BLASTX nr result

ID: Rehmannia31_contig00025682 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00025682
         (450 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011099844.1| 26S proteasome non-ATPase regulatory subunit...    58   5e-07
ref|XP_011099866.1| 26S proteasome non-ATPase regulatory subunit...    58   5e-07
ref|XP_011099843.1| 26S proteasome non-ATPase regulatory subunit...    58   5e-07
gb|PIN15024.1| 26S proteasome regulatory complex, subunit RPN10/...    57   2e-06
gb|EPS65068.1| hypothetical protein M569_09711, partial [Genlise...    55   8e-06
gb|KZV22553.1| 26S proteasome non-ATPase regulatory subunit 4 [D...    55   9e-06

>ref|XP_011099844.1| 26S proteasome non-ATPase regulatory subunit 4 homolog isoform X2
           [Sesamum indicum]
          Length = 402

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 29/32 (90%), Positives = 29/32 (90%)
 Frame = +2

Query: 2   SMDDSSSTVAVRDTDMSDASADDHDLQLGESL 97
           SMDDSSSTVAVRDTDMSDASADDHDLQL   L
Sbjct: 303 SMDDSSSTVAVRDTDMSDASADDHDLQLALQL 334


>ref|XP_011099866.1| 26S proteasome non-ATPase regulatory subunit 4 homolog [Sesamum
           indicum]
 ref|XP_011099867.1| 26S proteasome non-ATPase regulatory subunit 4 homolog [Sesamum
           indicum]
          Length = 403

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 29/32 (90%), Positives = 29/32 (90%)
 Frame = +2

Query: 2   SMDDSSSTVAVRDTDMSDASADDHDLQLGESL 97
           SMDDSSSTVAVRDTDMSDASADDHDLQL   L
Sbjct: 303 SMDDSSSTVAVRDTDMSDASADDHDLQLALQL 334


>ref|XP_011099843.1| 26S proteasome non-ATPase regulatory subunit 4 homolog isoform X1
           [Sesamum indicum]
          Length = 403

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 29/32 (90%), Positives = 29/32 (90%)
 Frame = +2

Query: 2   SMDDSSSTVAVRDTDMSDASADDHDLQLGESL 97
           SMDDSSSTVAVRDTDMSDASADDHDLQL   L
Sbjct: 303 SMDDSSSTVAVRDTDMSDASADDHDLQLALQL 334


>gb|PIN15024.1| 26S proteasome regulatory complex, subunit RPN10/PSMD4
           [Handroanthus impetiginosus]
          Length = 396

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/32 (87%), Positives = 28/32 (87%)
 Frame = +2

Query: 2   SMDDSSSTVAVRDTDMSDASADDHDLQLGESL 97
           SMDDSSST AVRDTDMSDASADDHDLQL   L
Sbjct: 303 SMDDSSSTAAVRDTDMSDASADDHDLQLALQL 334


>gb|EPS65068.1| hypothetical protein M569_09711, partial [Genlisea aurea]
          Length = 382

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/32 (84%), Positives = 28/32 (87%)
 Frame = +2

Query: 2   SMDDSSSTVAVRDTDMSDASADDHDLQLGESL 97
           SMDDSSSTVAVRDTDMSD SA+DHDLQL   L
Sbjct: 299 SMDDSSSTVAVRDTDMSDISAEDHDLQLALQL 330


>gb|KZV22553.1| 26S proteasome non-ATPase regulatory subunit 4 [Dorcoceras
           hygrometricum]
          Length = 402

 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 27/32 (84%), Positives = 27/32 (84%)
 Frame = +2

Query: 2   SMDDSSSTVAVRDTDMSDASADDHDLQLGESL 97
           SMDDSSS  AVRDTDMSDASADDHDLQL   L
Sbjct: 303 SMDDSSSVAAVRDTDMSDASADDHDLQLALQL 334


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