BLASTX nr result

ID: Rehmannia31_contig00026056 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00026056
         (546 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit ...    58   7e-12
gb|KZV23276.1| hypothetical protein F511_02177 [Dorcoceras hygro...    61   3e-11
ref|XP_019167569.1| PREDICTED: replication factor A protein 1-li...    45   2e-07
gb|KZV17224.1| Replication protein A 70 kDa DNA-binding subunit ...    55   2e-07
dbj|BAF64710.1| putative transposase [Ipomoea tricolor]                43   2e-07
ref|XP_019158564.1| PREDICTED: uncharacterized protein LOC109155...    44   3e-07
ref|XP_019153897.1| PREDICTED: uncharacterized protein LOC109150...    44   6e-07
ref|XP_019163481.1| PREDICTED: uncharacterized protein LOC109159...    42   9e-07
ref|XP_019186007.1| PREDICTED: uncharacterized protein LOC109180...    44   4e-06
ref|XP_019153467.1| PREDICTED: uncharacterized protein LOC109149...    43   5e-06
ref|XP_019164355.1| PREDICTED: uncharacterized protein LOC109160...    48   7e-06

>gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit B-like [Dorcoceras
           hygrometricum]
          Length = 161

 Score = 58.2 bits (139), Expect(2) = 7e-12
 Identities = 25/63 (39%), Positives = 45/63 (71%)
 Frame = -1

Query: 192 QGNRINCSIRKMHTEQHKRLLIEGHIYAIRDFLVTNQSDKYKTSDTKFKIIFHGKTHMFE 13
           +G+RI+ S++K   ++ + +L +GH++AI++ +V     KYKT+ +K+KI F  KTH+ E
Sbjct: 34  EGDRIHASVKKPVLDKVRHILKDGHLFAIKNIIVAENRMKYKTTTSKYKINFITKTHVCE 93

Query: 12  MFD 4
           +FD
Sbjct: 94  IFD 96



 Score = 39.7 bits (91), Expect(2) = 7e-12
 Identities = 16/33 (48%), Positives = 24/33 (72%)
 Frame = -3

Query: 370 WAIKVRLVHVYQKPAFNDNTEINSLECIFHDSE 272
           WA+K+RLV  Y+ PA+  + +  +LEC+FHD E
Sbjct: 3   WALKLRLVRCYELPAYEKSGDF-TLECVFHDKE 34


>gb|KZV23276.1| hypothetical protein F511_02177 [Dorcoceras hygrometricum]
          Length = 250

 Score = 60.8 bits (146), Expect(2) = 3e-11
 Identities = 28/68 (41%), Positives = 48/68 (70%)
 Frame = -1

Query: 207 ILYFLQGNRINCSIRKMHTEQHKRLLIEGHIYAIRDFLVTNQSDKYKTSDTKFKIIFHGK 28
           +L+  +G+RI+ S++K   ++ K +L EGH++AI++ +V     KYKT+ +K+KI F  K
Sbjct: 29  VLHDKEGDRIHASVKKPVLDRVKPILKEGHLFAIKNIIVAENRMKYKTTASKYKINFITK 88

Query: 27  THMFEMFD 4
           TH+ E+FD
Sbjct: 89  THVCEIFD 96



 Score = 34.7 bits (78), Expect(2) = 3e-11
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -3

Query: 370 WAIKVRLVHVYQKPAFNDNTEINSLECIFHDSE 272
           W +K+RLV  Y+  A+  N +  +LEC+ HD E
Sbjct: 3   WTLKLRLVRCYELAAYGKNGDF-TLECVLHDKE 34


>ref|XP_019167569.1| PREDICTED: replication factor A protein 1-like [Ipomoea nil]
          Length = 563

 Score = 44.7 bits (104), Expect(2) = 2e-07
 Identities = 28/75 (37%), Positives = 37/75 (49%)
 Frame = -3

Query: 496 TYSQIL*FFSTNKPNADFHLCLFLEMTPMFSPIKHLNKSKTSWAIKVRLVHVYQKPAFND 317
           TYS  L  F T    A   L L      MF     ++   T  A+++R+V  YQ P  ND
Sbjct: 23  TYSLDLSLFHTKA--APVTLILLQTYKKMFILASQISPMNTRQALRLRVVRAYQIPERND 80

Query: 316 NTEINSLECIFHDSE 272
           +T+I S E +FHD E
Sbjct: 81  HTKIRSKEIVFHDEE 95



 Score = 38.1 bits (87), Expect(2) = 2e-07
 Identities = 18/56 (32%), Positives = 32/56 (57%)
 Frame = -1

Query: 192 QGNRINCSIRKMHTEQHKRLLIEGHIYAIRDFLVTNQSDKYKTSDTKFKIIFHGKT 25
           +G+ ++  + K + E++     EG +YAI++F V      YKTS  K+ I F+ +T
Sbjct: 95  EGSFLHAHVPKEYVEKYLSYFSEGSVYAIKNFCVITNFYSYKTSPQKYMIKFNYQT 150


>gb|KZV17224.1| Replication protein A 70 kDa DNA-binding subunit [Dorcoceras
           hygrometricum]
          Length = 388

 Score = 55.5 bits (132), Expect(2) = 2e-07
 Identities = 26/62 (41%), Positives = 42/62 (67%)
 Frame = -1

Query: 189 GNRINCSIRKMHTEQHKRLLIEGHIYAIRDFLVTNQSDKYKTSDTKFKIIFHGKTHMFEM 10
           G+ I+ SI+K   +  + +L EGH++AI++ +V     KYKT+ +K+KI F  KTH+ E+
Sbjct: 115 GDHIHASIKKPVLDSVRPILKEGHLFAIKNIIVAENRMKYKTTASKYKINFITKTHVCEI 174

Query: 9   FD 4
           FD
Sbjct: 175 FD 176



 Score = 27.3 bits (59), Expect(2) = 2e-07
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -3

Query: 355 RLVHVYQKPAFNDNTEINSLECIFHDSE 272
           +LV  Y+ PA+  + +  +LEC+ HD E
Sbjct: 73  KLVRCYELPAYRKSGDF-TLECVLHDKE 99


>dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
          Length = 517

 Score = 42.7 bits (99), Expect(2) = 2e-07
 Identities = 23/68 (33%), Positives = 40/68 (58%)
 Frame = -1

Query: 207 ILYFLQGNRINCSIRKMHTEQHKRLLIEGHIYAIRDFLVTNQSDKYKTSDTKFKIIFHGK 28
           I +  +G  ++ +I K   E++  +L  G +Y+IR+FLV +    YKTS  K+ + F+ K
Sbjct: 45  IFHDKEGTVLHVNIPKEFVEKYSAMLKIGQVYSIRNFLVISNFYTYKTSPHKYMLKFYYK 104

Query: 27  THMFEMFD 4
           T + E+ D
Sbjct: 105 TVVRELKD 112



 Score = 39.7 bits (91), Expect(2) = 2e-07
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = -3

Query: 421 MTPMFSPIKHLNKSKTSWAIKVRLVHVYQKPAFNDNTEINSLECIFHDSE 272
           M P++   + ++   T+ AIKVRL+  Y+ P       I   ECIFHD E
Sbjct: 1   MAPLYILGRDISPMNTTSAIKVRLIRSYEVPERRGAASIKCQECIFHDKE 50


>ref|XP_019158564.1| PREDICTED: uncharacterized protein LOC109155334 [Ipomoea nil]
          Length = 532

 Score = 43.5 bits (101), Expect(2) = 3e-07
 Identities = 22/56 (39%), Positives = 35/56 (62%)
 Frame = -1

Query: 192 QGNRINCSIRKMHTEQHKRLLIEGHIYAIRDFLVTNQSDKYKTSDTKFKIIFHGKT 25
           +G  I+ +I K   E++ +LL EG +YAI+DF V +   +YKT+D  + I F  +T
Sbjct: 51  EGTYIHGNIPKECVEKYSKLLKEGKVYAIKDFAVISHYYQYKTTDHSYMIRFSHET 106



 Score = 38.5 bits (88), Expect(2) = 3e-07
 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -3

Query: 421 MTPMFSPIKHLNKSKTSWAIKVRLVHVYQKP-AFNDNTEINSLECIFHDSE 272
           M P+F   K +  S    AI++RL+  Y  P   N +  I S EC+FHDSE
Sbjct: 1   MAPVFILGKDIKFSTYKKAIRLRLIRTYTVPEGRNSSDSIKSQECVFHDSE 51


>ref|XP_019153897.1| PREDICTED: uncharacterized protein LOC109150424 [Ipomoea nil]
          Length = 512

 Score = 44.3 bits (103), Expect(2) = 6e-07
 Identities = 22/61 (36%), Positives = 37/61 (60%)
 Frame = -1

Query: 207 ILYFLQGNRINCSIRKMHTEQHKRLLIEGHIYAIRDFLVTNQSDKYKTSDTKFKIIFHGK 28
           + +  +G  I+ +I K   E++ +LL EG +YAI+DF V +   +YKT+D  + I F  +
Sbjct: 46  VFHDFEGTYIHGNIPKECVEKYSKLLKEGKVYAIKDFAVISHYYQYKTTDHSYMIRFSHE 105

Query: 27  T 25
           T
Sbjct: 106 T 106



 Score = 36.6 bits (83), Expect(2) = 6e-07
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -3

Query: 421 MTPMFSPIKHLNKSKTSWAIKVRLVHVYQKP-AFNDNTEINSLECIFHDSE 272
           M P+F   K +  S    AI++RL+  Y  P   N +  I S EC+FHD E
Sbjct: 1   MAPVFILGKDIKLSTYKKAIRLRLIRTYTVPEGRNSSDSIKSQECVFHDFE 51


>ref|XP_019163481.1| PREDICTED: uncharacterized protein LOC109159825 [Ipomoea nil]
          Length = 173

 Score = 42.0 bits (97), Expect(2) = 9e-07
 Identities = 21/56 (37%), Positives = 35/56 (62%)
 Frame = -1

Query: 192 QGNRINCSIRKMHTEQHKRLLIEGHIYAIRDFLVTNQSDKYKTSDTKFKIIFHGKT 25
           +G  I+ +I K   +++ +LL EG +YAI+DF V +   +YKT+D  + I F  +T
Sbjct: 51  EGTYIHGNIPKECVKKYSKLLKEGKVYAIKDFAVISHYYQYKTTDHSYMIRFSHET 106



 Score = 38.5 bits (88), Expect(2) = 9e-07
 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -3

Query: 421 MTPMFSPIKHLNKSKTSWAIKVRLVHVYQKP-AFNDNTEINSLECIFHDSE 272
           M P+F   K +  S    AI++RL+  Y  P   N +  I S EC+FHDSE
Sbjct: 1   MAPVFILGKDIKLSTYRKAIRLRLIRTYTVPEGRNSSDSIKSQECVFHDSE 51


>ref|XP_019186007.1| PREDICTED: uncharacterized protein LOC109180751 [Ipomoea nil]
          Length = 462

 Score = 43.9 bits (102), Expect(2) = 4e-06
 Identities = 22/56 (39%), Positives = 36/56 (64%)
 Frame = -1

Query: 192 QGNRINCSIRKMHTEQHKRLLIEGHIYAIRDFLVTNQSDKYKTSDTKFKIIFHGKT 25
           +G  I+ +I K   E++ +LL EG +YAI+DF+V +   +YKT+D  + I F  +T
Sbjct: 67  EGTYIHGNIPKDCVEKYSKLLKEGKVYAIKDFVVISHYYQYKTTDHNYMIRFSHET 122



 Score = 34.3 bits (77), Expect(2) = 4e-06
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -3

Query: 367 AIKVRLVHVYQKP-AFNDNTEINSLECIFHDSE 272
           AI++RL+  Y  P   N +  I S EC+FHDSE
Sbjct: 35  AIRLRLIRTYTVPEGRNSSDSIKSQECVFHDSE 67


>ref|XP_019153467.1| PREDICTED: uncharacterized protein LOC109149929 [Ipomoea nil]
          Length = 505

 Score = 42.7 bits (99), Expect(2) = 5e-06
 Identities = 20/56 (35%), Positives = 34/56 (60%)
 Frame = -1

Query: 192 QGNRINCSIRKMHTEQHKRLLIEGHIYAIRDFLVTNQSDKYKTSDTKFKIIFHGKT 25
           +G+ ++  + K + E++    IEG +YAI++F V N    YKTS  K+ I F+ +T
Sbjct: 37  EGSFLHAHVPKEYVEKYLSCFIEGSVYAIKNFCVINNFYSYKTSPQKYMINFNYQT 92



 Score = 35.0 bits (79), Expect(2) = 5e-06
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = -3

Query: 376 TSWAIKVRLVHVYQKPAFNDNTEINSLECIFHDSE 272
           T  A+++R+V  YQ P  +D ++I S E IFHD E
Sbjct: 3   TRQALRLRVVRAYQIPERSDPSKIRSKEIIFHDDE 37


>ref|XP_019164355.1| PREDICTED: uncharacterized protein LOC109160523 [Ipomoea nil]
          Length = 434

 Score = 47.8 bits (112), Expect(2) = 7e-06
 Identities = 24/60 (40%), Positives = 37/60 (61%)
 Frame = -1

Query: 198 FLQGNRINCSIRKMHTEQHKRLLIEGHIYAIRDFLVTNQSDKYKTSDTKFKIIFHGKTHM 19
           F+ G  ++ +I K   EQ  +LL EG +YAI+DF V +   +YKT+D  + I F  +TH+
Sbjct: 45  FMTGTYVHGNIPKDCVEQFSKLLKEGKVYAIKDFAVISHYYQYKTTDHTYMIRFTHETHV 104



 Score = 29.6 bits (65), Expect(2) = 7e-06
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -3

Query: 421 MTPMFSPIKHLNKSKTSWAIKVRLVHVYQKPAFNDNTEINSLEC 290
           M P++   K L  S    AI++RLV  Y  P   ++  I S EC
Sbjct: 1   MAPLYIQGKDLGISTYKKAIRLRLVRTYNVPEGRNSEAIKSQEC 44


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