BLASTX nr result
ID: Rehmannia31_contig00027390
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia31_contig00027390
(698 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012845534.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA... 375 e-120
ref|XP_011078257.1| probable RNA-dependent RNA polymerase 5 [Ses... 370 e-118
ref|XP_011081165.1| LOW QUALITY PROTEIN: probable RNA-dependent ... 339 e-112
gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza] 335 e-106
ref|XP_022893344.1| probable RNA-dependent RNA polymerase 5 isof... 334 e-105
ref|XP_022893343.1| probable RNA-dependent RNA polymerase 5 isof... 334 e-105
gb|KZV15097.1| putative RNA-dependent RNA polymerase 3 [Dorcocer... 325 e-104
ref|XP_020553693.1| probable RNA-dependent RNA polymerase 5 isof... 328 e-103
gb|PIN13666.1| RNA-directed RNA polymerase QDE-1 [Handroanthus i... 330 e-103
ref|XP_011093632.1| probable RNA-dependent RNA polymerase 5 isof... 328 e-102
gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Erythra... 318 1e-99
emb|CDP03267.1| unnamed protein product [Coffea canephora] 291 9e-89
emb|CDP03268.1| unnamed protein product [Coffea canephora] 288 2e-88
ref|XP_019191939.1| PREDICTED: probable RNA-dependent RNA polyme... 280 2e-84
ref|XP_015163796.1| PREDICTED: probable RNA-dependent RNA polyme... 271 2e-83
ref|XP_016454734.1| PREDICTED: probable RNA-dependent RNA polyme... 273 4e-83
ref|XP_015163793.1| PREDICTED: probable RNA-dependent RNA polyme... 271 1e-82
gb|OTF90821.1| putative RNA-dependent RNA polymerase, eukaryotic... 258 2e-82
ref|XP_019190390.1| PREDICTED: probable RNA-dependent RNA polyme... 274 4e-82
ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polyme... 271 7e-82
>ref|XP_012845534.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
5 [Erythranthe guttata]
Length = 1040
Score = 375 bits (964), Expect = e-120
Identities = 185/231 (80%), Positives = 200/231 (86%)
Frame = +3
Query: 3 RVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIPVSESFYLMG 182
RVASNH GLD+GF+AQRMI SGVPL+EPYLQLCLSNLE+GEKTKLK GKIP++ESFYLMG
Sbjct: 604 RVASNHAGLDYGFLAQRMICSGVPLDEPYLQLCLSNLENGEKTKLKTGKIPLNESFYLMG 663
Query: 183 TADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEMEEVVGNAKYG 362
TADPTGVLN DEVCVIL NGQISGKVLVYRNPGMHFGDVH+MEAVYVKE+EE VGNAKYG
Sbjct: 664 TADPTGVLNNDEVCVILGNGQISGKVLVYRNPGMHFGDVHVMEAVYVKELEEFVGNAKYG 723
Query: 363 IFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEF 542
+FFSTKG+ SAAYEMATGDFDGDMYWVSRNPELLKYFKA KPW R S P S+KKNP+EF
Sbjct: 724 VFFSTKGATSAAYEMATGDFDGDMYWVSRNPELLKYFKASKPWKRVLSAPDSKKKNPKEF 783
Query: 543 SDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHCATEKISL 695
SD AR+PSF+MATAADSWLT+MDRLL LGD EK SL
Sbjct: 784 SDXELENELFQLCLEARTPSFNMATAADSWLTFMDRLLTLGDDRTAEKKSL 834
>ref|XP_011078257.1| probable RNA-dependent RNA polymerase 5 [Sesamum indicum]
Length = 1036
Score = 370 bits (951), Expect = e-118
Identities = 184/233 (78%), Positives = 199/233 (85%), Gaps = 1/233 (0%)
Frame = +3
Query: 3 RVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIPVSESFYLMG 182
RVASN+DGL+ G VA+RMISSG+PL+EPYLQ CLS+LESGEK KLKQGKIPVSESFYLMG
Sbjct: 600 RVASNYDGLEVGVVARRMISSGIPLSEPYLQHCLSSLESGEKIKLKQGKIPVSESFYLMG 659
Query: 183 TADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEMEEVVGNAKYG 362
TADPTGVL EVCVILDNGQISGKVLVYRNPGMHFGDVH+MEAVY +E+EEVVGNAKYG
Sbjct: 660 TADPTGVLKNHEVCVILDNGQISGKVLVYRNPGMHFGDVHVMEAVYKEELEEVVGNAKYG 719
Query: 363 IFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEK-KNPQE 539
IFFSTKG RSAAYEMATGDFDGDMYWVSRNPELLKYFKA +PW R S P K +NP+E
Sbjct: 720 IFFSTKGKRSAAYEMATGDFDGDMYWVSRNPELLKYFKASEPWKRFYSTPADSKIRNPRE 779
Query: 540 FSDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHCATEKISLK 698
FSD AR PSFSMATAADSWLT+MDRLL LGD CA+EK+SLK
Sbjct: 780 FSDMELEHELFQLFQEAREPSFSMATAADSWLTFMDRLLTLGDDCASEKLSLK 832
>ref|XP_011081165.1| LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase 5
[Sesamum indicum]
Length = 488
Score = 339 bits (869), Expect = e-112
Identities = 172/232 (74%), Positives = 188/232 (81%), Gaps = 1/232 (0%)
Frame = +3
Query: 6 VASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIPVSESFYLMGT 185
VASN+DGL+ G V +RMISSG+PL+EPYLQ CLS+LESGEK KLKQGKIPVSESFYLMGT
Sbjct: 56 VASNYDGLEVGVVERRMISSGIPLSEPYLQHCLSSLESGEKIKLKQGKIPVSESFYLMGT 115
Query: 186 ADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEMEEVVGNAKYGI 365
ADPTGVL EVCVILDNGQISGKVLVYRNPGMHFGDVH+MEAVY +E+EEVVGNAKYGI
Sbjct: 116 ADPTGVLKNHEVCVILDNGQISGKVLVYRNPGMHFGDVHVMEAVYKEELEEVVGNAKYGI 175
Query: 366 FFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEK-KNPQEF 542
FFSTKG RSAAYEMATGDFDGDMYWVSRNPELLKYFKA +PW R S P K +NP+
Sbjct: 176 FFSTKGKRSAAYEMATGDFDGDMYWVSRNPELLKYFKASEPWKRFYSTPADSKIRNPRXM 235
Query: 543 SDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHCATEKISLK 698
AR S++ AADSWLT+MDRLL LGD CA+EK SLK
Sbjct: 236 E---LEHELFQLFQEARERRHSLSLAADSWLTFMDRLLTLGDDCASEKHSLK 284
>gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza]
Length = 898
Score = 335 bits (860), Expect = e-106
Identities = 162/232 (69%), Positives = 187/232 (80%)
Frame = +3
Query: 3 RVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIPVSESFYLMG 182
RVAS+HD D G +AQRMI G+PL+EPYLQ CLS LES +K KLK+G+IPV ES YLMG
Sbjct: 561 RVASHHDDWDLGLMAQRMICCGIPLDEPYLQHCLSKLESSQKKKLKEGRIPVDESCYLMG 620
Query: 183 TADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEMEEVVGNAKYG 362
TADPTGVL+ DEVCVILD+GQISGKVLVYRNPGMHFGD+H+MEAVYVK +EE +GNAKYG
Sbjct: 621 TADPTGVLHNDEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAVYVKGLEEFIGNAKYG 680
Query: 363 IFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEF 542
IFFSTKG RSAAYE+ATGDFDGD YWVSRNPELL +FKA +PW R P +EK++P++F
Sbjct: 681 IFFSTKGQRSAAYEIATGDFDGDTYWVSRNPELLTFFKASEPWKRVYPAPDAEKRDPRKF 740
Query: 543 SDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHCATEKISLK 698
S +R+PS++M TAADSWLTYMDRLL LGD A EK SLK
Sbjct: 741 SSSELERELFQLFLDSRTPSYNMGTAADSWLTYMDRLLTLGDDRAAEKNSLK 792
>ref|XP_022893344.1| probable RNA-dependent RNA polymerase 5 isoform X2 [Olea europaea
var. sylvestris]
Length = 896
Score = 334 bits (856), Expect = e-105
Identities = 159/232 (68%), Positives = 190/232 (81%)
Frame = +3
Query: 3 RVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIPVSESFYLMG 182
RVASNH+G+D GF+AQRM+SSG+PL+EPYLQ CLS L +K KLK G+IP+SESFY+MG
Sbjct: 459 RVASNHEGMDDGFMAQRMLSSGIPLSEPYLQQCLSRLVKDDKAKLKTGRIPISESFYVMG 518
Query: 183 TADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEMEEVVGNAKYG 362
TADPTG LN D+VCVIL++GQISGKVLVYRNPG+HFGD+HI++AVYV+E++EVVGNAKYG
Sbjct: 519 TADPTGRLNNDQVCVILESGQISGKVLVYRNPGLHFGDIHILDAVYVEELQEVVGNAKYG 578
Query: 363 IFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEF 542
IFFSTKG RSAAYE+ATGDFDGDMYWVSRNPELL YFKA +PW+R +S P S K NP E
Sbjct: 579 IFFSTKGGRSAAYEIATGDFDGDMYWVSRNPELLTYFKASEPWSRVHSTPDSHKINPLEL 638
Query: 543 SDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHCATEKISLK 698
S+ AR P++ MATAADSWLT MD+LL+L D A +K L+
Sbjct: 639 SEEELEREFFRLFSQARKPTYDMATAADSWLTNMDQLLMLSDDSAFKKDDLR 690
>ref|XP_022893343.1| probable RNA-dependent RNA polymerase 5 isoform X1 [Olea europaea
var. sylvestris]
Length = 897
Score = 334 bits (856), Expect = e-105
Identities = 159/232 (68%), Positives = 190/232 (81%)
Frame = +3
Query: 3 RVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIPVSESFYLMG 182
RVASNH+G+D GF+AQRM+SSG+PL+EPYLQ CLS L +K KLK G+IP+SESFY+MG
Sbjct: 460 RVASNHEGMDDGFMAQRMLSSGIPLSEPYLQQCLSRLVKDDKAKLKTGRIPISESFYVMG 519
Query: 183 TADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEMEEVVGNAKYG 362
TADPTG LN D+VCVIL++GQISGKVLVYRNPG+HFGD+HI++AVYV+E++EVVGNAKYG
Sbjct: 520 TADPTGRLNNDQVCVILESGQISGKVLVYRNPGLHFGDIHILDAVYVEELQEVVGNAKYG 579
Query: 363 IFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEF 542
IFFSTKG RSAAYE+ATGDFDGDMYWVSRNPELL YFKA +PW+R +S P S K NP E
Sbjct: 580 IFFSTKGGRSAAYEIATGDFDGDMYWVSRNPELLTYFKASEPWSRVHSTPDSHKINPLEL 639
Query: 543 SDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHCATEKISLK 698
S+ AR P++ MATAADSWLT MD+LL+L D A +K L+
Sbjct: 640 SEEELEREFFRLFSQARKPTYDMATAADSWLTNMDQLLMLSDDSAFKKDDLR 691
>gb|KZV15097.1| putative RNA-dependent RNA polymerase 3 [Dorcoceras hygrometricum]
Length = 675
Score = 325 bits (833), Expect = e-104
Identities = 154/232 (66%), Positives = 189/232 (81%)
Frame = +3
Query: 3 RVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIPVSESFYLMG 182
+VA+N++GL++GF+AQRMISSG+PLNEPYLQ CL +E EK+KLK GK+P+SE+FYLMG
Sbjct: 240 KVATNNNGLEYGFLAQRMISSGIPLNEPYLQHCLWKMEKDEKSKLKAGKLPISETFYLMG 299
Query: 183 TADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEMEEVVGNAKYG 362
TADPTG+LN DEVCVIL +GQ+SGKVLVYRNPG+HFGD+H+M+A+Y+KE+E +VGNAKYG
Sbjct: 300 TADPTGILNYDEVCVILHHGQVSGKVLVYRNPGLHFGDIHVMKAIYLKELEAIVGNAKYG 359
Query: 363 IFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEF 542
IFFSTKG SA YEMATGDFDGDMYWVSRNPELLKY++A PW RSN+ +S + PQEF
Sbjct: 360 IFFSTKGKSSAPYEMATGDFDGDMYWVSRNPELLKYYQASDPWRRSNAPQKSNNRKPQEF 419
Query: 543 SDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHCATEKISLK 698
S AR PSF +ATAADSWL++MDRLL + A+EK L+
Sbjct: 420 SAMELECELGRLFLEARKPSFIIATAADSWLSFMDRLLTI--QYASEKDRLR 469
>ref|XP_020553693.1| probable RNA-dependent RNA polymerase 5 isoform X2 [Sesamum indicum]
Length = 871
Score = 328 bits (840), Expect = e-103
Identities = 155/232 (66%), Positives = 183/232 (78%)
Frame = +3
Query: 3 RVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIPVSESFYLMG 182
RVASNHDGLDFG++AQ MIS G+PLNEPYL CL NL+ E+ KL++GK+PV ESFYLMG
Sbjct: 434 RVASNHDGLDFGYLAQLMISCGIPLNEPYLNHCLCNLKKDERAKLRKGKVPVGESFYLMG 493
Query: 183 TADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEMEEVVGNAKYG 362
TADPTGVL D+VCV+LDNGQISGKVLVYRNPG+HFGD+H+MEA+YV+++E+ +G++KYG
Sbjct: 494 TADPTGVLEYDQVCVVLDNGQISGKVLVYRNPGLHFGDIHVMEAIYVQQLEDYIGDSKYG 553
Query: 363 IFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEF 542
IFFSTKG RSA YEMATGDFDGDMYWVSR+ ELLK FKA +PW R S +S KNP+E
Sbjct: 554 IFFSTKGGRSAPYEMATGDFDGDMYWVSRHHELLKNFKASEPWARVYSTKESNSKNPKEL 613
Query: 543 SDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHCATEKISLK 698
S AR PSF M+TAADSWL +MDRLL LGD EK L+
Sbjct: 614 SSEELERELFRLFLQARKPSFEMSTAADSWLAFMDRLLTLGDDRTFEKDCLR 665
>gb|PIN13666.1| RNA-directed RNA polymerase QDE-1 [Handroanthus impetiginosus]
Length = 1014
Score = 330 bits (847), Expect = e-103
Identities = 160/233 (68%), Positives = 186/233 (79%), Gaps = 1/233 (0%)
Frame = +3
Query: 3 RVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIPVSESFYLMG 182
+VASN DGLD+GF AQ MIS G+PLNEPYLQ CL NL K+KLK+GKIP+SESFYLMG
Sbjct: 576 KVASNQDGLDYGFAAQIMISCGIPLNEPYLQHCLRNLRKDGKSKLKKGKIPISESFYLMG 635
Query: 183 TADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEMEEVVGNAKYG 362
TADPTGVL+ +VCVILDNGQ+SGKVLVYRNPG+HFGD+H+MEAVYVKE+EE VGN+KYG
Sbjct: 636 TADPTGVLDNGQVCVILDNGQLSGKVLVYRNPGLHFGDIHVMEAVYVKELEEYVGNSKYG 695
Query: 363 IFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQ-SEKKNPQE 539
IFFSTKGS+SAAYEMATGDFDGDMYW+SR+PELL++FK +PW RS S S + PQE
Sbjct: 696 IFFSTKGSKSAAYEMATGDFDGDMYWISRHPELLRHFKTSEPWRRSCSTTMPSNSRKPQE 755
Query: 540 FSDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHCATEKISLK 698
S AR PSF M +AA+SWL +MDRLL LGDH A+EK L+
Sbjct: 756 LSSEELEHELFRRYIEARRPSFDMPSAANSWLAFMDRLLTLGDHRASEKNCLR 808
>ref|XP_011093632.1| probable RNA-dependent RNA polymerase 5 isoform X1 [Sesamum indicum]
Length = 1013
Score = 328 bits (840), Expect = e-102
Identities = 155/232 (66%), Positives = 183/232 (78%)
Frame = +3
Query: 3 RVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIPVSESFYLMG 182
RVASNHDGLDFG++AQ MIS G+PLNEPYL CL NL+ E+ KL++GK+PV ESFYLMG
Sbjct: 576 RVASNHDGLDFGYLAQLMISCGIPLNEPYLNHCLCNLKKDERAKLRKGKVPVGESFYLMG 635
Query: 183 TADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEMEEVVGNAKYG 362
TADPTGVL D+VCV+LDNGQISGKVLVYRNPG+HFGD+H+MEA+YV+++E+ +G++KYG
Sbjct: 636 TADPTGVLEYDQVCVVLDNGQISGKVLVYRNPGLHFGDIHVMEAIYVQQLEDYIGDSKYG 695
Query: 363 IFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEF 542
IFFSTKG RSA YEMATGDFDGDMYWVSR+ ELLK FKA +PW R S +S KNP+E
Sbjct: 696 IFFSTKGGRSAPYEMATGDFDGDMYWVSRHHELLKNFKASEPWARVYSTKESNSKNPKEL 755
Query: 543 SDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHCATEKISLK 698
S AR PSF M+TAADSWL +MDRLL LGD EK L+
Sbjct: 756 SSEELERELFRLFLQARKPSFEMSTAADSWLAFMDRLLTLGDDRTFEKDCLR 807
>gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Erythranthe guttata]
Length = 878
Score = 318 bits (814), Expect = 1e-99
Identities = 165/231 (71%), Positives = 179/231 (77%)
Frame = +3
Query: 3 RVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIPVSESFYLMG 182
RVASNH GLD+GF+AQRMI SGVPL+EPYLQLCLSNLE+GEKTKLK GKIP++ESFYLMG
Sbjct: 469 RVASNHAGLDYGFLAQRMICSGVPLDEPYLQLCLSNLENGEKTKLKTGKIPLNESFYLMG 528
Query: 183 TADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEMEEVVGNAKYG 362
TADPTGVLN DEVCVIL NGQISGKVLVYRNPGMHFGDVH+MEAVYVKE+EE VGNAKYG
Sbjct: 529 TADPTGVLNNDEVCVILGNGQISGKVLVYRNPGMHFGDVHVMEAVYVKELEEFVGNAKYG 588
Query: 363 IFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEF 542
+FFSTKG+ SAAYEMATGDFDGDMYWVSRNPEL N + Q
Sbjct: 589 VFFSTKGATSAAYEMATGDFDGDMYWVSRNPEL------------ENELFQ--------- 627
Query: 543 SDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHCATEKISL 695
AR+PSF+MATAADSWLT+MDRLL LGD EK SL
Sbjct: 628 -----------LCLEARTPSFNMATAADSWLTFMDRLLTLGDDRTAEKKSL 667
>emb|CDP03267.1| unnamed protein product [Coffea canephora]
Length = 1019
Score = 291 bits (746), Expect = 9e-89
Identities = 142/232 (61%), Positives = 177/232 (76%)
Frame = +3
Query: 3 RVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIPVSESFYLMG 182
+VA + +G A R++ +G+PLNEP+LQ LS L + E+T LK+GKIP+SESFYLMG
Sbjct: 590 KVALHQEGFYDAGGALRLLLAGIPLNEPHLQKRLSELANNERTLLKEGKIPISESFYLMG 649
Query: 183 TADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEMEEVVGNAKYG 362
TADPTG+L +EVCV+LDNGQ+SGKVL+YRNPG+HFGDVH++EAVYV +E+++GNAKYG
Sbjct: 650 TADPTGLLKENEVCVVLDNGQVSGKVLLYRNPGLHFGDVHVLEAVYVPALEDIIGNAKYG 709
Query: 363 IFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEF 542
IFFSTKG RS A E+A GDFDGDMYWVSRNP+LLKYF A PWTR ++E+KNP E+
Sbjct: 710 IFFSTKGRRSVASEIANGDFDGDMYWVSRNPQLLKYFSASPPWTRVYPSLRAERKNPNEY 769
Query: 543 SDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHCATEKISLK 698
S + PS++MA AADSWL +MDRLLILGD A EK +LK
Sbjct: 770 S--AEQLEHELFRHFLKKPSYNMAVAADSWLAFMDRLLILGDDNAKEKDALK 819
>emb|CDP03268.1| unnamed protein product [Coffea canephora]
Length = 875
Score = 288 bits (738), Expect = 2e-88
Identities = 139/232 (59%), Positives = 175/232 (75%)
Frame = +3
Query: 3 RVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIPVSESFYLMG 182
+V+ + +D G+ RMI +GVPL+EP+LQ L+ L + E+ LK+GK+P+SESFY+MG
Sbjct: 438 KVSIRNGDMDDGWTTARMILAGVPLSEPHLQDRLAKLANFERKSLKEGKLPISESFYVMG 497
Query: 183 TADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEMEEVVGNAKYG 362
TADPTG+L +EVCVIL+NGQISGKVLVYRNPG+HFGDVH++EAVYVKE+E+V+GNAK+G
Sbjct: 498 TADPTGLLKANEVCVILENGQISGKVLVYRNPGLHFGDVHVLEAVYVKELEDVIGNAKFG 557
Query: 363 IFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEF 542
IFFSTKG RS A E+A GDFDGDMYWVSRNP+LLKYF+A +PWTR S P +E K P +F
Sbjct: 558 IFFSTKGQRSVANEIANGDFDGDMYWVSRNPQLLKYFRASEPWTRVYSSPPAENKKPSDF 617
Query: 543 SDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHCATEKISLK 698
S R SF+MA AA SWL +MDRLL+L D A + L+
Sbjct: 618 SAEALEYELFRLSLEKRKQSFNMAVAAHSWLAFMDRLLVLRDENAGDTDGLR 669
>ref|XP_019191939.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Ipomoea nil]
Length = 1062
Score = 280 bits (717), Expect = 2e-84
Identities = 137/233 (58%), Positives = 175/233 (75%), Gaps = 2/233 (0%)
Frame = +3
Query: 3 RVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIPVSESFYLMG 182
+ A N++ LD+G +A+ MI SGVPL+EPYLQ C+S+ + EK LK+GKIP+S+SFYL+G
Sbjct: 621 KAACNYEDLDYGSIAKSMILSGVPLSEPYLQCCISSATNAEKRLLKEGKIPISDSFYLIG 680
Query: 183 TADPT--GVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEMEEVVGNAK 356
TADPT GVLN D+VCVILD GQI+G+VLVYRNPG+HFGD+H + AVYVKE++E+VGNAK
Sbjct: 681 TADPTENGVLNRDQVCVILDYGQIAGEVLVYRNPGLHFGDIHKLTAVYVKEIDEIVGNAK 740
Query: 357 YGIFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQ 536
Y IFFSTKG RS A E+A GDFDGD+YWVSRN +L++ F+A PW R S P+ + P
Sbjct: 741 YAIFFSTKGERSVASEIANGDFDGDVYWVSRNSKLIENFRASCPWKRLFSTPKPLIRKPN 800
Query: 537 EFSDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHCATEKISL 695
E S R PS+SM+TAADSWL MDRLL LGD+C +E +++
Sbjct: 801 EISPEELEHTLFQMFLETRRPSYSMSTAADSWLALMDRLL-LGDNCHSEMVAI 852
>ref|XP_015163796.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3
[Solanum tuberosum]
Length = 705
Score = 271 bits (694), Expect = 2e-83
Identities = 134/232 (57%), Positives = 171/232 (73%)
Frame = +3
Query: 3 RVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIPVSESFYLMG 182
+V N+ +D + RMISSG+PLNEP+L+ LS L E+TKL+ GK+P+S+SFYLMG
Sbjct: 374 KVVINYREMDDDCLTARMISSGIPLNEPHLRARLSRLAKIERTKLRGGKLPISDSFYLMG 433
Query: 183 TADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEMEEVVGNAKYG 362
TADPTGVL ++EVCVILDNGQISG+VLVYRNPG+HFGDVH+M+A YV+E+ +VVG+AKYG
Sbjct: 434 TADPTGVLESNEVCVILDNGQISGRVLVYRNPGLHFGDVHVMKARYVEELADVVGDAKYG 493
Query: 363 IFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEF 542
IFFSTKG RSAA E+A GDFDGDMYWVS N +++ + +PW+R +S P++ K P EF
Sbjct: 494 IFFSTKGPRSAATEIANGDFDGDMYWVSINRKVVDSYTTSRPWSRMHSTPKAVSKKPSEF 553
Query: 543 SDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHCATEKISLK 698
S A+S +M+ AADSWL +MDRLL+L D E SLK
Sbjct: 554 SADKLEYELFRQFLEAKSKGANMSVAADSWLAFMDRLLMLRDDNVDEMHSLK 605
>ref|XP_016454734.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3
[Nicotiana tabacum]
Length = 813
Score = 273 bits (698), Expect = 4e-83
Identities = 137/232 (59%), Positives = 173/232 (74%)
Frame = +3
Query: 3 RVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIPVSESFYLMG 182
+VA N+ +D +A RMISSGVPLNEP+L LS L E++KL+ GK+P+S+SFYLMG
Sbjct: 380 KVAINYREMDDDCLAARMISSGVPLNEPHLHARLSRLAKIERSKLRGGKLPLSDSFYLMG 439
Query: 183 TADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEMEEVVGNAKYG 362
TADPTGVL +EVCVILD+GQ+SG+VLVYRNPG+HFGDVH+M+A YV+E+ ++VG+AKYG
Sbjct: 440 TADPTGVLENNEVCVILDSGQVSGRVLVYRNPGLHFGDVHVMKARYVEELVDIVGDAKYG 499
Query: 363 IFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEF 542
I FSTKG RSAA E+A GDFDGDMYWVS N +L+ ++A KPWTR++S P++ K P EF
Sbjct: 500 IVFSTKGPRSAASEIANGDFDGDMYWVSINRKLVDSYRASKPWTRTHSTPKAVSKKPTEF 559
Query: 543 SDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHCATEKISLK 698
S A+S SM+ AADSWL +MDRLL+L D A SLK
Sbjct: 560 SADELEYELFRQFLRAKSKGASMSVAADSWLAFMDRLLMLRDDDADGMHSLK 611
>ref|XP_015163793.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
[Solanum tuberosum]
Length = 812
Score = 271 bits (694), Expect = 1e-82
Identities = 134/232 (57%), Positives = 171/232 (73%)
Frame = +3
Query: 3 RVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIPVSESFYLMG 182
+V N+ +D + RMISSG+PLNEP+L+ LS L E+TKL+ GK+P+S+SFYLMG
Sbjct: 580 KVVINYREMDDDCLTARMISSGIPLNEPHLRARLSRLAKIERTKLRGGKLPISDSFYLMG 639
Query: 183 TADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEMEEVVGNAKYG 362
TADPTGVL ++EVCVILDNGQISG+VLVYRNPG+HFGDVH+M+A YV+E+ +VVG+AKYG
Sbjct: 640 TADPTGVLESNEVCVILDNGQISGRVLVYRNPGLHFGDVHVMKARYVEELADVVGDAKYG 699
Query: 363 IFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEF 542
IFFSTKG RSAA E+A GDFDGDMYWVS N +++ + +PW+R +S P++ K P EF
Sbjct: 700 IFFSTKGPRSAATEIANGDFDGDMYWVSINRKVVDSYTTSRPWSRMHSTPKAVSKKPSEF 759
Query: 543 SDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHCATEKISLK 698
S A+S +M+ AADSWL +MDRLL+L D E SLK
Sbjct: 760 SADKLEYELFRQFLEAKSKGANMSVAADSWLAFMDRLLMLRDDNVDEMHSLK 811
>gb|OTF90821.1| putative RNA-dependent RNA polymerase, eukaryotic-type [Helianthus
annuus]
Length = 346
Score = 258 bits (660), Expect = 2e-82
Identities = 129/215 (60%), Positives = 151/215 (70%)
Frame = +3
Query: 54 MISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIPVSESFYLMGTADPTGVLNTDEVCVIL 233
MI SGVPL EPYLQ LS L + E+ L+ G+IPV+ES+YL+GTADPTG LN DEVCVIL
Sbjct: 1 MIGSGVPLEEPYLQYRLSILANEERKGLRAGRIPVNESYYLIGTADPTGTLNNDEVCVIL 60
Query: 234 DNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEMEEVVGNAKYGIFFSTKGSRSAAYEMAT 413
+NGQISGKVLVYRNPG+ FGDVHI+ A YV++MEE VGNAKYGIFFSTKG RS E+A
Sbjct: 61 ENGQISGKVLVYRNPGLDFGDVHILTAKYVEKMEEFVGNAKYGIFFSTKGKRSVGTEIAN 120
Query: 414 GDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEFSDXXXXXXXXXXXXXAR 593
GDFDGD+YWV RNP+LL YFKA +PW R S P K P E S +
Sbjct: 121 GDFDGDLYWVCRNPQLLHYFKASEPWKRKYSTPSKPSKKPGELSYDELETEIFSLLFATQ 180
Query: 594 SPSFSMATAADSWLTYMDRLLILGDHCATEKISLK 698
S TAADSW+ YMD+ L LG++ EK +K
Sbjct: 181 KHSKVAGTAADSWMAYMDQYLSLGENDVDEKRRIK 215
>ref|XP_019190390.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Ipomoea nil]
Length = 1026
Score = 274 bits (700), Expect = 4e-82
Identities = 129/228 (56%), Positives = 163/228 (71%)
Frame = +3
Query: 3 RVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIPVSESFYLMG 182
R A H +D F ++ISSGVP++EPYLQ CLS L + EK LK GK+P S+S+YLMG
Sbjct: 589 RAAVRHGEIDNEFTTAKLISSGVPMDEPYLQGCLSRLSNMEKDNLKTGKLPTSDSYYLMG 648
Query: 183 TADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEMEEVVGNAKYG 362
T DPTG LN+DEVCVILDNG ++GKVLVY++PG+HFGD+HIM A YV+E+ +VGNAKYG
Sbjct: 649 TVDPTGTLNSDEVCVILDNGHVTGKVLVYKHPGLHFGDIHIMNAKYVEELNHIVGNAKYG 708
Query: 363 IFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEF 542
IFFSTKG SAA E+A DFDGDMYWVS NP+LL Y+KA +PW+R ++VP++ K P +F
Sbjct: 709 IFFSTKGPISAASEIANSDFDGDMYWVSMNPQLLSYYKASEPWSRIHAVPKAVTKRPSDF 768
Query: 543 SDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHCATEK 686
+ +MA AAD WL MD+ L LG++CA EK
Sbjct: 769 MPDELEYELLRVFLEGKKSGNNMAVAADYWLACMDQFLTLGNNCAKEK 816
>ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
[Solanum tuberosum]
Length = 911
Score = 271 bits (694), Expect = 7e-82
Identities = 134/232 (57%), Positives = 171/232 (73%)
Frame = +3
Query: 3 RVASNHDGLDFGFVAQRMISSGVPLNEPYLQLCLSNLESGEKTKLKQGKIPVSESFYLMG 182
+V N+ +D + RMISSG+PLNEP+L+ LS L E+TKL+ GK+P+S+SFYLMG
Sbjct: 580 KVVINYREMDDDCLTARMISSGIPLNEPHLRARLSRLAKIERTKLRGGKLPISDSFYLMG 639
Query: 183 TADPTGVLNTDEVCVILDNGQISGKVLVYRNPGMHFGDVHIMEAVYVKEMEEVVGNAKYG 362
TADPTGVL ++EVCVILDNGQISG+VLVYRNPG+HFGDVH+M+A YV+E+ +VVG+AKYG
Sbjct: 640 TADPTGVLESNEVCVILDNGQISGRVLVYRNPGLHFGDVHVMKARYVEELADVVGDAKYG 699
Query: 363 IFFSTKGSRSAAYEMATGDFDGDMYWVSRNPELLKYFKAHKPWTRSNSVPQSEKKNPQEF 542
IFFSTKG RSAA E+A GDFDGDMYWVS N +++ + +PW+R +S P++ K P EF
Sbjct: 700 IFFSTKGPRSAATEIANGDFDGDMYWVSINRKVVDSYTTSRPWSRMHSTPKAVSKKPSEF 759
Query: 543 SDXXXXXXXXXXXXXARSPSFSMATAADSWLTYMDRLLILGDHCATEKISLK 698
S A+S +M+ AADSWL +MDRLL+L D E SLK
Sbjct: 760 SADKLEYELFRQFLEAKSKGANMSVAADSWLAFMDRLLMLRDDNVDEMHSLK 811