BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00027237
         (512 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV32484.1| hypothetical protein F511_27231 [Dorcoceras hygro...    69   4e-11
ref|YP_002519387.1| putative enzymatic polyprotein [Rudbeckia fl...    61   9e-08
ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus] >...    58   1e-06
ref|YP_006732334.1| polyprotein [Dahlia mosaic virus] >gi|323511...    58   1e-06
emb|CAD56758.1| putative reverse transcriptase, partial [Dahlia ...    57   2e-06
dbj|BAS06276.1| polymerase polyprotein [Dahlia common mosaic virus]    57   2e-06
gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus]     57   2e-06
gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland]     57   2e-06

>gb|KZV32484.1| hypothetical protein F511_27231 [Dorcoceras hygrometricum]
          Length = 215

 Score = 68.9 bits (167), Expect = 4e-11
 Identities = 38/81 (46%), Positives = 48/81 (59%)
 Frame = +2

Query: 29  IS*GT*TLGKITKRNGVHSG**KIQNQMTTSPFSIYISIGMLXXXXXXXXXXXXIDSGAG 208
           +S GT  L    +RNG+H G   +++ M+TSPFSIYI + ML            I SGAG
Sbjct: 51  VSGGTQALETTWERNGIHDGRSYLEDSMSTSPFSIYIPVRMLYEQYKAEYFAAYIGSGAG 110

Query: 209 ICTAKPDVFPKEIGEDLPAIA 271
           ICTAK  V PKE+ +DL  IA
Sbjct: 111 ICTAKRGVVPKELEDDLTQIA 131


>ref|YP_002519387.1| putative enzymatic polyprotein [Rudbeckia flower distortion virus]
 gb|ACL36982.1| putative enzymatic polyprotein [Rudbeckia flower distortion virus]
          Length = 701

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
 Frame = +2

Query: 116 TSPFSIYISIGMLXXXXXXXXXXXXIDSGAGICTAKPDVFPKEIGEDLP----AIAGRDF 283
           T+P+S Y+++G              +D+GA  CTA P + P E+ E+LP         D 
Sbjct: 23  TNPYSTYVTVGFYFNGYKGFHLHAYVDTGATSCTASPHIIPTELWEELPKPILVNIANDT 82

Query: 284 SKRILILNRGIKQAEIMIGGAGGTPWYKVKTPPIYFHDTGADILLGNNFLQTFKRFTQE 460
           +  I  + R +K +     G   T       P +Y  +TG D + G NFL+ ++ FTQ+
Sbjct: 83  NIEIRYVTRNLKVSMTDTNGNKHT----FIIPTVYQQNTGMDFIFGQNFLKLYRPFTQD 137


>ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus]
 gb|AAM53128.1| ORFV [Mirabilis mosaic virus]
          Length = 674

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
 Frame = +2

Query: 116 TSPFSIYISIGMLXXXXXXXXXXXXIDSGAGICTAKPDVFPKEIGEDLP-AIAGRDFSKR 292
           T+P SIYI   +             +D+GA +C A   V P +  E+ P +I  +  ++ 
Sbjct: 24  TNPNSIYIEAKVKFKGYQTLSLHCYVDTGASLCLASKHVIPDDFWENAPRSIPVKIANQS 83

Query: 293 ILILNRGIKQAEIMIGGAGGTPWYKVKTPPIYFHDTGADILLGNNFLQTFKRFTQ 457
            + LN+  +  +I I G       +   P IY  +TG DILLGNNF QT++ F Q
Sbjct: 84  SITLNKVCRGLKINIAGN------EFFIPTIYQQETGIDILLGNNFCQTYQPFIQ 132


>ref|YP_006732334.1| polyprotein [Dahlia mosaic virus]
 gb|AAP75615.1| polyprotein [Dahlia mosaic virus]
 gb|AFR69283.1| polyprotein [Dahlia mosaic virus]
          Length = 609

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 39/115 (33%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
 Frame = +2

Query: 116 TSPFSIYISIGMLXXXXXXXXXXXXIDSGAGICTAKPDVFPKEIGEDLP-AIAGRDFSKR 292
           TSP SIYI   +             +D+GAG+C A   V P E+ E+ P  I     ++ 
Sbjct: 50  TSPNSIYIKAKLSFKGYKKFDLHCYVDTGAGLCLASKHVIPDELWENAPRTIEVTVANQE 109

Query: 293 ILILNRGIKQAEIMIGGAGGTPWYKVKTPPIYFHDTGADILLGNNFLQTFKRFTQ 457
            + +N+  K   + I G       +   P IY  +TG DILLGNNF Q +  F Q
Sbjct: 110 KVQINKVCKNLILQIVGE------EFVIPTIYQQETGIDILLGNNFCQLYNPFIQ 158


>emb|CAD56758.1| putative reverse transcriptase, partial [Dahlia mosaic virus]
          Length = 337

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
 Frame = +2

Query: 116 TSPFSIYISIGMLXXXXXXXXXXXXIDSGAGICTAKPDVFPKEIGEDLP-AIAGRDFSKR 292
           TSP SIYI   +             +D+GAG+C A   + P+E+ E+ P  I     ++ 
Sbjct: 28  TSPNSIYIEGKLSFKGYKMINIHCYVDTGAGLCLASKYIIPEELWENSPNTIQVTVANQE 87

Query: 293 ILILNRGIKQAEIMIGGAGGTPWYKVKTPPIYFHDTGADILLGNNFLQTFKRFTQ 457
            + L +  K   I I G       K   P IY  +TG DIL+GNNF + +  F Q
Sbjct: 88  KVYLTKVCKNLNIYIAGE------KFTIPTIYQQETGIDILIGNNFCRLYNPFIQ 136


>dbj|BAS06276.1| polymerase polyprotein [Dahlia common mosaic virus]
          Length = 672

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
 Frame = +2

Query: 116 TSPFSIYISIGMLXXXXXXXXXXXXIDSGAGICTAKPDVFPKEIGEDLP-AIAGRDFSKR 292
           TSP SIYI   +             +D+GAG+C A   + P+E+ E+ P  I     ++ 
Sbjct: 28  TSPNSIYIEGKLSFKGYKMINIHCYVDTGAGLCLASKYIIPEELWENSPNTIQVTVANQE 87

Query: 293 ILILNRGIKQAEIMIGGAGGTPWYKVKTPPIYFHDTGADILLGNNFLQTFKRFTQ 457
            + L +  K   I I G       K   P IY  +TG DIL+GNNF + +  F Q
Sbjct: 88  KVYLTKVCKNLNIYIAGE------KFTIPTIYQQETGIDILIGNNFCRLYNPFIQ 136


>gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus]
          Length = 673

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
 Frame = +2

Query: 116 TSPFSIYISIGMLXXXXXXXXXXXXIDSGAGICTAKPDVFPKEIGEDLP-AIAGRDFSKR 292
           TSP SIYI   +             +D+GAG+C A   + P+E+ E+ P  I     ++ 
Sbjct: 28  TSPNSIYIEGKLSFKGYKMINIHCYVDTGAGLCLASKYIIPEELWENSPNTIQVTVANQE 87

Query: 293 ILILNRGIKQAEIMIGGAGGTPWYKVKTPPIYFHDTGADILLGNNFLQTFKRFTQ 457
            + L +  K   I I G       K   P IY  +TG DIL+GNNF + +  F Q
Sbjct: 88  KVYLTKVCKNLNIYIAGE------KFTIPTIYQQETGIDILIGNNFCRLYNPFIQ 136


>gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland]
          Length = 673

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
 Frame = +2

Query: 116 TSPFSIYISIGMLXXXXXXXXXXXXIDSGAGICTAKPDVFPKEIGEDLP-AIAGRDFSKR 292
           TSP SIYI   +             +D+GAG+C A   + P+E+ E+ P  I     ++ 
Sbjct: 28  TSPNSIYIEGKLSFKGYKMINIHCYVDTGAGLCLASKYIIPEELWENSPNTIQVTVANQE 87

Query: 293 ILILNRGIKQAEIMIGGAGGTPWYKVKTPPIYFHDTGADILLGNNFLQTFKRFTQ 457
            + L +  K   I I G       K   P IY  +TG DIL+GNNF + +  F Q
Sbjct: 88  KVYLTKVCKNLNIYIAGE------KFTIPTIYQQETGIDILIGNNFCRLYNPFIQ 136