BLASTX nr result

ID: Rehmannia31_contig00026835 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00026835
         (682 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023732960.1| uncharacterized protein LOC111880780 [Lactuc...    49   3e-09

>ref|XP_023732960.1| uncharacterized protein LOC111880780 [Lactuca sativa]
          Length = 259

 Score = 49.3 bits (116), Expect(2) = 3e-09
 Identities = 43/145 (29%), Positives = 59/145 (40%), Gaps = 36/145 (24%)
 Frame = -1

Query: 622 SNPQLSLVPSHFRYTSIQITKHRLNGGNFQEWYHW**RAEARPVTTSTI*SETSDYINWD 443
           SNP  SL P      S+QIT+H+LNG NF+EW+            T  +  ET      D
Sbjct: 8   SNPNSSLFPPSDINPSLQITQHKLNGLNFREWFQSVLLVIRGKGKTGYLTGETEAPNKKD 67

Query: 442 -----WETGNSRVTA------------------------RMIYKMEAKLE*L*PCY---- 362
                WE  NS V A                        + + +M + LE    C+    
Sbjct: 68  AHYKIWEAENSIVMAWLVNSMNPNIGRTYLYYNTAHEIWKAVQEMYSDLENTSQCFEIRS 127

Query: 361 ---TTRESTASIT*YFNTLSELWQE 296
              +T +   S+T Y+N L+ELWQE
Sbjct: 128 ALRSTNQGGRSVTEYYNVLTELWQE 152



 Score = 40.4 bits (93), Expect(2) = 3e-09
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = -3

Query: 290 FHVVWKCHDDRVE*SKMLKKDRIFNFLQDLN 198
           +H+ W C  D    +KML+KDRIF+FLQ LN
Sbjct: 157 YHINWSCPQDGTLHAKMLEKDRIFDFLQGLN 187


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