BLASTX nr result

ID: Rehmannia31_contig00026860 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00026860
         (352 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011086521.1| DEAD-box ATP-dependent RNA helicase 21 [Sesa...    59   9e-08
gb|PIN13293.1| U5 snRNP-like RNA helicase subunit [Handroanthus ...    59   1e-07

>ref|XP_011086521.1| DEAD-box ATP-dependent RNA helicase 21 [Sesamum indicum]
          Length = 720

 Score = 59.3 bits (142), Expect = 9e-08
 Identities = 34/54 (62%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
 Frame = +1

Query: 112 MKRAADDVVD---GAKKPVFLTKXXXXXXXXXXXXXXVAQQKRRTELLLQANNG 264
           MKRA++DVVD   GAKKPVFLTK              VAQQKRR ELLLQANNG
Sbjct: 1   MKRASEDVVDKVDGAKKPVFLTKEERQKLALQRRQEEVAQQKRRAELLLQANNG 54


>gb|PIN13293.1| U5 snRNP-like RNA helicase subunit [Handroanthus impetiginosus]
          Length = 722

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 34/54 (62%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
 Frame = +1

Query: 112 MKRAADDVV---DGAKKPVFLTKXXXXXXXXXXXXXXVAQQKRRTELLLQANNG 264
           MKRA+DDVV   DGAKKPVFLTK              VAQQKRR ELLLQA+NG
Sbjct: 1   MKRASDDVVEKLDGAKKPVFLTKEERQKLALQRREEEVAQQKRRAELLLQASNG 54


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