BLASTX nr result
ID: Rehmannia31_contig00026035
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia31_contig00026035
(491 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012830213.1| PREDICTED: 30-kDa cleavage and polyadenylati... 84 1e-15
ref|XP_017229957.1| PREDICTED: 30-kDa cleavage and polyadenylati... 78 1e-13
ref|XP_022927141.1| 30-kDa cleavage and polyadenylation specific... 75 1e-12
ref|XP_023001070.1| 30-kDa cleavage and polyadenylation specific... 75 1e-12
ref|XP_023520093.1| 30-kDa cleavage and polyadenylation specific... 75 1e-12
ref|XP_022879363.1| 30-kDa cleavage and polyadenylation specific... 75 2e-12
ref|XP_022879362.1| 30-kDa cleavage and polyadenylation specific... 75 2e-12
gb|PIN07328.1| putative signal transduction protein involved in ... 74 2e-12
gb|PIN11628.1| putative signal transduction protein involved in ... 74 2e-12
gb|KZN07009.1| hypothetical protein DCAR_007846 [Daucus carota s... 74 3e-12
ref|XP_017236120.1| PREDICTED: 30-kDa cleavage and polyadenylati... 74 3e-12
ref|XP_022845837.1| 30-kDa cleavage and polyadenylation specific... 73 5e-12
ref|XP_022845836.1| 30-kDa cleavage and polyadenylation specific... 73 5e-12
ref|XP_011085214.1| 30-kDa cleavage and polyadenylation specific... 73 7e-12
ref|XP_011096672.1| 30-kDa cleavage and polyadenylation specific... 72 1e-11
gb|PIN22428.1| putative signal transduction protein involved in ... 72 1e-11
ref|XP_023541976.1| 30-kDa cleavage and polyadenylation specific... 72 2e-11
ref|XP_022955036.1| 30-kDa cleavage and polyadenylation specific... 72 2e-11
ref|XP_004141524.1| PREDICTED: 30-kDa cleavage and polyadenylati... 72 2e-11
gb|POO00962.1| Zinc finger, CCCH-type domain containing protein ... 71 3e-11
>ref|XP_012830213.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30 [Erythranthe guttata]
gb|EYU43238.1| hypothetical protein MIMGU_mgv1a002387mg [Erythranthe guttata]
Length = 681
Score = 84.0 bits (206), Expect = 1e-15
Identities = 34/42 (80%), Positives = 36/42 (85%)
Frame = +1
Query: 4 GRGRGRGMMWAPHMPPLARGPRPFQGMRGFPPNLTGPDGFPY 129
GRG GRGMMW PHMPPL RGPRPF G+RGFPPN+ G DGFPY
Sbjct: 465 GRGVGRGMMWGPHMPPLGRGPRPFPGVRGFPPNMMGGDGFPY 506
>ref|XP_017229957.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30-like [Daucus carota subsp. sativus]
gb|KZN11206.1| hypothetical protein DCAR_003862 [Daucus carota subsp. sativus]
Length = 689
Score = 78.2 bits (191), Expect = 1e-13
Identities = 35/42 (83%), Positives = 37/42 (88%)
Frame = +1
Query: 4 GRGRGRGMMWAPHMPPLARGPRPFQGMRGFPPNLTGPDGFPY 129
GRGRGRGMMWAP+MP LARG RP GMRGFPP +TGPDGFPY
Sbjct: 456 GRGRGRGMMWAPNMP-LARGGRPMPGMRGFPPIMTGPDGFPY 496
>ref|XP_022927141.1| 30-kDa cleavage and polyadenylation specificity factor 30-like
[Cucurbita moschata]
Length = 706
Score = 75.1 bits (183), Expect = 1e-12
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = +1
Query: 4 GRGRGRGMMWAPHMPPLARGPRPFQGMRGFPPNLTGPDGFPY 129
GRGRGRG+MW PHMP + RGPRPF GM GFPP + GPDG PY
Sbjct: 467 GRGRGRGIMWPPHMP-MGRGPRPFHGMPGFPPGMMGPDGLPY 507
>ref|XP_023001070.1| 30-kDa cleavage and polyadenylation specificity factor 30-like
[Cucurbita maxima]
Length = 707
Score = 75.1 bits (183), Expect = 1e-12
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = +1
Query: 4 GRGRGRGMMWAPHMPPLARGPRPFQGMRGFPPNLTGPDGFPY 129
GRGRGRG+MW PHMP + RGPRPF GM GFPP + GPDG PY
Sbjct: 469 GRGRGRGIMWPPHMP-MGRGPRPFHGMPGFPPGMMGPDGLPY 509
>ref|XP_023520093.1| 30-kDa cleavage and polyadenylation specificity factor 30-like
[Cucurbita pepo subsp. pepo]
Length = 708
Score = 75.1 bits (183), Expect = 1e-12
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = +1
Query: 4 GRGRGRGMMWAPHMPPLARGPRPFQGMRGFPPNLTGPDGFPY 129
GRGRGRG+MW PHMP + RGPRPF GM GFPP + GPDG PY
Sbjct: 469 GRGRGRGIMWPPHMP-MGRGPRPFHGMPGFPPGMMGPDGLPY 509
>ref|XP_022879363.1| 30-kDa cleavage and polyadenylation specificity factor 30-like
isoform X2 [Olea europaea var. sylvestris]
Length = 539
Score = 74.7 bits (182), Expect = 2e-12
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = +1
Query: 4 GRGRGRGMMWAPHMPPLARGPRPFQGMRGFPPNLTGPDGFP 126
GRGRGRG+MW PHMP LA GPRPF GM+GFPPN+ G DGFP
Sbjct: 454 GRGRGRGIMWPPHMP-LAHGPRPFPGMQGFPPNMMGGDGFP 493
>ref|XP_022879362.1| 30-kDa cleavage and polyadenylation specificity factor 30-like
isoform X1 [Olea europaea var. sylvestris]
Length = 562
Score = 74.7 bits (182), Expect = 2e-12
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = +1
Query: 4 GRGRGRGMMWAPHMPPLARGPRPFQGMRGFPPNLTGPDGFP 126
GRGRGRG+MW PHMP LA GPRPF GM+GFPPN+ G DGFP
Sbjct: 477 GRGRGRGIMWPPHMP-LAHGPRPFPGMQGFPPNMMGGDGFP 516
>gb|PIN07328.1| putative signal transduction protein involved in RNA splicing
[Handroanthus impetiginosus]
Length = 431
Score = 74.3 bits (181), Expect = 2e-12
Identities = 34/42 (80%), Positives = 34/42 (80%)
Frame = +1
Query: 4 GRGRGRGMMWAPHMPPLARGPRPFQGMRGFPPNLTGPDGFPY 129
GRGRGRGMMW PHMP LA G RPF GMRGFPPNL G DGF Y
Sbjct: 212 GRGRGRGMMWPPHMP-LAPGARPFPGMRGFPPNLMGGDGFSY 252
>gb|PIN11628.1| putative signal transduction protein involved in RNA splicing
[Handroanthus impetiginosus]
Length = 682
Score = 74.3 bits (181), Expect = 2e-12
Identities = 34/42 (80%), Positives = 34/42 (80%)
Frame = +1
Query: 4 GRGRGRGMMWAPHMPPLARGPRPFQGMRGFPPNLTGPDGFPY 129
GRGRGRGMMW PHMP LA G RPF GMRGFPPNL G DGF Y
Sbjct: 463 GRGRGRGMMWPPHMP-LAPGARPFPGMRGFPPNLMGGDGFSY 503
>gb|KZN07009.1| hypothetical protein DCAR_007846 [Daucus carota subsp. sativus]
Length = 460
Score = 73.9 bits (180), Expect = 3e-12
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +1
Query: 4 GRGRGRGMMWAPHMPPLARGPRPFQGMRGFPPNLTGPDGFPY 129
GRGRGRGMMW PHMP +ARG RP G+RGFPP + GPDGFPY
Sbjct: 228 GRGRGRGMMWPPHMP-VARGGRPMPGVRGFPPVMMGPDGFPY 268
>ref|XP_017236120.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30-like [Daucus carota subsp. sativus]
Length = 698
Score = 73.9 bits (180), Expect = 3e-12
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +1
Query: 4 GRGRGRGMMWAPHMPPLARGPRPFQGMRGFPPNLTGPDGFPY 129
GRGRGRGMMW PHMP +ARG RP G+RGFPP + GPDGFPY
Sbjct: 466 GRGRGRGMMWPPHMP-VARGGRPMPGVRGFPPVMMGPDGFPY 506
>ref|XP_022845837.1| 30-kDa cleavage and polyadenylation specificity factor 30-like
isoform X2 [Olea europaea var. sylvestris]
Length = 657
Score = 73.2 bits (178), Expect = 5e-12
Identities = 32/41 (78%), Positives = 34/41 (82%)
Frame = +1
Query: 4 GRGRGRGMMWAPHMPPLARGPRPFQGMRGFPPNLTGPDGFP 126
GRGRGRGMMW PHMP LA G RPF GM+GFPPN+ G DGFP
Sbjct: 441 GRGRGRGMMWPPHMP-LAHGARPFPGMQGFPPNMMGGDGFP 480
>ref|XP_022845836.1| 30-kDa cleavage and polyadenylation specificity factor 30-like
isoform X1 [Olea europaea var. sylvestris]
Length = 680
Score = 73.2 bits (178), Expect = 5e-12
Identities = 32/41 (78%), Positives = 34/41 (82%)
Frame = +1
Query: 4 GRGRGRGMMWAPHMPPLARGPRPFQGMRGFPPNLTGPDGFP 126
GRGRGRGMMW PHMP LA G RPF GM+GFPPN+ G DGFP
Sbjct: 464 GRGRGRGMMWPPHMP-LAHGARPFPGMQGFPPNMMGGDGFP 503
>ref|XP_011085214.1| 30-kDa cleavage and polyadenylation specificity factor 30 [Sesamum
indicum]
Length = 688
Score = 72.8 bits (177), Expect = 7e-12
Identities = 32/42 (76%), Positives = 34/42 (80%)
Frame = +1
Query: 4 GRGRGRGMMWAPHMPPLARGPRPFQGMRGFPPNLTGPDGFPY 129
GRGRGRGMMW PHMP LARG RPF G+RGFPPN+ DGF Y
Sbjct: 460 GRGRGRGMMWLPHMP-LARGSRPFSGIRGFPPNMMSGDGFSY 500
>ref|XP_011096672.1| 30-kDa cleavage and polyadenylation specificity factor 30 [Sesamum
indicum]
Length = 679
Score = 72.4 bits (176), Expect = 1e-11
Identities = 33/42 (78%), Positives = 33/42 (78%)
Frame = +1
Query: 4 GRGRGRGMMWAPHMPPLARGPRPFQGMRGFPPNLTGPDGFPY 129
GRGRGRGMMW PHMP LARG R F GMRGFPPNL DGF Y
Sbjct: 457 GRGRGRGMMWPPHMP-LARGARAFHGMRGFPPNLVAGDGFSY 497
>gb|PIN22428.1| putative signal transduction protein involved in RNA splicing
[Handroanthus impetiginosus]
Length = 684
Score = 72.0 bits (175), Expect = 1e-11
Identities = 32/42 (76%), Positives = 34/42 (80%)
Frame = +1
Query: 4 GRGRGRGMMWAPHMPPLARGPRPFQGMRGFPPNLTGPDGFPY 129
GRGRGRGMMW HMP LARGPR F G+RGFPPN+ G DG PY
Sbjct: 465 GRGRGRGMMWPSHMP-LARGPRHFPGIRGFPPNMMGGDGLPY 505
>ref|XP_023541976.1| 30-kDa cleavage and polyadenylation specificity factor 30-like
[Cucurbita pepo subsp. pepo]
Length = 706
Score = 71.6 bits (174), Expect = 2e-11
Identities = 30/42 (71%), Positives = 33/42 (78%)
Frame = +1
Query: 4 GRGRGRGMMWAPHMPPLARGPRPFQGMRGFPPNLTGPDGFPY 129
GRGRGRGMMW PHMP + RG RPF GM+GFPP + GPDG Y
Sbjct: 467 GRGRGRGMMWPPHMP-MGRGARPFHGMQGFPPGMMGPDGMSY 507
>ref|XP_022955036.1| 30-kDa cleavage and polyadenylation specificity factor 30-like
[Cucurbita moschata]
Length = 706
Score = 71.6 bits (174), Expect = 2e-11
Identities = 30/42 (71%), Positives = 33/42 (78%)
Frame = +1
Query: 4 GRGRGRGMMWAPHMPPLARGPRPFQGMRGFPPNLTGPDGFPY 129
GRGRGRGMMW PHMP + RG RPF GM+GFPP + GPDG Y
Sbjct: 467 GRGRGRGMMWPPHMP-MGRGARPFHGMQGFPPGMMGPDGMSY 507
>ref|XP_004141524.1| PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30-like [Cucumis sativus]
gb|KGN52613.1| hypothetical protein Csa_5G647360 [Cucumis sativus]
Length = 707
Score = 71.6 bits (174), Expect = 2e-11
Identities = 30/42 (71%), Positives = 33/42 (78%)
Frame = +1
Query: 4 GRGRGRGMMWAPHMPPLARGPRPFQGMRGFPPNLTGPDGFPY 129
GRGRGRGMMW PHMP + RG RPF GM+GFPP + GPDG Y
Sbjct: 468 GRGRGRGMMWPPHMP-MGRGARPFHGMQGFPPGMMGPDGLSY 508
>gb|POO00962.1| Zinc finger, CCCH-type domain containing protein [Trema orientalis]
Length = 708
Score = 70.9 bits (172), Expect = 3e-11
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = +1
Query: 4 GRGRGRGMMWAPHMPPLARGPRPFQGMRGFPPNLTGPDGFPY 129
GRGRGRG+MW PHMP LARG RP GM+GFPP + GPDG PY
Sbjct: 466 GRGRGRGVMWPPHMP-LARGARPMPGMQGFPPVMMGPDGSPY 506