BLASTX nr result

ID: Rehmannia31_contig00026317 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00026317
         (426 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011096615.1| DEAD-box ATP-dependent RNA helicase 1 isofor...    57   1e-06
ref|XP_011096614.1| DEAD-box ATP-dependent RNA helicase 1 isofor...    57   1e-06

>ref|XP_011096615.1| DEAD-box ATP-dependent RNA helicase 1 isoform X2 [Sesamum indicum]
          Length = 561

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 31/45 (68%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
 Frame = -1

Query: 426 ESFHSMYKTALERLKESVESEKYRKG--KVNTKRPGVTRKKENTA 298
           ESF S+Y  ALERLKESVESEK  KG  KVN K P VTRKKE  +
Sbjct: 507 ESFRSVYSRALERLKESVESEKRSKGKVKVNIKHPAVTRKKEKAS 551


>ref|XP_011096614.1| DEAD-box ATP-dependent RNA helicase 1 isoform X1 [Sesamum indicum]
          Length = 562

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 31/45 (68%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
 Frame = -1

Query: 426 ESFHSMYKTALERLKESVESEKYRKG--KVNTKRPGVTRKKENTA 298
           ESF S+Y  ALERLKESVESEK  KG  KVN K P VTRKKE  +
Sbjct: 508 ESFRSVYSRALERLKESVESEKRSKGKVKVNIKHPAVTRKKEKAS 552


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