKLQLVHADICGPITPSSNSNKRYILSFIDDFTRKAWIYF 532

Query: 1449 LAEKSEAF 1472
            L EKSEAF
Sbjct: 533  LHEKSEAF 540


>gb|KYP44457.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 690

 Score =  575 bits (1483), Expect = 0.0
 Identities = 274/493 (55%), Positives = 354/493 (71%), Gaps = 1/493 (0%)
 Frame = +3

Query: 6    GVELTEAQQKSIADQKLKDLKVKNYLFQAIDRNIMETILNKDTAKHIWDSMKQKYQGSTR 185
            G   TE Q+K   + KLKD +VKNYL QAIDR I+ETIL K+T+K IWDS+K+KY+G+ R
Sbjct: 51   GSAATEDQKKKRDEMKLKDFQVKNYLIQAIDRTILETILKKNTSKEIWDSIKRKYEGNAR 110

Query: 186  VKRAQLQALRKEFETLQMKEGESVDEYFARTLTIANKMKIHGENMKQVVIIEKILRSMAA 365
            VKR  LQ LRKEFE L+MK GES+  YF+R +++A+KM+ +GE M+ V+I+EKILRS+  
Sbjct: 111  VKRLILQGLRKEFEILEMKSGESITNYFSRVMSVASKMRTYGEQMQDVIIVEKILRSLTD 170

Query: 366  RFDYVVCSVEESNNLDTLTIDELQSSLLVHEQRMNGHREDEQALKATYDDRFVXXXXXXX 545
            RF+Y+VCS+EES ++D+L+IDELQSSL+VHEQ+ +   E+EQALK + ++R         
Sbjct: 171  RFNYIVCSIEESKDIDSLSIDELQSSLIVHEQKFHKKHEEEQALKVSSEERNDNGGRGRG 230

Query: 546  XXXXXXXXXXXXXHTFNKATVECYNCHQLGHFQYECPKWEKGVNFAXXXXXXXXXXXSYV 725
                            N+AT+EC+ CH+LGH++YECP W+    +            +Y 
Sbjct: 231  SYRGRGRGRGRGRGRQNRATIECFKCHKLGHYKYECPDWD--AYYVAFNEEEELLLMAYE 288

Query: 726  ELNGSTDEDVWFLDSGCSNHMCGNKKWFSDFDEEFRQSVKLGNNSRMTVLGKGNIRLQIA 905
            +L+     + WFLDSGCSNHMCGN+ WF + D+ F+Q VKLGNN+RM V GKG++RL I 
Sbjct: 289  DLHDVQTTNAWFLDSGCSNHMCGNRAWFKEVDDTFKQHVKLGNNTRMEVTGKGSVRLNIK 348

Query: 906  GVTQVITDVFYIPELTNNLLSIGQLQERGVAILIQHGSCKVYHPEKGLIMQTTMSTNRMF 1085
            GVT VITDVF +PEL NNLLSIGQLQE+G+ ++ Q G+CK+YHP+KGLI++T M+TN MF
Sbjct: 349  GVTHVITDVFLVPELKNNLLSIGQLQEKGLTVMFQSGTCKLYHPDKGLILETNMTTNIMF 408

Query: 1086 ILLARVMPKASTCFQITLEDNTYLWHRRYGHLSFNGLRTLQHKQMVRGLP-QLKEPSKVC 1262
            IL A+   K  +CF I+ +D + LWH RY HLS  GLR LQ K MVRGLP  L     VC
Sbjct: 409  ILFAQSATKKDSCFHISTQDLSSLWHHRYAHLSHKGLRILQSKGMVRGLPSSLSTTENVC 468

Query: 1263 TDCMVGKQHRDAIPKRSLWRASQRLQLVHADICGPIKPISNSKKRYLISFIDDYSRKVWV 1442
             DC  GKQHRD IPK+S WRA Q+L+L+HADICGPI P SNS+KRY + FIDDYSRK W+
Sbjct: 469  EDCTKGKQHRDPIPKKSQWRAKQKLELIHADICGPITPSSNSQKRYFLCFIDDYSRKTWI 528

Query: 1443 YFLAEKSEAFMVF 1481
            YFL +KSEAF  F
Sbjct: 529  YFLTKKSEAFHYF 541


>gb|KYP57183.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 884

 Score =  580 bits (1495), Expect = 0.0
 Identities = 284/493 (57%), Positives = 356/493 (72%), Gaps = 1/493 (0%)
 Frame = +3

Query: 6    GVELTEAQQKSIADQKLKDLKVKNYLFQAIDRNIMETILNKDTAKHIWDSMKQKYQGSTR 185
            G  +TEAQ+K++ DQKLKDLK KNYLFQAIDR I+ETIL KDTAK IWDSMK KYQG+ R
Sbjct: 26   GTIMTEAQRKTLEDQKLKDLKTKNYLFQAIDRTILETILKKDTAKDIWDSMKTKYQGTAR 85

Query: 186  VKRAQLQALRKEFETLQMKEGESVDEYFARTLTIANKMKIHGENMKQVVIIEKILRSMAA 365
            VKRAQLQALRKEFE L MKEGESV++YFARTL++ANKM+IHGE ++ V ++EKILRSM  
Sbjct: 86   VKRAQLQALRKEFEILHMKEGESVNDYFARTLSVANKMRIHGEKLEDVAVVEKILRSMTR 145

Query: 366  RFDYVVCSVEESNNLDTLTIDELQSSLLVHEQRMNGHREDEQALKATYDDRFVXXXXXXX 545
            +FDYVVCS+EESN++D+L+ID LQSSLLVHEQRM  +  DEQALK T  +          
Sbjct: 146  KFDYVVCSIEESNDIDSLSIDVLQSSLLVHEQRMICYVVDEQALKITTHEGTTSTGRGRG 205

Query: 546  XXXXXXXXXXXXXHTFNKATVECYNCHQLGHFQYECPKWEKGVNFAXXXXXXXXXXXSYV 725
                           F+K  VECY+CH+LGH+QYECP  EK                +Y+
Sbjct: 206  NFRGRGRGRGRHAQ-FDKTRVECYHCHKLGHYQYECPDKEKETKVNLVEFEGEMLLMAYI 264

Query: 726  ELNGSTDEDVWFLDSGCSNHMCGNKKWFSDFDEEFRQSVKLGNNSRMTVLGKGNIRLQIA 905
            +   ++  D W+LDSGCSNHMCGNK  F + DE FR++VKLG+NS ++V+GKG+I+  + 
Sbjct: 265  DKKENSSGDTWYLDSGCSNHMCGNKSLFYNMDETFRETVKLGDNSCISVMGKGDIKFHMK 324

Query: 906  GVT-QVITDVFYIPELTNNLLSIGQLQERGVAILIQHGSCKVYHPEKGLIMQTTMSTNRM 1082
              T   I++VFYIP+L +NL+S+GQLQERG  I+IQ   C+++HPEKGLI+   M+ NRM
Sbjct: 325  NNTVHTISNVFYIPDLKSNLISMGQLQERGYIIIIQQSRCQIHHPEKGLIVDAKMTANRM 384

Query: 1083 FILLARVMPKASTCFQITLEDNTYLWHRRYGHLSFNGLRTLQHKQMVRGLPQLKEPSKVC 1262
            F +   +      CF   ++D T+LWH RYGHLSF GL+TL  K MV GLP++  P+++C
Sbjct: 385  FPM--HIQYDIQKCFSTRVQDPTWLWHLRYGHLSFKGLKTLHEKNMVEGLPKINCPTEIC 442

Query: 1263 TDCMVGKQHRDAIPKRSLWRASQRLQLVHADICGPIKPISNSKKRYLISFIDDYSRKVWV 1442
             DC+VGKQHRD+ P    WRA Q LQLVH+DICGPI P SN  KRY I FIDD+SRK WV
Sbjct: 443  EDCIVGKQHRDSFPHGKAWRAQQILQLVHSDICGPINPTSNGNKRYFIIFIDDHSRKTWV 502

Query: 1443 YFLAEKSEAFMVF 1481
            YFL EKSEAF++F
Sbjct: 503  YFLQEKSEAFLIF 515


>gb|PNX96089.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 1062

 Score =  580 bits (1496), Expect = 0.0
 Identities = 283/485 (58%), Positives = 361/485 (74%)
 Frame = +3

Query: 27   QQKSIADQKLKDLKVKNYLFQAIDRNIMETILNKDTAKHIWDSMKQKYQGSTRVKRAQLQ 206
            Q K   + KLKD KVKNYLFQAIDR IMETIL KD+AK IWDSMKQKY+GS +VKRA LQ
Sbjct: 81   QLKKGEESKLKDFKVKNYLFQAIDRTIMETILLKDSAKGIWDSMKQKYRGSNKVKRAHLQ 140

Query: 207  ALRKEFETLQMKEGESVDEYFARTLTIANKMKIHGENMKQVVIIEKILRSMAARFDYVVC 386
            AL KE E L+MK+GE+V+EYFARTL+I NKMKIHGE ++ V I+EKILRSM  +F+YVVC
Sbjct: 141  ALCKELELLEMKDGETVNEYFARTLSIINKMKIHGERVEPVTIVEKILRSMTPKFNYVVC 200

Query: 387  SVEESNNLDTLTIDELQSSLLVHEQRMNGHREDEQALKATYDDRFVXXXXXXXXXXXXXX 566
            ++EESN++  L++DELQSSL+VHEQRM G RE++Q LK     R                
Sbjct: 201  AIEESNDVTALSVDELQSSLIVHEQRMKGQREEDQILKVINAGR---TNNRGRGRGGFRG 257

Query: 567  XXXXXXHTFNKATVECYNCHQLGHFQYECPKWEKGVNFAXXXXXXXXXXXSYVELNGSTD 746
                   +FNK  +ECY+CH+LGHFQ +CP W++  N+A           ++ E  GS D
Sbjct: 258  GRGRGRQSFNKDNIECYHCHKLGHFQSDCPAWDEKANYAEFDEGEEMLLMAHSE-KGSYD 316

Query: 747  EDVWFLDSGCSNHMCGNKKWFSDFDEEFRQSVKLGNNSRMTVLGKGNIRLQIAGVTQVIT 926
            + VWFLDSGC NHMCG K WF + DE+FR SVKLG+NSRM V+GKGN++L+I G+TQVIT
Sbjct: 317  KKVWFLDSGCRNHMCGTKDWFFNLDEQFRISVKLGDNSRMMVVGKGNVKLRIGGITQVIT 376

Query: 927  DVFYIPELTNNLLSIGQLQERGVAILIQHGSCKVYHPEKGLIMQTTMSTNRMFILLARVM 1106
            +V+YIPEL NNLLSIGQLQE+G+ ++ +   C+VYH E+G+IMQ  M+ NRM++++  V+
Sbjct: 377  NVYYIPELKNNLLSIGQLQEKGLTVVFKEDMCRVYHQERGVIMQCKMTANRMYVIMVDVV 436

Query: 1107 PKASTCFQITLEDNTYLWHRRYGHLSFNGLRTLQHKQMVRGLPQLKEPSKVCTDCMVGKQ 1286
                TCF++T ED TYLWH RYG+LS  GL+ L+ K MVRGLP+L++ S VC+DCM+GKQ
Sbjct: 437  --IPTCFKVTNEDVTYLWHCRYGYLSQKGLKILEQKNMVRGLPKLQDSSNVCSDCMIGKQ 494

Query: 1287 HRDAIPKRSLWRASQRLQLVHADICGPIKPISNSKKRYLISFIDDYSRKVWVYFLAEKSE 1466
            HR+   K S  RA++RLQL+HAD+ GPIKP SNS KRY ++FIDD+SRK WVYFL+EKS 
Sbjct: 495  HREPFLKVSTRRATKRLQLIHADVFGPIKPESNSNKRYFLTFIDDFSRKTWVYFLSEKSS 554

Query: 1467 AFMVF 1481
               +F
Sbjct: 555  VLEMF 559


>gb|PNX96091.1| retrotransposon-related protein [Trifolium pratense]
          Length = 1326

 Score =  588 bits (1515), Expect = 0.0
 Identities = 286/497 (57%), Positives = 365/497 (73%), Gaps = 4/497 (0%)
 Frame = +3

Query: 3    AGVELTEAQQKSIADQKLKDLKVKNYLFQAIDRNIMETILNKDTAKHIWDSMKQKYQGST 182
            +G   TE Q+K   + KLKDLK KNYLFQAIDR ++ TIL KDT+K IWD+MK+KY+G+ 
Sbjct: 48   SGTTQTEVQRKKNDEMKLKDLKAKNYLFQAIDRTVLNTILKKDTSKEIWDAMKKKYEGNE 107

Query: 183  RVKRAQLQALRKEFETLQMKEGESVDEYFARTLTIANKMKIHGENMKQVVIIEKILRSMA 362
            RVKR+ LQALR+EFE L+M+E E + EYF+R +T+ANKM+I+GENM  V ++EKILRS+ 
Sbjct: 108  RVKRSHLQALRREFEILEMREDEGMTEYFSRVMTVANKMRIYGENMPDVKVVEKILRSLT 167

Query: 363  ARFDYVVCSVEESNNLDTLTIDELQSSLLVHEQRMNGHREDEQALKATYDDRFVXXXXXX 542
             +F+Y+VCS+EES ++D+L+IDELQSSL VHEQ+      DEQALK TY+          
Sbjct: 168  EKFNYIVCSIEESKDIDSLSIDELQSSLTVHEQKFQRRNGDEQALKVTYE-----GGRGR 222

Query: 543  XXXXXXXXXXXXXXHTFNKATVECYNCHQLGHFQYECPKWEKGVNFAXXXXXXXXXXXSY 722
                            FNKAT+ECY CH+LGHF+YECP   +  N+            S+
Sbjct: 223  GRGAFRGRGRGRGRTNFNKATMECYQCHKLGHFRYECPD-NREANYV-ENDEEELLLMSF 280

Query: 723  VELNGSTDEDVWFLDSGCSNHMCGNKKWFSDFDEEFRQSVKLGNNSRMTVLGKGNIRLQI 902
            VEL  +  ED WFLDSGCSNHMCG++  FS+ DE FR SVKLGNN++M V+GKG+++  +
Sbjct: 281  VELYDAKREDAWFLDSGCSNHMCGDRTMFSELDENFRHSVKLGNNTKMNVVGKGSVKFLL 340

Query: 903  AGVTQVITDVFYIPELTNNLLSIGQLQERGVAILIQHGSCKVYHPEKGLIMQTTMSTNRM 1082
             G   ++T+V+YIPEL NNLLSIGQLQE+G+AILI+ G CK++HPEKGLI+QT MSTNRM
Sbjct: 341  NGTNFIVTEVYYIPELRNNLLSIGQLQEKGLAILIKGGMCKIFHPEKGLIIQTNMSTNRM 400

Query: 1083 FIL--LARVMPKAST--CFQITLEDNTYLWHRRYGHLSFNGLRTLQHKQMVRGLPQLKEP 1250
            F L   A+V P+A +  CF    +D ++LWHRRYGHLS+ GLRTL +K MVRGLPQ    
Sbjct: 401  FTLRSQAQVSPQAQSDQCFHTKAQDLSHLWHRRYGHLSYKGLRTLLYKNMVRGLPQFSIS 460

Query: 1251 SKVCTDCMVGKQHRDAIPKRSLWRASQRLQLVHADICGPIKPISNSKKRYLISFIDDYSR 1430
            S +CT+C+ GKQHRD IPK+S WRA+Q+L+L+HAD+CGPI P SNS KRY++ FIDDYSR
Sbjct: 461  SVICTNCINGKQHRDPIPKKSNWRATQKLELIHADVCGPISPSSNSNKRYILLFIDDYSR 520

Query: 1431 KVWVYFLAEKSEAFMVF 1481
            K WVYFL EKSEA   F
Sbjct: 521  KSWVYFLVEKSEALNSF 537


>gb|PRQ33299.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1363

 Score =  587 bits (1514), Expect = 0.0
 Identities = 284/502 (56%), Positives = 368/502 (73%), Gaps = 9/502 (1%)
 Frame = +3

Query: 3    AGVELTEAQQKSIADQKLKDLKVKNYLFQAIDRNIMETILNKDTAKHIWDSMKQKYQGST 182
            A  ELTEAQQ+ + + + KD K+KNYLFQAID  I+E IL K T+K IWDSMK+KY G+ 
Sbjct: 101  ARAELTEAQQRQLEEVEQKDQKIKNYLFQAIDMTILEQILEKRTSKDIWDSMKKKYAGNA 160

Query: 183  RVKRAQLQALRKEFETLQMKEGESVDEYFARTLTIANKMKIHGENMKQVVIIEKILRSMA 362
            RVKRA LQ+LR+++E ++MK GE++ EYFAR + ++NKM+ +GE+MK V ++EKILR++ 
Sbjct: 161  RVKRAALQSLRRDWEIMEMKVGETITEYFARVMNLSNKMRSNGEDMKDVTVVEKILRTLT 220

Query: 363  ARFDYVVCSVEESNNLDTLTIDELQSSLLVHEQRMN----GHREDEQALKATYDDRFVXX 530
             +++YVV S+EES ++D+LTIDELQSSL+VHEQ+ N    G   +E ALK T D+R    
Sbjct: 221  EKYNYVVVSIEESKDIDSLTIDELQSSLVVHEQKFNRNGSGSSGEEHALKVTIDERN-KG 279

Query: 531  XXXXXXXXXXXXXXXXXXHTFNKATVECYNCHQLGHFQYECPKWEKGVNFAXXXXXXXXX 710
                                F+KATVECY CH+LGHFQYECP W+K  N+A         
Sbjct: 280  GRGRGSFRGRGRGGGRGQRGFSKATVECYRCHKLGHFQYECPTWDKQANYAELDEQEEML 339

Query: 711  XXSYVELNGSTDEDVWFLDSGCSNHMCGNKKWFSDFDEEFRQSVKLGNNSRMTVLGKGNI 890
              +YVE  G++ E++WFLDSGCSNHMCGNK  F++ ++ F+ +V+LGNN+RM V GKGN+
Sbjct: 340  LMAYVENIGASREEIWFLDSGCSNHMCGNKVLFAELNKSFQHTVRLGNNTRMKVSGKGNV 399

Query: 891  RLQIAGVTQVITDVFYIPELTNNLLSIGQLQERGVAILIQHGSCKVYHPEKGLIMQTTMS 1070
            +L++ GV  VI DVFY+PEL NNLLSIGQLQERG+AILI +G CK+YHP+KGLI+Q+ M+
Sbjct: 400  KLEVNGVNCVIGDVFYVPELKNNLLSIGQLQERGLAILIHYGKCKIYHPQKGLIIQSEMT 459

Query: 1071 TNRMFILLARVMPKAS-----TCFQITLEDNTYLWHRRYGHLSFNGLRTLQHKQMVRGLP 1235
             NRMF+L+AR+ P  S      CF  T +D T+LWH R GH+S  GL+TLQ K+MV GLP
Sbjct: 460  ANRMFVLVARIEPTLSDSNQEICFNTTTQDLTHLWHCRLGHISNTGLQTLQRKKMVHGLP 519

Query: 1236 QLKEPSKVCTDCMVGKQHRDAIPKRSLWRASQRLQLVHADICGPIKPISNSKKRYLISFI 1415
            QL     VC DC+ GKQHR+ IPKRS WRA+QRL+L+HAD+CGPI PISNS K+Y++  I
Sbjct: 520  QLPALDVVCVDCLKGKQHREPIPKRSTWRATQRLELIHADLCGPISPISNSGKKYVLCLI 579

Query: 1416 DDYSRKVWVYFLAEKSEAFMVF 1481
            DDYSRK W YFL EKSE F VF
Sbjct: 580  DDYSRKAWSYFLNEKSETFAVF 601


>gb|PNX95763.1| retrotransposon-related protein, partial [Trifolium pratense]
          Length = 1327

 Score =  585 bits (1507), Expect = 0.0
 Identities = 275/494 (55%), Positives = 367/494 (74%), Gaps = 1/494 (0%)
 Frame = +3

Query: 3    AGVELTEAQQKSIADQKLKDLKVKNYLFQAIDRNIMETILNKDTAKHIWDSMKQKYQGST 182
            AGV   +A++K  AD KLKDLKVKNYLF AID+ I++TIL KDT+  +W+SM++KYQGS 
Sbjct: 47   AGVVENDAEKKERADLKLKDLKVKNYLFAAIDKTILKTILQKDTSAQLWESMRRKYQGSK 106

Query: 183  RVKRAQLQALRKEFETLQMKEGESVDEYFARTLTIANKMKIHGENMKQVVIIEKILRSMA 362
            RV+RAQLQALR+EFE L+MKEGE++ EYF+R +T+AN M+ +GE M+ + I+EKILR++ 
Sbjct: 107  RVQRAQLQALRREFEILEMKEGETIVEYFSRVMTVANNMRNNGEAMQDIQIVEKILRTLT 166

Query: 363  ARFDYVVCSVEESNNLDTLTIDELQSSLLVHEQRMNGH-REDEQALKATYDDRFVXXXXX 539
             RF+Y+V S+EES +++ L++DELQSSL+VHEQ+      E+EQ LK T ++R       
Sbjct: 167  ERFNYIVVSIEESKDINCLSVDELQSSLIVHEQKFRRRINEEEQVLKVTQEERSGRGRGR 226

Query: 540  XXXXXXXXXXXXXXXHTFNKATVECYNCHQLGHFQYECPKWEKGVNFAXXXXXXXXXXXS 719
                             + KA +EC+ CH+ GHFQYECP WE+  NFA           +
Sbjct: 227  STFGGYRGRGRGRSSPAY-KAAIECFKCHKKGHFQYECPDWEREANFAELEHEDELLLMA 285

Query: 720  YVELNGSTDEDVWFLDSGCSNHMCGNKKWFSDFDEEFRQSVKLGNNSRMTVLGKGNIRLQ 899
            YVE    T E++WFLDSGCSNHM GNK+WF+D +E+F+Q+VKLGN+SR+ V G G++RL 
Sbjct: 286  YVEEKKETREEIWFLDSGCSNHMSGNKEWFTDLNEDFKQTVKLGNDSRIAVTGIGSVRLW 345

Query: 900  IAGVTQVITDVFYIPELTNNLLSIGQLQERGVAILIQHGSCKVYHPEKGLIMQTTMSTNR 1079
            + G+ QVIT+V+YIPEL NNLLSIGQLQE+G+ +LIQ+G+CKV HP +G IM + MS NR
Sbjct: 346  VNGIVQVITNVYYIPELKNNLLSIGQLQEKGLTVLIQNGTCKVLHPSRGPIMHSDMSGNR 405

Query: 1080 MFILLARVMPKASTCFQITLEDNTYLWHRRYGHLSFNGLRTLQHKQMVRGLPQLKEPSKV 1259
            MF  LA+++     C Q+  +D + LWH R+GHL++ GLRTL ++ MV GLP +K P K+
Sbjct: 406  MFYFLAKMVSTLPKCMQVEADDESRLWHSRFGHLNYKGLRTLAYRGMVEGLPTVKTPQKL 465

Query: 1260 CTDCMVGKQHRDAIPKRSLWRASQRLQLVHADICGPIKPISNSKKRYLISFIDDYSRKVW 1439
            CT C+VGKQHRD IPKR+LWRA+ +LQLVH+DICGPI PISNS KRY++SFIDD++RK W
Sbjct: 466  CTHCLVGKQHRDPIPKRNLWRATHKLQLVHSDICGPISPISNSNKRYILSFIDDFTRKTW 525

Query: 1440 VYFLAEKSEAFMVF 1481
            +YFL +KSEA   F
Sbjct: 526  IYFLNQKSEALEAF 539


>gb|KYP37051.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1079

 Score =  569 bits (1466), Expect = 0.0
 Identities = 281/499 (56%), Positives = 355/499 (71%), Gaps = 7/499 (1%)
 Frame = +3

Query: 6    GVELTEAQQKSIADQKLKDLKVKNYLFQAIDRNIMETILNKDTAKHIWDSMKQKYQGSTR 185
            G   TEAQ++S+A+ +LKDLKVKN+LFQAIDR I+ET+L+K T++ IW SM+QKYQGS R
Sbjct: 24   GATPTEAQRRSVAEAQLKDLKVKNFLFQAIDREILETMLDKSTSQAIWRSMQQKYQGSMR 83

Query: 186  VKRAQLQALRKEFETLQMKEGESVDEYFARTLTIANKMKIHGENMKQVVIIEKILRSMAA 365
            VKRAQLQALR+EFE L MK+GE VD Y  RTL++ NKMK +GE M    ++ KILRS+  
Sbjct: 84   VKRAQLQALRREFELLAMKDGEKVDSYLGRTLSVVNKMKSNGEVMDSSTVVSKILRSLTT 143

Query: 366  RFDYVVCSVEESNNLDTLTIDELQSSLLVHEQRMNGHREDEQALKATYDDRFVXXXXXXX 545
            +F+YVVCS+EESN+L+TL++DEL  SLLVHEQRM   + +EQ LK T+DDR         
Sbjct: 144  KFNYVVCSIEESNDLNTLSLDELHGSLLVHEQRMQSSQPEEQVLKVTHDDR--EGAGRGR 201

Query: 546  XXXXXXXXXXXXXHTFNKATVECYNCHQLGHFQYECPKWEKGVNFA----XXXXXXXXXX 713
                           FNKA +EC+ CH+LGHFQYECP  EK  ++               
Sbjct: 202  GRGNRGRGRGRGRQPFNKALIECFQCHKLGHFQYECPGVEKRAHYTTFEEATEVEDEILL 261

Query: 714  XSYVELNGSTDEDVWFLDSGCSNHMCGNKKWFSDFDEE-FRQSVKLGNNSRMTVLGKGNI 890
             +Y E+      + WFLDSGCSNHM GNK WF++  EE   ++VKLGN++ + V  KGNI
Sbjct: 262  VAYEEVTHVVQMEDWFLDSGCSNHMTGNKLWFTEIHEEGLHKTVKLGNDTTLEVAAKGNI 321

Query: 891  RLQIAGVTQVITDVFYIPELTNNLLSIGQLQERGVAILIQHGSCKVYHPEKGLIMQTTMS 1070
            R+QI  +  VI+DV+Y+PEL  NLLS+GQLQE+G+ ILIQHG+CK++HP++GLI+ TTM 
Sbjct: 322  RVQINNIAHVISDVYYVPELKTNLLSLGQLQEKGLTILIQHGACKIFHPDRGLIIHTTMR 381

Query: 1071 TNRMFILLARVMPKASTCFQI--TLEDNTYLWHRRYGHLSFNGLRTLQHKQMVRGLPQLK 1244
             +RMF L A + P+ S CFQ+    E    LWHRR+GHL+F GL TL  +QMV GLP LK
Sbjct: 382  GDRMFYLSASMFPQHSRCFQVEDISEKEMQLWHRRFGHLNFRGLNTLAQEQMVIGLPSLK 441

Query: 1245 EPSKVCTDCMVGKQHRDAIPKRSLWRASQRLQLVHADICGPIKPISNSKKRYLISFIDDY 1424
              + VCT C+VGKQHRD IPK S WRAS +LQLVHA++CGPI P SNS KRY++SF+DDY
Sbjct: 442  ISTVVCTTCLVGKQHRDTIPKLSSWRASTKLQLVHANVCGPISPASNSGKRYILSFVDDY 501

Query: 1425 SRKVWVYFLAEKSEAFMVF 1481
            SRK WVYFL EKSE F  F
Sbjct: 502  SRKTWVYFLHEKSETFNTF 520