BLASTX nr result

ID: Rehmannia31_contig00026226 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00026226
         (308 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011077821.1| ubiquitin carboxyl-terminal hydrolase 15 [Se...    62   8e-09
gb|PIN23230.1| Ubiquitin carboxyl-terminal hydrolase [Handroanth...    55   2e-06

>ref|XP_011077821.1| ubiquitin carboxyl-terminal hydrolase 15 [Sesamum indicum]
          Length = 979

 Score = 61.6 bits (148), Expect = 8e-09
 Identities = 41/110 (37%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
 Frame = +2

Query: 2    SRHQTSAPPKHS-PKIQKSSKPEHTKPNHNVVPSFT-------TDLSSEILVRESRSRPS 157
            SR + S  PKH   +IQ+SS+PE +K NHN+V           T++S  IL+RE+R+R  
Sbjct: 781  SRRRNSGIPKHDLSEIQRSSRPEQSKLNHNLVSDHRLETNVDYTNISRGILIRENRNR-- 838

Query: 158  TLRNYAEFSDAAXXXXXXXXXXXXXXXXXXXXXXXXXALDHADLPFSSIF 307
            +L+NYA FSD                            LDHA++ FSSIF
Sbjct: 839  SLKNYAGFSDVTSSDWSPFTSSDDSSFTTESTRDSFSTLDHAEVRFSSIF 888


>gb|PIN23230.1| Ubiquitin carboxyl-terminal hydrolase [Handroanthus impetiginosus]
          Length = 882

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
 Frame = +2

Query: 2    SRHQTSAPPKHSP-KIQKSSKPEHTK--PNHNVVPSFTTD---LSSEILVRESRSRPSTL 163
            +R +T + PKHS  K Q+S++P   K  P+ N  P    D   +S  I +RE+RS+PSTL
Sbjct: 736  TRARTPSVPKHSSLKTQRSARPPQGKREPSSNHRPETNADHPNISRGIFIRENRSKPSTL 795

Query: 164  RNYAEFSDAAXXXXXXXXXXXXXXXXXXXXXXXXXALDHADLPFSSIF 307
             NYAEFSD                           +   AD+PFSS+F
Sbjct: 796  NNYAEFSDTTSSDRSSLFTSSDDSSFTTESTRDSFS---ADIPFSSVF 840


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