BLASTX nr result

ID: Rehmannia31_contig00026225 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00026225
         (529 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011095177.1| helicase-like transcription factor CHR28 [Se...    85   6e-16
ref|XP_012832312.1| PREDICTED: DNA repair protein RAD16 isoform ...    69   2e-10
ref|XP_012832310.1| PREDICTED: DNA repair protein RAD16 isoform ...    69   2e-10
gb|AMP82929.1| LRR receptor-like serine/threonine-protein kinase...    69   3e-10
gb|PIN05671.1| Helicase-like transcription factor HLTF/DNA helic...    68   6e-10
ref|XP_022864846.1| helicase-like transcription factor CHR28 [Ol...    60   2e-07
emb|CDP04863.1| unnamed protein product [Coffea canephora]             56   6e-06

>ref|XP_011095177.1| helicase-like transcription factor CHR28 [Sesamum indicum]
          Length = 1059

 Score = 85.1 bits (209), Expect = 6e-16
 Identities = 44/54 (81%), Positives = 46/54 (85%), Gaps = 5/54 (9%)
 Frame = +1

Query: 382 LREIDNYRDESPVRDTASSISVRVLPSWAPSNHSNLTG-----RKDPSSSKRQI 528
           LREIDNYRDESPVRDTASSI+ R+LPSWA S HSNLTG     RKDPSSSKRQI
Sbjct: 72  LREIDNYRDESPVRDTASSINSRILPSWASSAHSNLTGYNGLSRKDPSSSKRQI 125


>ref|XP_012832312.1| PREDICTED: DNA repair protein RAD16 isoform X2 [Erythranthe
           guttata]
          Length = 1001

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 37/50 (74%), Positives = 40/50 (80%), Gaps = 3/50 (6%)
 Frame = +1

Query: 382 LREIDNYRDESPVRDTASSISVRVLPSWAPSNHS-NLTG--RKDPSSSKR 522
           LREIDNYRDESP RDT SS++ R+LPSWA S HS   TG  RKDPSSSKR
Sbjct: 18  LREIDNYRDESPERDTLSSMNSRILPSWASSTHSTGQTGLSRKDPSSSKR 67


>ref|XP_012832310.1| PREDICTED: DNA repair protein RAD16 isoform X1 [Erythranthe
           guttata]
 ref|XP_012832311.1| PREDICTED: DNA repair protein RAD16 isoform X1 [Erythranthe
           guttata]
          Length = 1057

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 37/50 (74%), Positives = 40/50 (80%), Gaps = 3/50 (6%)
 Frame = +1

Query: 382 LREIDNYRDESPVRDTASSISVRVLPSWAPSNHS-NLTG--RKDPSSSKR 522
           LREIDNYRDESP RDT SS++ R+LPSWA S HS   TG  RKDPSSSKR
Sbjct: 74  LREIDNYRDESPERDTLSSMNSRILPSWASSTHSTGQTGLSRKDPSSSKR 123


>gb|AMP82929.1| LRR receptor-like serine/threonine-protein kinase [Catalpa bungei]
          Length = 1055

 Score = 68.6 bits (166), Expect = 3e-10
 Identities = 35/52 (67%), Positives = 40/52 (76%), Gaps = 5/52 (9%)
 Frame = +1

Query: 382 LREIDNYRDESPVRDTASSISVRVLPSWAPSNHSNLTGR-----KDPSSSKR 522
           LREIDNY+DESPVRDTASSI+ R+LP+WA   HSNLTG      K+ SS KR
Sbjct: 74  LREIDNYKDESPVRDTASSINSRILPAWAHPTHSNLTGYDGVSIKESSSRKR 125


>gb|PIN05671.1| Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box
           superfamily [Handroanthus impetiginosus]
          Length = 1058

 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 5/54 (9%)
 Frame = +1

Query: 382 LREIDNYRDESPVRDTASSISVRVLPSWAPSNHSNLTG-----RKDPSSSKRQI 528
           LREIDNYRDESP RDT SSI+ R+LP+W    HSNLTG     RK+ SSS ++I
Sbjct: 74  LREIDNYRDESPARDTESSINSRILPAWTHPTHSNLTGYNGVSRKESSSSMKRI 127


>ref|XP_022864846.1| helicase-like transcription factor CHR28 [Olea europaea var.
           sylvestris]
 ref|XP_022864847.1| helicase-like transcription factor CHR28 [Olea europaea var.
           sylvestris]
          Length = 895

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/43 (74%), Positives = 34/43 (79%)
 Frame = +1

Query: 382 LREIDNYRDESPVRDTASSISVRVLPSWAPSNHSNLTGRKDPS 510
           LREIDNYRDESPVRDTA+S S RVLP WA S+  NLTG  D S
Sbjct: 18  LREIDNYRDESPVRDTAASASSRVLPPWA-SSTPNLTGYNDRS 59


>emb|CDP04863.1| unnamed protein product [Coffea canephora]
          Length = 345

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/45 (60%), Positives = 34/45 (75%)
 Frame = +1

Query: 382 LREIDNYRDESPVRDTASSISVRVLPSWAPSNHSNLTGRKDPSSS 516
           LREID Y DESP+RD+A+S + R LP+WA S+ SN+ GR   SSS
Sbjct: 74  LREIDEYFDESPLRDSATSSNARSLPNWAFSSSSNMAGRGSTSSS 118


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