BLASTX nr result
ID: Rehmannia31_contig00025888
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia31_contig00025888
(372 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PNX79108.1| copia-type polyprotein, partial [Trifolium pratense] 205 3e-61
gb|PKA46730.1| Retrovirus-related Pol polyprotein from transposo... 172 4e-47
gb|KZV32174.1| retrovirus-related Pol polyprotein from transposo... 170 5e-47
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 171 9e-47
dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsi... 171 9e-47
ref|XP_020867873.1| uncharacterized protein LOC110224828 [Arabid... 170 1e-46
gb|PKA48313.1| Retrovirus-related Pol polyprotein from transposo... 170 1e-46
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera] 170 1e-46
gb|KYP68962.1| Retrovirus-related Pol polyprotein from transposo... 164 1e-46
dbj|GAU22794.1| hypothetical protein TSUD_142340 [Trifolium subt... 169 2e-46
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 169 3e-46
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 169 3e-46
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera] 168 6e-46
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A... 168 6e-46
gb|PKA46818.1| Retrovirus-related Pol polyprotein from transposo... 164 7e-46
gb|KYP66219.1| Retrovirus-related Pol polyprotein from transposo... 168 8e-46
gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposo... 168 8e-46
gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposo... 168 8e-46
gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposo... 168 8e-46
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 168 8e-46
>gb|PNX79108.1| copia-type polyprotein, partial [Trifolium pratense]
Length = 535
Score = 205 bits (521), Expect = 3e-61
Identities = 95/123 (77%), Positives = 112/123 (91%)
Frame = +3
Query: 3 KAPLEIVHADICGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVE 182
+APLE+VHADICGPT+TPSL + RYFLLFVDD++RM+W+Y L QKSEAF KFL FK VE
Sbjct: 369 QAPLELVHADICGPTRTPSLGNKRYFLLFVDDYTRMIWIYFLDQKSEAFVKFLHFKALVE 428
Query: 183 NQSGRKIKTLRTDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMAR 362
NQSG K+KTLRTDRGGEFI K FL+YC+++GIHRQLT+R++PQQNGVAERKNRTIVEMAR
Sbjct: 429 NQSGHKLKTLRTDRGGEFIYKPFLNYCEEQGIHRQLTIRHTPQQNGVAERKNRTIVEMAR 488
Query: 363 SMM 371
SM+
Sbjct: 489 SML 491
>gb|PKA46730.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 1112
Score = 172 bits (435), Expect = 4e-47
Identities = 77/123 (62%), Positives = 98/123 (79%)
Frame = +3
Query: 3 KAPLEIVHADICGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVE 182
+ PLE+VHAD+CGP +TPS+N++RYF+LF+DDFSRM WV+ L KS+A KF+EF+ + E
Sbjct: 362 RRPLELVHADVCGPMRTPSMNNSRYFILFIDDFSRMSWVFFLVHKSDALDKFIEFRAFAE 421
Query: 183 NQSGRKIKTLRTDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMAR 362
+ G IK LRTDRGGEF+ F YCK GI RQLTVR +P+QNG+AERKNRT+VEMAR
Sbjct: 422 KECGYPIKVLRTDRGGEFLSHDFNLYCKKYGIRRQLTVRKTPEQNGIAERKNRTVVEMAR 481
Query: 363 SMM 371
M+
Sbjct: 482 CML 484
>gb|KZV32174.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dorcoceras hygrometricum]
Length = 699
Score = 170 bits (430), Expect = 5e-47
Identities = 79/121 (65%), Positives = 95/121 (78%)
Frame = +3
Query: 9 PLEIVHADICGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQ 188
PLE+VHAD+CGP +T +L ++YFLLFVDD+SRM WVY LK KSEAF +F +FK VE Q
Sbjct: 348 PLELVHADLCGPMRTETLGGSKYFLLFVDDYSRMSWVYFLKFKSEAFGQFFKFKALVEKQ 407
Query: 189 SGRKIKTLRTDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSM 368
G +K LRTDRGGEF F YC+ GIH++LT Y+P+QNGVAERKNRTIVEMARSM
Sbjct: 408 KGSNLKILRTDRGGEFTSMEFNQYCEKHGIHKELTAPYTPEQNGVAERKNRTIVEMARSM 467
Query: 369 M 371
+
Sbjct: 468 L 468
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gb|AAG50765.1|AC079131_10 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 171 bits (432), Expect = 9e-47
Identities = 80/121 (66%), Positives = 95/121 (78%)
Frame = +3
Query: 9 PLEIVHADICGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQ 188
PLE++H D+CGP + SL + YFLLF+DDFSR WVY LK+KSE F F +FK +VE +
Sbjct: 526 PLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKE 585
Query: 189 SGRKIKTLRTDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSM 368
SG IKT+R+DRGGEF K FL YC+D GI RQLTV SPQQNGVAERKNRTI+EMARSM
Sbjct: 586 SGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSM 645
Query: 369 M 371
+
Sbjct: 646 L 646
>dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1499
Score = 171 bits (432), Expect = 9e-47
Identities = 77/120 (64%), Positives = 95/120 (79%)
Frame = +3
Query: 12 LEIVHADICGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQS 191
LE++H+D+CGP QT S+N +RYFL F+DDFSRM WVY LK KSE KF FK YVENQS
Sbjct: 516 LELIHSDVCGPMQTESINGSRYFLTFIDDFSRMTWVYFLKNKSEVITKFKIFKPYVENQS 575
Query: 192 GRKIKTLRTDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMM 371
+IK LRTD GGEF+ + F+ C++ GIH ++T YSPQQNGVAER+NRT+VEMARSM+
Sbjct: 576 ESRIKRLRTDGGGEFLSREFIKLCQESGIHHEITTPYSPQQNGVAERRNRTLVEMARSMI 635
>ref|XP_020867873.1| uncharacterized protein LOC110224828 [Arabidopsis lyrata subsp.
lyrata]
Length = 961
Score = 170 bits (431), Expect = 1e-46
Identities = 79/121 (65%), Positives = 94/121 (77%)
Frame = +3
Query: 9 PLEIVHADICGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQ 188
PLE++H D+CGP + SL + YFLLF+DDFSR WVY LK+KSE F F FK +VE +
Sbjct: 525 PLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKRFKAHVEKE 584
Query: 189 SGRKIKTLRTDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSM 368
SG IK++R+DRGGEF K FL YC+D GI RQLTV SPQQNGVAERKNRTI+EMARSM
Sbjct: 585 SGLTIKSMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSM 644
Query: 369 M 371
+
Sbjct: 645 L 645
>gb|PKA48313.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 1063
Score = 170 bits (431), Expect = 1e-46
Identities = 80/123 (65%), Positives = 95/123 (77%)
Frame = +3
Query: 3 KAPLEIVHADICGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVE 182
+ PL+++HADICGP QTPSLN+++YFLLFVDD SR W+Y +KQKSEAF KFL FK E
Sbjct: 308 RKPLQLIHADICGPMQTPSLNNSKYFLLFVDDLSRKSWLYFIKQKSEAFSKFLIFKASAE 367
Query: 183 NQSGRKIKTLRTDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMAR 362
+ G I+ LRTDRG EF F +C+ GI RQLT Y+PQQNGVAERKNRTIVEMAR
Sbjct: 368 KECGEPIQILRTDRGSEFCSNEFTKFCQLNGIKRQLTASYTPQQNGVAERKNRTIVEMAR 427
Query: 363 SMM 371
SM+
Sbjct: 428 SML 430
>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
Length = 1274
Score = 170 bits (431), Expect = 1e-46
Identities = 78/120 (65%), Positives = 95/120 (79%)
Frame = +3
Query: 12 LEIVHADICGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQS 191
LEI+HAD+CGP QT S +RYFLLF DD SRM WVY L+ K+E F F +FK +VE QS
Sbjct: 498 LEIIHADLCGPMQTASFGGSRYFLLFTDDHSRMSWVYFLQSKAETFETFKKFKAFVEKQS 557
Query: 192 GRKIKTLRTDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMM 371
G+ IK LRTDRGGEF+ F +C+++G+HR+LT YSP+QNGVAERKNRT+VEMARSMM
Sbjct: 558 GKCIKVLRTDRGGEFLSNDFKVFCEEEGLHRELTTPYSPEQNGVAERKNRTVVEMARSMM 617
>gb|KYP68962.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 401
Score = 164 bits (414), Expect = 1e-46
Identities = 74/120 (61%), Positives = 97/120 (80%)
Frame = +3
Query: 12 LEIVHADICGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQS 191
LE++H DICGP +T SL++NRYF+LF+DDFSRM WVY +K+KSE F +FK VE QS
Sbjct: 97 LELIHTDICGPMRTSSLHNNRYFILFIDDFSRMTWVYFIKEKSEVFGILKKFKTLVEKQS 156
Query: 192 GRKIKTLRTDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMM 371
G++IK LR+DRG E+ F +C+D+GI ++LTV YSPQQNGV+ERKNRT++EMARSM+
Sbjct: 157 GKQIKVLRSDRGKEYTSHEFDKFCEDEGIEQKLTVSYSPQQNGVSERKNRTVMEMARSML 216
>dbj|GAU22794.1| hypothetical protein TSUD_142340 [Trifolium subterraneum]
Length = 818
Score = 169 bits (428), Expect = 2e-46
Identities = 77/123 (62%), Positives = 99/123 (80%)
Frame = +3
Query: 3 KAPLEIVHADICGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVE 182
K LE++H D+CGP +TPSLN++RYF+LF+DDFSRM WVY +K+KSE F F +FK VE
Sbjct: 466 KDVLELIHTDVCGPMRTPSLNNSRYFILFIDDFSRMTWVYFIKEKSEVFGIFKKFKALVE 525
Query: 183 NQSGRKIKTLRTDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMAR 362
QSG+ IK LR+DRG E+ F +C+D+GI +QLTV YSPQQNG++ERKNRT++EMAR
Sbjct: 526 KQSGKNIKMLRSDRGKEYNSHEFDKFCEDEGIEQQLTVAYSPQQNGMSERKNRTVMEMAR 585
Query: 363 SMM 371
SMM
Sbjct: 586 SMM 588
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 169 bits (428), Expect = 3e-46
Identities = 79/121 (65%), Positives = 94/121 (77%)
Frame = +3
Query: 9 PLEIVHADICGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQ 188
PLE++H D+CGP + SL + YFLLF+DDFSR WVY LK+KSE F F +FK +VE +
Sbjct: 526 PLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKE 585
Query: 189 SGRKIKTLRTDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSM 368
SG IKT+R+DRGGEF K FL YC+D GI RQLTV SPQQNGV ERKNRTI+EMARSM
Sbjct: 586 SGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSM 645
Query: 369 M 371
+
Sbjct: 646 L 646
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 169 bits (428), Expect = 3e-46
Identities = 79/121 (65%), Positives = 94/121 (77%)
Frame = +3
Query: 9 PLEIVHADICGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQ 188
PLE++H D+CGP + SL + YFLLF+DDFSR WVY LK+KSE F F +FK +VE +
Sbjct: 526 PLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKE 585
Query: 189 SGRKIKTLRTDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSM 368
SG IKT+R+DRGGEF K FL YC+D GI RQLTV SPQQNGV ERKNRTI+EMARSM
Sbjct: 586 SGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSM 645
Query: 369 M 371
+
Sbjct: 646 L 646
>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
Length = 1183
Score = 168 bits (426), Expect = 6e-46
Identities = 77/120 (64%), Positives = 95/120 (79%)
Frame = +3
Query: 12 LEIVHADICGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQS 191
LEI+HAD+CGP QT S +RYFLLF +D SRM WVY L+ K+E F F +FK +VE QS
Sbjct: 432 LEIIHADLCGPMQTASFGGSRYFLLFTNDHSRMSWVYFLQSKAETFETFKKFKAFVEKQS 491
Query: 192 GRKIKTLRTDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMM 371
G+ IK LRTDRGGEF+ F +C+++G+HR+LT YSP+QNGVAERKNRT+VEMARSMM
Sbjct: 492 GKCIKVLRTDRGGEFLSNDFKVFCEEEGLHRELTTPYSPEQNGVAERKNRTVVEMARSMM 551
>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1272
Score = 168 bits (426), Expect = 6e-46
Identities = 79/121 (65%), Positives = 94/121 (77%)
Frame = +3
Query: 9 PLEIVHADICGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQ 188
PLE++H D+CGP + SL + YFLLF+DDFSR WVY LK+KSE F F +FK +VE +
Sbjct: 526 PLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKE 585
Query: 189 SGRKIKTLRTDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSM 368
SG IKT+R+D GGEF K FL YC+D GI RQLTV SPQQNGVAERKNRTI+EMARSM
Sbjct: 586 SGLVIKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSM 645
Query: 369 M 371
+
Sbjct: 646 L 646
>gb|PKA46818.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 485
Score = 164 bits (414), Expect = 7e-46
Identities = 75/121 (61%), Positives = 96/121 (79%)
Frame = +3
Query: 9 PLEIVHADICGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQ 188
PLE+V++D+CGP + SL+ +RYF+LF+DD++RM WVY LK KSEA F FK +VE Q
Sbjct: 183 PLELVYSDLCGPMRIESLSGSRYFILFIDDYTRMNWVYFLKNKSEALEAFKIFKAFVERQ 242
Query: 189 SGRKIKTLRTDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSM 368
SG IK LRTDRGGEF+ F +C++ GIHR+LT Y+P+QNGVAERKNRTIVEMARS+
Sbjct: 243 SGYFIKVLRTDRGGEFLSHEFKAFCEENGIHRELTAPYTPEQNGVAERKNRTIVEMARSL 302
Query: 369 M 371
+
Sbjct: 303 L 303
>gb|KYP66219.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1033
Score = 168 bits (425), Expect = 8e-46
Identities = 79/121 (65%), Positives = 93/121 (76%)
Frame = +3
Query: 9 PLEIVHADICGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQ 188
PLE++H D+CGP + SL + YFLLF+DDFSR WVY LK+KSE F F +FK +VE +
Sbjct: 458 PLELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKE 517
Query: 189 SGRKIKTLRTDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSM 368
SG IK LR+DRGGEF K F YC+D GI RQLTV SPQQNGVAERKNRTI+EMARSM
Sbjct: 518 SGLLIKALRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSM 577
Query: 369 M 371
+
Sbjct: 578 L 578
>gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1331
Score = 168 bits (425), Expect = 8e-46
Identities = 79/121 (65%), Positives = 93/121 (76%)
Frame = +3
Query: 9 PLEIVHADICGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQ 188
PLE++H D+CGP + SL + YFLLF+DDFSR WVY LK+KSE F F +FK +VE +
Sbjct: 513 PLELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKE 572
Query: 189 SGRKIKTLRTDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSM 368
SG IK LR+DRGGEF K F YC+D GI RQLTV SPQQNGVAERKNRTI+EMARSM
Sbjct: 573 SGLLIKALRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSM 632
Query: 369 M 371
+
Sbjct: 633 L 633
>gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1342
Score = 168 bits (425), Expect = 8e-46
Identities = 79/121 (65%), Positives = 93/121 (76%)
Frame = +3
Query: 9 PLEIVHADICGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQ 188
PLE++H D+CGP + SL + YFLLF+DDFSR WVY LK+KSE F F +FK +VE +
Sbjct: 524 PLELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKE 583
Query: 189 SGRKIKTLRTDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSM 368
SG IK LR+DRGGEF K F YC+D GI RQLTV SPQQNGVAERKNRTI+EMARSM
Sbjct: 584 SGLLIKALRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSM 643
Query: 369 M 371
+
Sbjct: 644 L 644
>gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1342
Score = 168 bits (425), Expect = 8e-46
Identities = 79/121 (65%), Positives = 93/121 (76%)
Frame = +3
Query: 9 PLEIVHADICGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQ 188
PLE++H D+CGP + SL + YFLLF+DDFSR WVY LK+KSE F F +FK +VE +
Sbjct: 524 PLELIHTDVCGPIKPRSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKE 583
Query: 189 SGRKIKTLRTDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSM 368
SG IK LR+DRGGEF K F YC+D GI RQLTV SPQQNGVAERKNRTI+EMARSM
Sbjct: 584 SGLLIKALRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSM 643
Query: 369 M 371
+
Sbjct: 644 L 644
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 168 bits (425), Expect = 8e-46
Identities = 79/120 (65%), Positives = 94/120 (78%)
Frame = +3
Query: 12 LEIVHADICGPTQTPSLNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQS 191
LE++H D+CGP + SL + YFLLF+DDFSR WVY LK+KSE F F +FK +VE +S
Sbjct: 527 LELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKES 586
Query: 192 GRKIKTLRTDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMM 371
G IKT+R+DRGGEF K FL YC+D GI RQLTV SPQQNGVAERKNRTI+EMARSM+
Sbjct: 587 GLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSML 646