BLASTX nr result

ID: Rehmannia31_contig00026858 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00026858
         (453 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_019189679.1| PREDICTED: uncharacterized protein LOC109184...    52   7e-06

>ref|XP_019189679.1| PREDICTED: uncharacterized protein LOC109184093 [Ipomoea nil]
          Length = 284

 Score = 51.6 bits (122), Expect(2) = 7e-06
 Identities = 20/40 (50%), Positives = 31/40 (77%)
 Frame = +2

Query: 197 RNNRVTCTLWEEYVDQILPFLEEGKFEPIVVILQMCRAKV 316
           R +R+T TLWEE+VD +LP+      +P++VILQ+CRA++
Sbjct: 78  RGSRLTITLWEEHVDSVLPYYNADLTDPLIVILQLCRARL 117



 Score = 25.8 bits (55), Expect(2) = 7e-06
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 3   CFMFIDIISRIVSMHSAKTTEITGRTTR 86
           C   ID+I R+VS+   KT ++  +  R
Sbjct: 41  CNQLIDLIGRVVSITEPKTIQVNSKPQR 68


Top