BLASTX nr result
ID: Rehmannia31_contig00027428
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia31_contig00027428
(369 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012833237.1| PREDICTED: pre-mRNA-splicing factor 18 [Eryt... 69 4e-11
gb|KZV17035.1| pre-mRNA-splicing factor 18 [Dorcoceras hygrometr... 64 2e-09
ref|XP_011082569.1| pre-mRNA-splicing factor 18 [Sesamum indicum] 64 3e-09
emb|CDP10312.1| unnamed protein product [Coffea canephora] 62 1e-08
gb|PIN14569.1| U5 snRNP-associated RNA splicing factor [Handroan... 59 2e-07
ref|XP_022890559.1| pre-mRNA-splicing factor 18-like [Olea europ... 58 3e-07
ref|XP_010277531.1| PREDICTED: pre-mRNA-splicing factor 18 [Nelu... 58 3e-07
gb|EPS60453.1| hypothetical protein M569_14349, partial [Genlise... 57 5e-07
ref|XP_022885799.1| pre-mRNA-splicing factor 18 [Olea europaea v... 55 3e-06
ref|XP_023769077.1| pre-mRNA-splicing factor 18 [Lactuca sativa]... 54 6e-06
ref|XP_019264588.1| PREDICTED: pre-mRNA-splicing factor 18 [Nico... 54 8e-06
ref|XP_016434101.1| PREDICTED: pre-mRNA-splicing factor 18-like ... 54 8e-06
ref|XP_009773364.1| PREDICTED: pre-mRNA-splicing factor 18 [Nico... 54 8e-06
>ref|XP_012833237.1| PREDICTED: pre-mRNA-splicing factor 18 [Erythranthe guttata]
gb|EYU40918.1| hypothetical protein MIMGU_mgv1a007137mg [Erythranthe guttata]
Length = 418
Score = 68.9 bits (167), Expect = 4e-11
Identities = 40/72 (55%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
Frame = +1
Query: 175 MDILKQELLKQRQILAEDVGGKKYFNRFXXXXXXXXXXXXXXNHEAEAKSLRHK------ 336
MDILKQEL K+R+ L EDVGGKKYF R EAEAKSLRHK
Sbjct: 1 MDILKQELQKKRESLKEDVGGKKYFKRSEIEQKRLQRLREEEKREAEAKSLRHKQLHQDQ 60
Query: 337 -QKNHPNSSSKP 369
QKN PNSSS P
Sbjct: 61 HQKNDPNSSSNP 72
>gb|KZV17035.1| pre-mRNA-splicing factor 18 [Dorcoceras hygrometricum]
Length = 417
Score = 63.9 bits (154), Expect = 2e-09
Identities = 37/71 (52%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Frame = +1
Query: 175 MDILKQELLKQRQILAEDVGGKKYFNRFXXXXXXXXXXXXXXNHEAEAKSLRHK------ 336
MDILKQEL+K+RQ LAEDVGGKK F R EAEAK+LRHK
Sbjct: 1 MDILKQELMKKRQSLAEDVGGKKIFKRSEIEQKRLQRLREEEKREAEAKALRHKKLQQQQ 60
Query: 337 QKNHPNSSSKP 369
Q N P+S+S P
Sbjct: 61 QNNDPDSTSGP 71
>ref|XP_011082569.1| pre-mRNA-splicing factor 18 [Sesamum indicum]
Length = 415
Score = 63.5 bits (153), Expect = 3e-09
Identities = 38/71 (53%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Frame = +1
Query: 175 MDILKQELLKQRQILAEDVGGKKYFNRFXXXXXXXXXXXXXXNHEAEAKSLRHK------ 336
MDILKQELLK+RQ LAEDVGGKK F R EAEAK+LR K
Sbjct: 1 MDILKQELLKKRQSLAEDVGGKKVFKRSEIEQKRLQRLREEEKREAEAKALRQKKLQQEQ 60
Query: 337 QKNHPNSSSKP 369
Q + PNSSS P
Sbjct: 61 QSDDPNSSSNP 71
>emb|CDP10312.1| unnamed protein product [Coffea canephora]
Length = 410
Score = 62.0 bits (149), Expect = 1e-08
Identities = 33/64 (51%), Positives = 38/64 (59%)
Frame = +1
Query: 175 MDILKQELLKQRQILAEDVGGKKYFNRFXXXXXXXXXXXXXXNHEAEAKSLRHKQKNHPN 354
MDILKQELLK+RQ LAE+ GGKK+F R EAEAK+LR KQ+ N
Sbjct: 1 MDILKQELLKKRQSLAEETGGKKFFKRSEIEQKRLQKLREEEKREAEAKALRQKQQKEQN 60
Query: 355 SSSK 366
SK
Sbjct: 61 EGSK 64
>gb|PIN14569.1| U5 snRNP-associated RNA splicing factor [Handroanthus
impetiginosus]
Length = 414
Score = 58.5 bits (140), Expect = 2e-07
Identities = 35/69 (50%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Frame = +1
Query: 175 MDILKQELLKQRQILAEDVGGKKYFNRFXXXXXXXXXXXXXXNHEAEAKSLRHKQ----- 339
MDILKQEL+K+RQ AEDVGGKK+F R EAEAK+LR KQ
Sbjct: 1 MDILKQELMKKRQSRAEDVGGKKFFKRSEIEQKRLQRLREEEKREAEAKALRQKQLQQDQ 60
Query: 340 -KNHPNSSS 363
N NSSS
Sbjct: 61 RNNESNSSS 69
>ref|XP_022890559.1| pre-mRNA-splicing factor 18-like [Olea europaea var. sylvestris]
Length = 287
Score = 57.8 bits (138), Expect = 3e-07
Identities = 31/62 (50%), Positives = 37/62 (59%)
Frame = +1
Query: 175 MDILKQELLKQRQILAEDVGGKKYFNRFXXXXXXXXXXXXXXNHEAEAKSLRHKQKNHPN 354
MDILKQELLK+RQ LAEDVGGKK+F R EAEAK+L+ K+
Sbjct: 1 MDILKQELLKKRQSLAEDVGGKKFFKRSEIEQKRLQRLREEEKREAEAKALKQKELEQKQ 60
Query: 355 SS 360
S+
Sbjct: 61 SN 62
>ref|XP_010277531.1| PREDICTED: pre-mRNA-splicing factor 18 [Nelumbo nucifera]
Length = 417
Score = 57.8 bits (138), Expect = 3e-07
Identities = 32/63 (50%), Positives = 38/63 (60%)
Frame = +1
Query: 175 MDILKQELLKQRQILAEDVGGKKYFNRFXXXXXXXXXXXXXXNHEAEAKSLRHKQKNHPN 354
MDIL+QELLK+R+ LAEDVGGKK F R E EAK+LR KQ N +
Sbjct: 1 MDILRQELLKKRKSLAEDVGGKKVFKRSEIEQKKLQKLREEEKRELEAKALRDKQHNSSS 60
Query: 355 SSS 363
+SS
Sbjct: 61 TSS 63
>gb|EPS60453.1| hypothetical protein M569_14349, partial [Genlisea aurea]
Length = 392
Score = 57.4 bits (137), Expect = 5e-07
Identities = 31/58 (53%), Positives = 35/58 (60%)
Frame = +1
Query: 175 MDILKQELLKQRQILAEDVGGKKYFNRFXXXXXXXXXXXXXXNHEAEAKSLRHKQKNH 348
MDILKQEL K+RQ LAEDVGGKK F R EAEAK+LR +Q +H
Sbjct: 1 MDILKQELEKKRQSLAEDVGGKKVFKRSEIEQKRILRLREEEKREAEAKALRQRQSHH 58
>ref|XP_022885799.1| pre-mRNA-splicing factor 18 [Olea europaea var. sylvestris]
Length = 445
Score = 55.1 bits (131), Expect = 3e-06
Identities = 30/62 (48%), Positives = 37/62 (59%)
Frame = +1
Query: 175 MDILKQELLKQRQILAEDVGGKKYFNRFXXXXXXXXXXXXXXNHEAEAKSLRHKQKNHPN 354
MDILKQELLK+RQ LAE+VGGKK+F R EAEAK+L+ K+
Sbjct: 27 MDILKQELLKKRQSLAENVGGKKFFKRSEIEQKRLQRLREEEKGEAEAKALKQKELEQKQ 86
Query: 355 SS 360
S+
Sbjct: 87 SN 88
>ref|XP_023769077.1| pre-mRNA-splicing factor 18 [Lactuca sativa]
gb|PLY81459.1| hypothetical protein LSAT_5X187781 [Lactuca sativa]
Length = 428
Score = 54.3 bits (129), Expect = 6e-06
Identities = 32/71 (45%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Frame = +1
Query: 175 MDILKQELLKQRQILAEDVGGKKYFNRFXXXXXXXXXXXXXXNHEAEAKSLRHKQKNH-- 348
MDILKQELLK+RQ L+E+ GG+K F R +AEAK LR Q +
Sbjct: 1 MDILKQELLKKRQSLSEETGGRKVFKRSEIEQRRIQKLREEEKRDAEAKRLRQDQNQNNS 60
Query: 349 ----PNSSSKP 369
PNSSS P
Sbjct: 61 NSSDPNSSSNP 71
>ref|XP_019264588.1| PREDICTED: pre-mRNA-splicing factor 18 [Nicotiana attenuata]
gb|OIT36312.1| hypothetical protein A4A49_24918 [Nicotiana attenuata]
Length = 413
Score = 53.9 bits (128), Expect = 8e-06
Identities = 30/55 (54%), Positives = 33/55 (60%)
Frame = +1
Query: 175 MDILKQELLKQRQILAEDVGGKKYFNRFXXXXXXXXXXXXXXNHEAEAKSLRHKQ 339
MDILKQEL K+RQ LA+DVGG+K F R EAEAKSLR KQ
Sbjct: 1 MDILKQELEKRRQSLAQDVGGRKVFKRSEIEQKRIQRIREEEKREAEAKSLRQKQ 55
>ref|XP_016434101.1| PREDICTED: pre-mRNA-splicing factor 18-like isoform X1 [Nicotiana
tabacum]
Length = 413
Score = 53.9 bits (128), Expect = 8e-06
Identities = 30/55 (54%), Positives = 33/55 (60%)
Frame = +1
Query: 175 MDILKQELLKQRQILAEDVGGKKYFNRFXXXXXXXXXXXXXXNHEAEAKSLRHKQ 339
MDILKQEL K+RQ LA+DVGG+K F R EAEAKSLR KQ
Sbjct: 1 MDILKQELEKRRQSLAQDVGGRKVFKRSEIEQKRLQRIREEEKREAEAKSLRQKQ 55
>ref|XP_009773364.1| PREDICTED: pre-mRNA-splicing factor 18 [Nicotiana sylvestris]
ref|XP_016466512.1| PREDICTED: pre-mRNA-splicing factor 18-like [Nicotiana tabacum]
ref|XP_016434102.1| PREDICTED: pre-mRNA-splicing factor 18-like isoform X2 [Nicotiana
tabacum]
Length = 413
Score = 53.9 bits (128), Expect = 8e-06
Identities = 30/55 (54%), Positives = 33/55 (60%)
Frame = +1
Query: 175 MDILKQELLKQRQILAEDVGGKKYFNRFXXXXXXXXXXXXXXNHEAEAKSLRHKQ 339
MDILKQEL K+RQ LA+DVGG+K F R EAEAKSLR KQ
Sbjct: 1 MDILKQELEKRRQSLAQDVGGRKVFKRSEIEQKRLQRIREEEKREAEAKSLRQKQ 55