BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00025366
         (1495 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PRQ17740.1| putative RNA-directed DNA polymerase [Rosa chinen...   691   0.0  
emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]   671   0.0  
emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera]   659   0.0  
gb|PNX71231.1| copia-type polyprotein, partial [Trifolium pratense]   626   0.0  
gb|PNX95763.1| retrotransposon-related protein, partial [Trifoli...   630   0.0  
gb|KYP74877.1| Retrovirus-related Pol polyprotein from transposo...   627   0.0  
gb|PNY07765.1| putative copia-type polyprotein [Trifolium pratense]   629   0.0  
gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]                   623   0.0  
dbj|GAU26746.1| hypothetical protein TSUD_317440 [Trifolium subt...   633   0.0  
emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]   622   0.0  
gb|PNX96091.1| retrotransposon-related protein [Trifolium pratense]   619   0.0  
gb|PNY15642.1| copia-type polyprotein [Trifolium pratense]            598   0.0  
gb|PNX94698.1| copia-type polyprotein [Trifolium pratense]            605   0.0  
gb|PNX95204.1| copia-type polyprotein [Trifolium pratense]            605   0.0  
gb|PNX89974.1| copia-type polyprotein, partial [Trifolium pratense]   574   0.0  
gb|KOM33859.1| hypothetical protein LR48_Vigan02g000900 [Vigna a...   605   0.0  
dbj|GAU23361.1| hypothetical protein TSUD_334080 [Trifolium subt...   602   0.0  
emb|CAN79845.1| hypothetical protein VITISV_027568 [Vitis vinifera]   599   0.0  
dbj|GAU16533.1| hypothetical protein TSUD_167640 [Trifolium subt...   594   0.0  
dbj|GAU16044.1| hypothetical protein TSUD_339150 [Trifolium subt...   597   0.0  

>gb|PRQ17740.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1302

 Score =  691 bits (1782), Expect = 0.0
 Identities = 343/498 (68%), Positives = 387/498 (77%)
 Frame = +2

Query: 2    GEFTSLEFNAFCKSNGISRQLTAAYTPQQNGVAERKNRTIMNMVRSMLTEKQVPKSFWPE 181
            GEFTS EFN FC ++GISRQLTAAYTPQQNGVAERKNRTIMNMVRSML+EKQVPK FWPE
Sbjct: 562  GEFTSQEFNTFCSTHGISRQLTAAYTPQQNGVAERKNRTIMNMVRSMLSEKQVPKVFWPE 621

Query: 182  AVNWTVHVLNRSPTLAVKDMTPEEAWSGVKPNVDYFRVFGCIVHVHVPDNKRKKLDDKSF 361
            AVNW++H+LNRSPTLAVKDMTPEEAWSG+KP V YF+VFGCI HVH+P+ KRKKLD+KS+
Sbjct: 622  AVNWSIHILNRSPTLAVKDMTPEEAWSGIKPVVHYFKVFGCIAHVHIPEAKRKKLDNKSY 681

Query: 362  KCVLLGMSEESKAYRLYDPVSKKIVVSRDVVFEENENWNWGTSNEETRFDVLEWSDSNXX 541
            KCVLLG+SEESKAYRLYDP+S++IVVSRDVVFEE+E+W WG + EE R DVL+WSD    
Sbjct: 682  KCVLLGVSEESKAYRLYDPISERIVVSRDVVFEEDESWEWGRTAEEVRLDVLDWSDGEEE 741

Query: 542  XXXXXXXXXXXXXXXXXXXXXXTSLSLRESSGENSQTFGESLPSSPERRNRRAPFWMEDY 721
                                     +  E    N+    E      E R R  P WM+DY
Sbjct: 742  ENESAQSEEE------------NEYAQSEEENVNNDDAEEEEEILEEGRTRMQPVWMQDY 789

Query: 722  VTGEEFSEEEIEHNLVLFTSTTDPATFDEAVQSSKWRAAMDLEIKAIERNETWELTDLPK 901
            V+GE  SEEE  +N+V+FTS TDPATF+EA +S+KW+AAMD EI+AIERN TWELT LP 
Sbjct: 790  VSGEGLSEEEETNNVVMFTSVTDPATFEEAFKSAKWKAAMDQEIEAIERNHTWELTTLPA 849

Query: 902  GAKTIGVKWVFKTKLNENGEVDKCKARLVAKGYAQQYGIYYTEVFAPVARWDTIRMIIAL 1081
            GAKTIGVKW+FKTKLNENGEVDKCKARLVAKGYAQQYGI YTEVFAPVARWDTIRM+IAL
Sbjct: 850  GAKTIGVKWIFKTKLNENGEVDKCKARLVAKGYAQQYGIDYTEVFAPVARWDTIRMVIAL 909

Query: 1082 AARNGWSVYQLDVKSAFLHGELNEAVFVEQPQGYEKKGEEHKVYRLKKALYGLKQAPRAW 1261
            AA+ GW VYQLDVKSAFLHGEL EA+F++QPQGY KKG+E KVY+L KALYGLKQAPRAW
Sbjct: 910  AAQKGWKVYQLDVKSAFLHGELTEAIFIDQPQGYVKKGDELKVYKLNKALYGLKQAPRAW 969

Query: 1262 YSRIEAYFAKEGFERYSCEHTLFIKTGDGGKILIVSLYVDDLIFTGNDEIMFIKFKNSMK 1441
            YSRIEAYF KEGFER   EHTLF+K+  GGKILI                       SMK
Sbjct: 970  YSRIEAYFIKEGFERCPHEHTLFVKSSKGGKILI----------------------KSMK 1007

Query: 1442 LEFDMTDLGKMKYFLGVE 1495
             EFDM+DLG M+YFLGVE
Sbjct: 1008 DEFDMSDLGMMRYFLGVE 1025


>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
          Length = 1088

 Score =  671 bits (1730), Expect = 0.0
 Identities = 338/501 (67%), Positives = 390/501 (77%), Gaps = 3/501 (0%)
 Frame = +2

Query: 2    GEFTSLEFNAFCKSNGISRQLTAAYTPQQNGVAERKNRTIMNMVRSMLTEKQVPKSFWPE 181
            GEFTS EF +FC  NGI RQLTAAYTPQQNGVAERKNRTIMNMVRSML+EKQ+PK+FWPE
Sbjct: 319  GEFTSNEFTSFCNENGILRQLTAAYTPQQNGVAERKNRTIMNMVRSMLSEKQIPKTFWPE 378

Query: 182  AVNWTVHVLNRSPTLAVKDMTPEEAWSGVKPNVDYFRVFGCIVHVHVPDNKRKKLDDKSF 361
            AVNWTVHVLNRSPTLAVK+ TPEEAWSG KP+VD+FR+FGCI HVHVPD+KR KLD KS 
Sbjct: 379  AVNWTVHVLNRSPTLAVKNKTPEEAWSGRKPSVDHFRIFGCISHVHVPDHKRVKLDAKSL 438

Query: 362  KCVLLGMSEESKAYRLYDPVSKKIVVSRDVVFEENENWNWGTSNEETRFDVLEWSDSNXX 541
            +C+LLG+SEESKAYRL+DP+S+KI++SRDVVFEE++ W W  S+E      LEW      
Sbjct: 439  RCILLGVSEESKAYRLFDPISQKIIISRDVVFEEDQQWKWDNSHEPAILADLEWESDEET 498

Query: 542  XXXXXXXXXXXXXXXXXXXXXXTSLSLRESSGENSQTFGESLPSSP-ERRNRRAPFWMED 718
                                   S S    S EN +T  E   S+P E R RR P WM+D
Sbjct: 499  DTEDDGNEEEPEAGEDMG----NSESNDSDSFENGETTYED--STPHEGRTRRPPTWMQD 552

Query: 719  YVTGEEFSEEEIEH--NLVLFTSTTDPATFDEAVQSSKWRAAMDLEIKAIERNETWELTD 892
            Y TG   S+EE  +   L LFT + DP T+D+AV+S KWR AM+ EI+AIERN TWELTD
Sbjct: 553  YETGAGLSDEESVNLAQLALFTDS-DPTTYDDAVRSEKWRLAMNQEIEAIERNNTWELTD 611

Query: 893  LPKGAKTIGVKWVFKTKLNENGEVDKCKARLVAKGYAQQYGIYYTEVFAPVARWDTIRMI 1072
            LP G KTIGVKW+FKTKLNENGEVDK KARLVAKGY+QQYG  Y EVFAPVAR +TIR++
Sbjct: 612  LPSGGKTIGVKWIFKTKLNENGEVDKYKARLVAKGYSQQYGXDYVEVFAPVARLETIRIV 671

Query: 1073 IALAARNGWSVYQLDVKSAFLHGELNEAVFVEQPQGYEKKGEEHKVYRLKKALYGLKQAP 1252
            I+LAA+  W +YQLDVKSAFLHGE++E  FVEQP GYE+KG+E KVYRLKKALYGLKQAP
Sbjct: 672  ISLAAQKDWMIYQLDVKSAFLHGEIHEEXFVEQPPGYEQKGKESKVYRLKKALYGLKQAP 731

Query: 1253 RAWYSRIEAYFAKEGFERYSCEHTLFIKTGDGGKILIVSLYVDDLIFTGNDEIMFIKFKN 1432
            RAWYSRIE+YF KEGF +   EHTLF KT +GGKILIV LYVD+LIFTGNDE MF +FK 
Sbjct: 732  RAWYSRIESYFIKEGFNKCPYEHTLFTKTAEGGKILIVCLYVDELIFTGNDESMFKQFKK 791

Query: 1433 SMKLEFDMTDLGKMKYFLGVE 1495
            SM +EFDMTDL K++YFLG+E
Sbjct: 792  SMMVEFDMTDLEKLRYFLGIE 812


>emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera]
          Length = 1084

 Score =  659 bits (1701), Expect = 0.0
 Identities = 333/423 (78%), Positives = 354/423 (83%), Gaps = 1/423 (0%)
 Frame = +2

Query: 230  VKDMTPEEAWSGVKPNVDYFRVFGCIVHVHVPDNKRKKLDDKSFKCVLLGMSEESKAYRL 409
            VK +T EEAWSGVKPNVDYF VFGCI HVHVPDNKRKKLDDKSF+CVLLG+SE SKAYRL
Sbjct: 424  VKGVTXEEAWSGVKPNVDYFXVFGCIGHVHVPDNKRKKLDDKSFQCVLLGVSEXSKAYRL 483

Query: 410  YDPVSKKIVVSRDVVFEENENWNWGTSNEETRFDVLEWSDSNXXXXXXXXXXXXXXXXXX 589
            YD VSKKIVVSRDVVF E++ WNWG SNEE +  +                         
Sbjct: 484  YDLVSKKIVVSRDVVFXEDKCWNWGRSNEEVKMTLKR-------------GVAVEGRERE 530

Query: 590  XXXXXXTSLS-LRESSGENSQTFGESLPSSPERRNRRAPFWMEDYVTGEEFSEEEIEHNL 766
                   SL  L ES GENS   GES PSS + RNRR PF MEDYV+G EFSE ++EHNL
Sbjct: 531  DSLSSSESLGXLSESLGENSGVSGESSPSSQQGRNRRVPFXMEDYVSGGEFSEGDVEHNL 590

Query: 767  VLFTSTTDPATFDEAVQSSKWRAAMDLEIKAIERNETWELTDLPKGAKTIGVKWVFKTKL 946
            VLFTST DP TF+EAVQSSKWRA MDLEI+AIE N TWELTDLP+G K IGVKWVFKTKL
Sbjct: 591  VLFTSTXDPTTFEEAVQSSKWRAXMDLEIEAIEXNXTWELTDLPEGVKKIGVKWVFKTKL 650

Query: 947  NENGEVDKCKARLVAKGYAQQYGIYYTEVFAPVARWDTIRMIIALAARNGWSVYQLDVKS 1126
            NENG+VDKCKARLVAKGYAQQ+GI YTEVFAPVARWDTIRM+IALAARNGWSVYQLDVKS
Sbjct: 651  NENGKVDKCKARLVAKGYAQQHGIDYTEVFAPVARWDTIRMVIALAARNGWSVYQLDVKS 710

Query: 1127 AFLHGELNEAVFVEQPQGYEKKGEEHKVYRLKKALYGLKQAPRAWYSRIEAYFAKEGFER 1306
            AFLHGELNEAVF+EQPQGYEKKGEEHKVY+LKKALYGLKQAPRAWYSRIEAYF KEGFER
Sbjct: 711  AFLHGELNEAVFIEQPQGYEKKGEEHKVYKLKKALYGLKQAPRAWYSRIEAYFIKEGFER 770

Query: 1307 YSCEHTLFIKTGDGGKILIVSLYVDDLIFTGNDEIMFIKFKNSMKLEFDMTDLGKMKYFL 1486
             SC+HTLFIKTGDGGKILIVSLYVDDLIFTGNDE MF+KFKNSMKLEFDMTDLGKMKYFL
Sbjct: 771  CSCDHTLFIKTGDGGKILIVSLYVDDLIFTGNDESMFVKFKNSMKLEFDMTDLGKMKYFL 830

Query: 1487 GVE 1495
            GVE
Sbjct: 831  GVE 833


>gb|PNX71231.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 1017

 Score =  626 bits (1615), Expect = 0.0
 Identities = 312/500 (62%), Positives = 369/500 (73%), Gaps = 2/500 (0%)
 Frame = +2

Query: 2    GEFTSLEFNAFCKSNGISRQLTAAYTPQQNGVAERKNRTIMNMVRSMLTEKQVPKSFWPE 181
            GEFTS EF  +CK NGI RQLTAAYTPQQNGVAERKNRT+MNMVRS+L EK VP+ FW E
Sbjct: 260  GEFTSNEFKEYCKMNGIKRQLTAAYTPQQNGVAERKNRTVMNMVRSLLVEKNVPRKFWAE 319

Query: 182  AVNWTVHVLNRSPTLAVKDMTPEEAWSGVKPNVDYFRVFGCIVHVHVPDNKRKKLDDKSF 361
            AVNW  +VLNR PT +VK+MTP EAW GVKP+V + RVFGCI + HVPD +R KL+DKS 
Sbjct: 320  AVNWAFYVLNRCPTSSVKEMTPVEAWCGVKPSVGHLRVFGCIAYAHVPDARRTKLEDKSR 379

Query: 362  KCVLLGMSEESKAYRLYDPVSKKIVVSRDVVFEENENWNWGTSNEETRFDVLEWSDSNXX 541
             CVL G+SEESKAYRLYDP SK+I++SRDVVFEE+  WNW   +EE      EW D    
Sbjct: 380  CCVLFGVSEESKAYRLYDPTSKRIIISRDVVFEEDGQWNWEKRSEEDNTFDTEWEDEKSE 439

Query: 542  XXXXXXXXXXXXXXXXXXXXXXTSLSLRESSGENSQTFGESLPSSPERRNRRAPFWMEDY 721
                                   +    E +  +      +     E RNRRAP WM DY
Sbjct: 440  EREESTDGNEEENATDSNEEENAAEGNEEENATDGNEDENAASPVSEHRNRRAPGWMNDY 499

Query: 722  VTGEEFSEEEIEHNLVLFTST--TDPATFDEAVQSSKWRAAMDLEIKAIERNETWELTDL 895
            V+GE  S+EE++  LVLF     +DP +FDEAV+  KWRAAMD E+K+IE+N TW+LT+L
Sbjct: 500  VSGEGLSDEEVQTQLVLFAHAVHSDPTSFDEAVKEVKWRAAMDAEMKSIEKNGTWDLTEL 559

Query: 896  PKGAKTIGVKWVFKTKLNENGEVDKCKARLVAKGYAQQYGIYYTEVFAPVARWDTIRMII 1075
            PK A+ IGVKWV+KTKLNE GEV+K KARLVAKGYAQ+YG+ Y EV+APVAR DT+RMI+
Sbjct: 560  PKEARKIGVKWVYKTKLNELGEVEKYKARLVAKGYAQEYGVDYEEVYAPVARMDTVRMIL 619

Query: 1076 ALAARNGWSVYQLDVKSAFLHGELNEAVFVEQPQGYEKKGEEHKVYRLKKALYGLKQAPR 1255
            ALAA+  W V+QLDVKSAFLHG+L E V+VEQP+GYE K EEHKVY+L KALYGLKQAPR
Sbjct: 620  ALAAQRSWCVFQLDVKSAFLHGKLAENVYVEQPRGYEIKNEEHKVYKLNKALYGLKQAPR 679

Query: 1256 AWYSRIEAYFAKEGFERYSCEHTLFIKTGDGGKILIVSLYVDDLIFTGNDEIMFIKFKNS 1435
            AW+SRIE+YF KEGFE+   E TLF K    GK LI+SLYVDDLI+TG+DE M  +FK S
Sbjct: 680  AWFSRIESYFRKEGFEKEDSEQTLFTKVKQ-GKHLIISLYVDDLIYTGDDEKMMSEFKES 738

Query: 1436 MKLEFDMTDLGKMKYFLGVE 1495
            M  EFDM+DLGKMKYFLG+E
Sbjct: 739  MMKEFDMSDLGKMKYFLGIE 758


>gb|PNX95763.1| retrotransposon-related protein, partial [Trifolium pratense]
          Length = 1327

 Score =  630 bits (1626), Expect = 0.0
 Identities = 315/499 (63%), Positives = 377/499 (75%), Gaps = 1/499 (0%)
 Frame = +2

Query: 2    GEFTSLEFNAFCKSNGISRQLTAAYTPQQNGVAERKNRTIMNMVRSMLTEKQVPKSFWPE 181
            GE+ S EF  FC ++GI+RQLTAAYTPQQNGVAERKNRTIMNMVRSML+EKQ+PK FW E
Sbjct: 563  GEYNSKEFTEFCSTHGINRQLTAAYTPQQNGVAERKNRTIMNMVRSMLSEKQMPKEFWAE 622

Query: 182  AVNWTVHVLNRSPTLAVKDMTPEEAWSGVKPNVDYFRVFGCIVHVHVPDNKRKKLDDKSF 361
            A NW++H+LNR PT A+++MTP+EAW+G KP VD+FR+FGC+ HVHVPD KR KLDDKS 
Sbjct: 623  AANWSIHILNRCPTTALENMTPQEAWTGCKPRVDHFRIFGCLAHVHVPDQKRIKLDDKSK 682

Query: 362  KCVLLGMSEESKAYRLYDPVSKKIVVSRDVVFEENENWNWGTSNEETRFDVLEWSDSNXX 541
              + LG+S+ESKAY+L+DP++KKI +SRDV FEEN  W W  S  E + DVL+  D N  
Sbjct: 683  THIFLGVSKESKAYKLFDPITKKITISRDVKFEENACWKWKQSKGEVQSDVLDLEDKNSD 742

Query: 542  XXXXXXXXXXXXXXXXXXXXXXTSLSLRESSGENSQTF-GESLPSSPERRNRRAPFWMED 718
                                  TS ++ ++ G +S T  G S P+SP  R RRAP WM D
Sbjct: 743  ANKELELEEDSDSNN-------TSNTISQTGGNSSTTSSGGSEPNSPTGRFRRAPGWMSD 795

Query: 719  YVTGEEFSEEEIEHNLVLFTSTTDPATFDEAVQSSKWRAAMDLEIKAIERNETWELTDLP 898
            Y  GE  SEEE E  +++  +  DP T++EA +  KWR AM  EI +IE+N TW LT LP
Sbjct: 796  YTPGEGLSEEEEEAMMMI--TEEDPVTYNEAAKEKKWRDAMAKEIDSIEKNGTWRLTTLP 853

Query: 899  KGAKTIGVKWVFKTKLNENGEVDKCKARLVAKGYAQQYGIYYTEVFAPVARWDTIRMIIA 1078
             G K IGVKW+FKTKLNE+G V+K KARLVAKGYAQQYGI YTEVFAPVAR DTIR+I+A
Sbjct: 854  SGVKAIGVKWIFKTKLNEHGNVEKYKARLVAKGYAQQYGIDYTEVFAPVARLDTIRLILA 913

Query: 1079 LAARNGWSVYQLDVKSAFLHGELNEAVFVEQPQGYEKKGEEHKVYRLKKALYGLKQAPRA 1258
             AA+N W VYQLDVKSAFL GEL E V+V+QP G+EKKGEE KVY+L KALYGLKQAPRA
Sbjct: 914  TAAQNKWEVYQLDVKSAFLQGELKEEVYVQQPTGFEKKGEEDKVYKLNKALYGLKQAPRA 973

Query: 1259 WYSRIEAYFAKEGFERYSCEHTLFIKTGDGGKILIVSLYVDDLIFTGNDEIMFIKFKNSM 1438
            WYSRIE+YF +EGFER + EHTLF K  +GGKILIVSLYVDDLI+TGN+E +  +FK SM
Sbjct: 974  WYSRIESYFIREGFERCASEHTLFTKEKEGGKILIVSLYVDDLIYTGNNESICEEFKMSM 1033

Query: 1439 KLEFDMTDLGKMKYFLGVE 1495
              EFDM+DLGKM YFLG+E
Sbjct: 1034 MHEFDMSDLGKMSYFLGME 1052


>gb|KYP74877.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1232

 Score =  627 bits (1618), Expect = 0.0
 Identities = 307/498 (61%), Positives = 373/498 (74%)
 Frame = +2

Query: 2    GEFTSLEFNAFCKSNGISRQLTAAYTPQQNGVAERKNRTIMNMVRSMLTEKQVPKSFWPE 181
            GEF+S  F  FC+S GI RQLTAAYTPQQNGVAERKNRTIMNMVRSML  +QVPK FWPE
Sbjct: 466  GEFSSKAFEEFCRSQGIKRQLTAAYTPQQNGVAERKNRTIMNMVRSMLIGRQVPKIFWPE 525

Query: 182  AVNWTVHVLNRSPTLAVKDMTPEEAWSGVKPNVDYFRVFGCIVHVHVPDNKRKKLDDKSF 361
            A  W VH+LNRSPT  V+D TPEEAWSGVKP+V YFRVFGC+ HVH  D +R KLDDKS 
Sbjct: 526  ATKWCVHILNRSPTAVVQDQTPEEAWSGVKPSVGYFRVFGCLAHVHTLDQQRIKLDDKSK 585

Query: 362  KCVLLGMSEESKAYRLYDPVSKKIVVSRDVVFEENENWNWGTSNEETRFDVLEWSDSNXX 541
            +CVL G+S+ESKAYRL+DPV+KKI++S+DV+FEE+++WNW  +  E + +++EW +    
Sbjct: 586  QCVLFGVSDESKAYRLFDPVNKKIIISKDVIFEEHKSWNWEQNKAENQLEIVEWEEHEGN 645

Query: 542  XXXXXXXXXXXXXXXXXXXXXXTSLSLRESSGENSQTFGESLPSSPERRNRRAPFWMEDY 721
                                     ++R  S  ++Q   E       RR+RR P WM DY
Sbjct: 646  STEIQFEDKSNNEEQQGTESQSAGTNVRNKS--HTQIL-EIPTKGRARRHRREPVWMTDY 702

Query: 722  VTGEEFSEEEIEHNLVLFTSTTDPATFDEAVQSSKWRAAMDLEIKAIERNETWELTDLPK 901
              GE  S   I +   +  + TDP T +EAV+S KWR AM  E++AIERN+TWELTD+PK
Sbjct: 703  EKGEGLSY--INNTSAMLVTETDPVTVEEAVKSKKWRDAMVKEMEAIERNQTWELTDVPK 760

Query: 902  GAKTIGVKWVFKTKLNENGEVDKCKARLVAKGYAQQYGIYYTEVFAPVARWDTIRMIIAL 1081
            G K IGVKWVFKTK  ENGE+DK KARLVAKGYAQ YG+ YTEVFAPVA+ DTIR+I+++
Sbjct: 761  GVKPIGVKWVFKTKHKENGEIDKFKARLVAKGYAQHYGVDYTEVFAPVAKVDTIRIILSM 820

Query: 1082 AARNGWSVYQLDVKSAFLHGELNEAVFVEQPQGYEKKGEEHKVYRLKKALYGLKQAPRAW 1261
            AA+NGW ++QLDVKSAFLHGEL E ++V+QP  + KKG+E KVY+L+KALYGLKQAPRAW
Sbjct: 821  AAQNGWIIFQLDVKSAFLHGELKEEIYVQQPAEFIKKGKEEKVYKLRKALYGLKQAPRAW 880

Query: 1262 YSRIEAYFAKEGFERYSCEHTLFIKTGDGGKILIVSLYVDDLIFTGNDEIMFIKFKNSMK 1441
            Y+RIEAYF + GFER  CEHTLF K+ +GGKILIVSLYVDDLI+TGND  M   F+N M 
Sbjct: 881  YNRIEAYFLQNGFERCFCEHTLFTKSAEGGKILIVSLYVDDLIYTGNDGSMCNDFRNIMM 940

Query: 1442 LEFDMTDLGKMKYFLGVE 1495
             +FDMTDLGKM+YFLG+E
Sbjct: 941  SKFDMTDLGKMRYFLGIE 958


>gb|PNY07765.1| putative copia-type polyprotein [Trifolium pratense]
          Length = 1321

 Score =  629 bits (1621), Expect = 0.0
 Identities = 317/501 (63%), Positives = 377/501 (75%), Gaps = 3/501 (0%)
 Frame = +2

Query: 2    GEFTSLEFNAFCKSNGISRQLTAAYTPQQNGVAERKNRTIMNMVRSMLTEKQVPKSFWPE 181
            GE+TS EF   C+SNGI RQLTAAYTP QNGV+ER+N TIMNMVRSMLT K VPK+FWPE
Sbjct: 564  GEYTSSEFVNLCESNGIKRQLTAAYTPHQNGVSERRNITIMNMVRSMLTNKNVPKTFWPE 623

Query: 182  AVNWTVHVLNRSPTLAVKDMTPEEAWSGVKPNVDYFRVFGCIVHVHVPDNKRKKLDDKSF 361
            AVNW+VH+LNR PT +VK+MTPEEAW G KP VD+FRVFG I +VHVPD KRKKLD+K  
Sbjct: 624  AVNWSVHILNRCPTFSVKNMTPEEAWCGHKPAVDHFRVFGSIAYVHVPDQKRKKLDNKGE 683

Query: 362  KCVLLGMSEESKAYRLYDPVSKKIVVSRDVVFEENENWNWGTSNEETRFDVLEWSDSNXX 541
            KCVLLG+SEESKAYRLY+P++KKI +S+DVVF+EN +WNW   ++E     LE  D    
Sbjct: 684  KCVLLGVSEESKAYRLYNPLTKKICISKDVVFDENNSWNWENLDKEKSV-ALELEDHESV 742

Query: 542  XXXXXXXXXXXXXXXXXXXXXXTSLSLRESSGENSQTFG-ESLPSSPE--RRNRRAPFWM 712
                                      +RE S E     G E+  +S +  +R RR P WM
Sbjct: 743  EAENDAH------------------GVREESNELESDHGSETAETSLQNMQRPRRKPGWM 784

Query: 713  EDYVTGEEFSEEEIEHNLVLFTSTTDPATFDEAVQSSKWRAAMDLEIKAIERNETWELTD 892
            +DY +GEEFSEEE   +  L   + DP  FDEA++SS+WR AMD EI+AIE+N TWEL +
Sbjct: 785  DDYTSGEEFSEEETLAHFALLAGS-DPIAFDEAIKSSRWRKAMDAEIEAIEKNNTWELVE 843

Query: 893  LPKGAKTIGVKWVFKTKLNENGEVDKCKARLVAKGYAQQYGIYYTEVFAPVARWDTIRMI 1072
            LPKG K +GVKW++KTK+NE GE+DK KARLVAKGY Q+YGI Y+EVFAPVAR DTIRM+
Sbjct: 844  LPKGEKAVGVKWIYKTKVNEKGEIDKFKARLVAKGYTQKYGIDYSEVFAPVARHDTIRMV 903

Query: 1073 IALAARNGWSVYQLDVKSAFLHGELNEAVFVEQPQGYEKKGEEHKVYRLKKALYGLKQAP 1252
            IALAA N W+V+QLDVKSAFLHGEL E VFVEQP GY KK  +H VY+LK+ALYGLKQAP
Sbjct: 904  IALAALNNWTVFQLDVKSAFLHGELVEQVFVEQPPGYVKKESKHMVYKLKRALYGLKQAP 963

Query: 1253 RAWYSRIEAYFAKEGFERYSCEHTLFIKTGDGGKILIVSLYVDDLIFTGNDEIMFIKFKN 1432
            RAWYSRI+AYF++ GF +   EHTL+IKTG+ G  LIV LYVDDLIFTGNDE +F +FK 
Sbjct: 964  RAWYSRIDAYFSQTGFHKCPYEHTLYIKTGEKGNFLIVCLYVDDLIFTGNDECLFKEFKQ 1023

Query: 1433 SMKLEFDMTDLGKMKYFLGVE 1495
            SM  EF+MTDLG MKYFLG+E
Sbjct: 1024 SMMKEFEMTDLGMMKYFLGIE 1044


>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
          Length = 1187

 Score =  623 bits (1606), Expect = 0.0
 Identities = 320/510 (62%), Positives = 372/510 (72%), Gaps = 12/510 (2%)
 Frame = +2

Query: 2    GEFTSLEFNAFCKSNGISRQLTAAYTPQQNGVAERKNRTIMNMVRSMLTEKQVPKSFWPE 181
            GEFTS+EFN FCKS+GI RQLTAAY+PQQNGVAER+NRTIMN+VRS+L+EK+VPKS+WPE
Sbjct: 434  GEFTSIEFNEFCKSSGIKRQLTAAYSPQQNGVAERRNRTIMNLVRSVLSEKRVPKSYWPE 493

Query: 182  AVNWTVHVLNRSPTLAVKDMTPEEAWSGVKPNVDYFRVFGCIVHVHVPDNKRKKLDDKSF 361
            AV W  HVLNRSPTL V+D+TPEEAWSG+KPNVDYFRVFGCI H H+PD KR K DDKS 
Sbjct: 494  AVKWITHVLNRSPTLVVQDVTPEEAWSGIKPNVDYFRVFGCIAHAHIPDAKRTKFDDKSC 553

Query: 362  KCVLLGMSEESKAYRLYDPVSKKIVVSRDVVFEENENWNWGTSNEETRFDVLEWSDSNXX 541
            KCV LG ++                    V   E        S EE + DVL W DS   
Sbjct: 554  KCVFLGRTQ--------------------VGIGEG-------SIEEEKQDVLVWGDSE-- 584

Query: 542  XXXXXXXXXXXXXXXXXXXXXXTSLSLRESSGENSQTFGESLPSS-----------PERR 688
                                    +   +SSG +S +   S+PSS            E R
Sbjct: 585  ----ENEQAQSEEETDGVVAQDDGVVPNQSSGSSSSSNNGSIPSSCQGSPQSPQIVDEER 640

Query: 689  NRRAPFWMEDYVTGEEFSEEEIE-HNLVLFTSTTDPATFDEAVQSSKWRAAMDLEIKAIE 865
            NRR P WM+ YV+GE  SEEE E HNL +FT + DP++F+EAV  S+WR AM  EI+AIE
Sbjct: 641  NRRQPIWMQGYVSGEGLSEEEQELHNLAVFTPSDDPSSFEEAVVHSRWREAMRAEIEAIE 700

Query: 866  RNETWELTDLPKGAKTIGVKWVFKTKLNENGEVDKCKARLVAKGYAQQYGIYYTEVFAPV 1045
             N+TW+LT LPKG K IGVKWVFKTK NE+G+VDKCKARLVAKGYAQQ+GI YTEV+APV
Sbjct: 701  TNDTWQLTSLPKGVKKIGVKWVFKTKYNEHGKVDKCKARLVAKGYAQQFGIDYTEVYAPV 760

Query: 1046 ARWDTIRMIIALAARNGWSVYQLDVKSAFLHGELNEAVFVEQPQGYEKKGEEHKVYRLKK 1225
            ARWDTIR+I+ALAA+  W+++QLDVKSAFLHGELNE V++EQPQG+E+KGEE KVY+LKK
Sbjct: 761  ARWDTIRLIVALAAQKNWTIFQLDVKSAFLHGELNEDVYIEQPQGFEQKGEEEKVYKLKK 820

Query: 1226 ALYGLKQAPRAWYSRIEAYFAKEGFERYSCEHTLFIKTGDGGKILIVSLYVDDLIFTGND 1405
            ALYGLKQAPRAWYSRIE YF KEGFER S EHTLF+K    GK+LIVSLYVDD IFTGND
Sbjct: 821  ALYGLKQAPRAWYSRIEGYFVKEGFERCSYEHTLFVKIEGEGKMLIVSLYVDDQIFTGND 880

Query: 1406 EIMFIKFKNSMKLEFDMTDLGKMKYFLGVE 1495
              M  KFK+SM  EF+MTDLG+MKYFLGVE
Sbjct: 881  MSMIEKFKSSMMHEFEMTDLGEMKYFLGVE 910


>dbj|GAU26746.1| hypothetical protein TSUD_317440 [Trifolium subterraneum]
          Length = 1608

 Score =  633 bits (1633), Expect = 0.0
 Identities = 307/498 (61%), Positives = 380/498 (76%)
 Frame = +2

Query: 2    GEFTSLEFNAFCKSNGISRQLTAAYTPQQNGVAERKNRTIMNMVRSMLTEKQVPKSFWPE 181
            GEF S EF  FCK  GI RQLTA+YTPQQNGVAERKNRTIMN VR++L E+QVP+ FWPE
Sbjct: 567  GEFISNEFEEFCKDQGICRQLTASYTPQQNGVAERKNRTIMNAVRAVLNERQVPRVFWPE 626

Query: 182  AVNWTVHVLNRSPTLAVKDMTPEEAWSGVKPNVDYFRVFGCIVHVHVPDNKRKKLDDKSF 361
            AV W VHV NRSPT AV  +TPEEAW+GV+P+VDYFR+FGC+ H HVPD KR KLDDKS 
Sbjct: 627  AVKWCVHVQNRSPTSAVDHITPEEAWTGVRPSVDYFRIFGCVAHAHVPDQKRSKLDDKSK 686

Query: 362  KCVLLGMSEESKAYRLYDPVSKKIVVSRDVVFEENENWNWGTSNEETRFDVLEWSDSNXX 541
            +CV LG+S+ESKAY+L+DP+ KK++V+RDVVFEE+++W+WG + EE + DVL+W ++   
Sbjct: 687  RCVFLGVSDESKAYKLFDPIEKKVIVNRDVVFEEDKSWDWGRTEEECKVDVLDWEENEED 746

Query: 542  XXXXXXXXXXXXXXXXXXXXXXTSLSLRESSGENSQTFGESLPSSPERRNRRAPFWMEDY 721
                                   S   +  S  N     E        R+RR P W+ D+
Sbjct: 747  GEDHGTAQNEEENSGDINQGASPSSLNKTGSPTNETNDVEQEFLERAARSRRRPGWLVDF 806

Query: 722  VTGEEFSEEEIEHNLVLFTSTTDPATFDEAVQSSKWRAAMDLEIKAIERNETWELTDLPK 901
                  SEEE    ++   + +DP  F+EA +S+KWR AM++E+KAIE+N+TW LTD P+
Sbjct: 807  EEDPNLSEEESLMVMMTAENGSDPYLFEEAFKSAKWREAMNMEMKAIEKNKTWVLTDAPR 866

Query: 902  GAKTIGVKWVFKTKLNENGEVDKCKARLVAKGYAQQYGIYYTEVFAPVARWDTIRMIIAL 1081
            G K IGVKW+FKTKLNE+G+V+K KARLVAKGYAQQYG+ YTEVFAPVAR DT+R+++AL
Sbjct: 867  GVKPIGVKWIFKTKLNESGKVEKFKARLVAKGYAQQYGVDYTEVFAPVARLDTVRVLLAL 926

Query: 1082 AARNGWSVYQLDVKSAFLHGELNEAVFVEQPQGYEKKGEEHKVYRLKKALYGLKQAPRAW 1261
            AA+ GW V+QLDVKSAFLHGEL E VFV+QP+G+ KKGEE+KVY+LKKALYGLKQAPRAW
Sbjct: 927  AAQRGWEVFQLDVKSAFLHGELKEEVFVQQPEGFVKKGEENKVYKLKKALYGLKQAPRAW 986

Query: 1262 YSRIEAYFAKEGFERYSCEHTLFIKTGDGGKILIVSLYVDDLIFTGNDEIMFIKFKNSMK 1441
            Y++IEAYFAKE FER S EHTLF K  + G ILIVSLYVDDLIFTGN++ M  +FK+SMK
Sbjct: 987  YNKIEAYFAKENFERCSSEHTLFTKKNE-GNILIVSLYVDDLIFTGNNKRMCDEFKSSMK 1045

Query: 1442 LEFDMTDLGKMKYFLGVE 1495
            L+FDMTDLG+M+YFLG+E
Sbjct: 1046 LDFDMTDLGRMRYFLGIE 1063


>emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]
          Length = 1265

 Score =  622 bits (1605), Expect = 0.0
 Identities = 315/498 (63%), Positives = 365/498 (73%)
 Frame = +2

Query: 2    GEFTSLEFNAFCKSNGISRQLTAAYTPQQNGVAERKNRTIMNMVRSMLTEKQVPKSFWPE 181
            GEFTS EF  FC  NGI RQLTAAYTPQQN V ERKNRTIMNMVRSM++EK++PK FWPE
Sbjct: 544  GEFTSXEFTNFCDVNGIRRQLTAAYTPQQNXVXERKNRTIMNMVRSMISEKKIPKPFWPE 603

Query: 182  AVNWTVHVLNRSPTLAVKDMTPEEAWSGVKPNVDYFRVFGCIVHVHVPDNKRKKLDDKSF 361
            AVNWTVHVLNRSPTLAV++ TP EAWSGVKP+V++FRVFGCI HVHVPDNKR KLDDKS 
Sbjct: 604  AVNWTVHVLNRSPTLAVQNKTPXEAWSGVKPSVEHFRVFGCISHVHVPDNKRTKLDDKSL 663

Query: 362  KCVLLGMSEESKAYRLYDPVSKKIVVSRDVVFEENENWNWGTSNEETRFDVLEWSDSNXX 541
             CVLLG+SE                   DVVFEE++NW+W  + E++    LEW D    
Sbjct: 664  SCVLLGVSEG------------------DVVFEEHKNWDWDKTYEKSIVCDLEWGDLEEE 705

Query: 542  XXXXXXXXXXXXXXXXXXXXXXTSLSLRESSGENSQTFGESLPSSPERRNRRAPFWMEDY 721
                                    +   E +  +     +S PSS   R RR P WM DY
Sbjct: 706  ATMFDENEEGTESDLE------ADIEAEEDNFSSDSLTEDSSPSSTAERIRRPPAWMRDY 759

Query: 722  VTGEEFSEEEIEHNLVLFTSTTDPATFDEAVQSSKWRAAMDLEIKAIERNETWELTDLPK 901
              GE  SEE+ E +L +F +  DP  F++AV+S KW+ AMDLE+ AI +N TWELT+LP+
Sbjct: 760  DIGEGLSEEDNEAHLAMFAAA-DPIHFEDAVKSEKWKKAMDLELAAINKNGTWELTELPE 818

Query: 902  GAKTIGVKWVFKTKLNENGEVDKCKARLVAKGYAQQYGIYYTEVFAPVARWDTIRMIIAL 1081
            G K IGVKW++KTK NENGEVDK KARLVAKGY QQ+G+ YTEVFAPVAR +TIR+++AL
Sbjct: 819  GGKKIGVKWIYKTKFNENGEVDKYKARLVAKGYTQQHGVDYTEVFAPVARMETIRLVVAL 878

Query: 1082 AARNGWSVYQLDVKSAFLHGELNEAVFVEQPQGYEKKGEEHKVYRLKKALYGLKQAPRAW 1261
            AA+  W++YQLDVKSAFLHGELNE VFVEQP GY +KG E KVY+LKKALYGLKQAP AW
Sbjct: 879  AAQRKWTIYQLDVKSAFLHGELNEEVFVEQPCGYVQKGHEQKVYKLKKALYGLKQAPXAW 938

Query: 1262 YSRIEAYFAKEGFERYSCEHTLFIKTGDGGKILIVSLYVDDLIFTGNDEIMFIKFKNSMK 1441
            YS IEAYF KEGFE+   EHTLFIKT   GK+LIVSLYVDDLIFTGNDE+MF  FK SMK
Sbjct: 939  YSXIEAYFMKEGFEKCDYEHTLFIKTRKEGKVLIVSLYVDDLIFTGNDELMFTDFKRSMK 998

Query: 1442 LEFDMTDLGKMKYFLGVE 1495
             EFDMTDLGKM+YFLG+E
Sbjct: 999  DEFDMTDLGKMRYFLGLE 1016


>gb|PNX96091.1| retrotransposon-related protein [Trifolium pratense]
          Length = 1326

 Score =  619 bits (1597), Expect = 0.0
 Identities = 308/499 (61%), Positives = 378/499 (75%), Gaps = 1/499 (0%)
 Frame = +2

Query: 2    GEFTSLEFNAFCKSNGISRQLTAAYTPQQNGVAERKNRTIMNMVRSMLTEKQVPKSFWPE 181
            GEF S EFN FCK +G+ RQLT AYTPQQNGVAERKNRT+MNMVRS+L +K +PK+FWPE
Sbjct: 561  GEFNSNEFNDFCKQSGVKRQLTTAYTPQQNGVAERKNRTVMNMVRSLLFDKNIPKTFWPE 620

Query: 182  AVNWTVHVLNRSPTLAVKDMTPEEAWSGVKPNVDYFRVFGCIVHVHVPDNKRKKLDDKSF 361
            AVNWT++VLNR PTLAVKD+TPEEAWSGVKP+V++FRVFGCI HVHVP+ KR KLD +S 
Sbjct: 621  AVNWTIYVLNRCPTLAVKDVTPEEAWSGVKPSVNHFRVFGCIAHVHVPEAKRTKLDSRSI 680

Query: 362  KCVLLGMSEESKAYRLYDPVSKKIVVSRDVVFEENENWNWGTSNEETRFDVLEWSDS-NX 538
             CVLLG+SEESK YR +DPVSKKIVVSRDV+FEE++ W+W    E+     LEW+D  N 
Sbjct: 681  TCVLLGVSEESKGYRFFDPVSKKIVVSRDVIFEEDKQWDW---EEKQTVADLEWNDGENE 737

Query: 539  XXXXXXXXXXXXXXXXXXXXXXXTSLSLRESSGENSQTFGESLPSSPERRNRRAPFWMED 718
                                       +RE   ++++  GE +    E R RR P WM D
Sbjct: 738  ERVSENDNEERVSENDNQGNVEKEREVIREEEHDSNE--GEEIVK--EYRERRPPGWMSD 793

Query: 719  YVTGEEFSEEEIEHNLVLFTSTTDPATFDEAVQSSKWRAAMDLEIKAIERNETWELTDLP 898
            + +GE  SE+E    L++   + DP  F+EAV+S  WR AM+ EIK+IE+N+TW LT+LP
Sbjct: 794  FESGEGLSEDEAHMALMV---SIDPLCFEEAVKSENWRLAMEKEIKSIEKNQTWTLTELP 850

Query: 899  KGAKTIGVKWVFKTKLNENGEVDKCKARLVAKGYAQQYGIYYTEVFAPVARWDTIRMIIA 1078
             GAK IGVKWV+KTK NE+G++DK KARLVAKGY+Q++G+ YTEV+APVAR DTIRMIIA
Sbjct: 851  AGAKRIGVKWVYKTKYNEHGKIDKYKARLVAKGYSQKHGVDYTEVYAPVARMDTIRMIIA 910

Query: 1079 LAARNGWSVYQLDVKSAFLHGELNEAVFVEQPQGYEKKGEEHKVYRLKKALYGLKQAPRA 1258
            +AA   W ++QLDVKSAFLHG+L+E V+VEQP+GYEK G EH VY+L KALYGLKQAPRA
Sbjct: 911  IAAHKNWQIFQLDVKSAFLHGKLDEDVYVEQPRGYEKIGSEHLVYKLHKALYGLKQAPRA 970

Query: 1259 WYSRIEAYFAKEGFERYSCEHTLFIKTGDGGKILIVSLYVDDLIFTGNDEIMFIKFKNSM 1438
            W+SRIEA+F  EGF+    E TLF K  + GKI+IVS+YVDDLIFTGN E+M  +FKNSM
Sbjct: 971  WFSRIEAHFIGEGFQMCDSEQTLFTKRSNEGKIIIVSVYVDDLIFTGNCEVMMSEFKNSM 1030

Query: 1439 KLEFDMTDLGKMKYFLGVE 1495
              EFDM+DLGKM+YFLG+E
Sbjct: 1031 LREFDMSDLGKMRYFLGIE 1049


>gb|PNY15642.1| copia-type polyprotein [Trifolium pratense]
          Length = 822

 Score =  598 bits (1543), Expect = 0.0
 Identities = 301/500 (60%), Positives = 373/500 (74%), Gaps = 2/500 (0%)
 Frame = +2

Query: 2    GEFTSLEFNAFCKSNGISRQLTAAYTPQQNGVAERKNRTIMNMVRSMLTEKQVPKSFWPE 181
            GEFTS  FN FC S GI RQLTAAYTPQQNGV+ERKNRTI+NMVRSML  ++VPK+FWPE
Sbjct: 52   GEFTSNAFNDFCSSKGIKRQLTAAYTPQQNGVSERKNRTILNMVRSMLAAREVPKNFWPE 111

Query: 182  AVNWTVHVLNRSPTLAVKDMTPEEAWSGVKPNVDYFRVFGCIVHVHVPDNKRKKLDDKSF 361
            AV W  +V+NRSPT AV+DMTPEEAWSGVKP+V +FRVFGC+ HVHVPD +RKKLD KS 
Sbjct: 112  AVKWATYVMNRSPTFAVQDMTPEEAWSGVKPSVHHFRVFGCLAHVHVPDVQRKKLDGKSV 171

Query: 362  KCVLLGMSEESKAYRLYDPVSKKIVVSRDVVFEENENWNWGTSNEETRFDVLEWSDSNXX 541
            KC+ LG+SEESKAY+LY+P  KKI+VSRDV+FEE + WNW   N ++       SDS   
Sbjct: 172  KCIHLGLSEESKAYKLYNPNEKKIIVSRDVIFEEQKGWNWKKKNYKSPIIHDTESDSEVA 231

Query: 542  XXXXXXXXXXXXXXXXXXXXXXTSLSLRESSGENSQTFGESLPSSPERRNRRAPFWMEDY 721
                                  T  S  E+   ++   G +LP     R RR P ++EDY
Sbjct: 232  AQENHPVAPEGNQSDDAEIDMDTQASDTENEDSDNDN-GNNLPP----RTRRPPGYLEDY 286

Query: 722  --VTGEEFSEEEIEHNLVLFTSTTDPATFDEAVQSSKWRAAMDLEIKAIERNETWELTDL 895
               TGEE  +E +  +  LF+S  DP ++++A++   W+ AM+ EI++I +N+TWELT L
Sbjct: 287  DTTTGEE--QENMIQHFALFSSKEDPESYEDAIKIDVWKKAMESEIESINKNDTWELTTL 344

Query: 896  PKGAKTIGVKWVFKTKLNENGEVDKCKARLVAKGYAQQYGIYYTEVFAPVARWDTIRMII 1075
            PKGAK IGVKW+FKTK NE G ++K KARLVAKGYAQ+YG+ ++EVFAPVARWDTIR I+
Sbjct: 345  PKGAKAIGVKWIFKTKYNEEGRIEKHKARLVAKGYAQKYGVDFSEVFAPVARWDTIRTIL 404

Query: 1076 ALAARNGWSVYQLDVKSAFLHGELNEAVFVEQPQGYEKKGEEHKVYRLKKALYGLKQAPR 1255
            +LAA   W ++QLDVKSAFLHGEL E V+V+QP G++  GE+++VY+LKKALYGLKQAPR
Sbjct: 405  SLAASKNWCIFQLDVKSAFLHGELLENVYVQQPLGFQ-VGEKNQVYKLKKALYGLKQAPR 463

Query: 1256 AWYSRIEAYFAKEGFERYSCEHTLFIKTGDGGKILIVSLYVDDLIFTGNDEIMFIKFKNS 1435
            AWYS+I++YF  E F + S EHTLF+K G+ GKILIVSLYVDDLI+TGND+ M  +FK S
Sbjct: 464  AWYSKIQSYFDTEKFMKCSHEHTLFVKYGEKGKILIVSLYVDDLIYTGNDKQMMEEFKGS 523

Query: 1436 MKLEFDMTDLGKMKYFLGVE 1495
            MK +F MTDLGKMKYFLGVE
Sbjct: 524  MKKKFAMTDLGKMKYFLGVE 543


>gb|PNX94698.1| copia-type polyprotein [Trifolium pratense]
          Length = 1324

 Score =  605 bits (1560), Expect = 0.0
 Identities = 307/499 (61%), Positives = 367/499 (73%), Gaps = 1/499 (0%)
 Frame = +2

Query: 2    GEFTSLEFNAFCKSNGISRQLTAAYTPQQNGVAERKNRTIMNMVRSMLTEKQVPKSFWPE 181
            GEFTS  FN FC  NGI RQLT AYTPQQNGV+ERKNRT++NMVRSML  + VPK FWPE
Sbjct: 561  GEFTSEIFNNFCSENGIKRQLTTAYTPQQNGVSERKNRTLLNMVRSMLAGRNVPKKFWPE 620

Query: 182  AVNWTVHVLNRSPTLAVKDMTPEEAWSGVKPNVDYFRVFGCIVHVHVPDNKRKKLDDKSF 361
            AV W  +VLNRSPTL+VKD TPEEAWSG+KP+V +F++FGC+ +VHVPD KR KLD KS 
Sbjct: 621  AVKWATYVLNRSPTLSVKDSTPEEAWSGLKPSVHHFKIFGCLAYVHVPDAKRTKLDAKSL 680

Query: 362  KCVLLGMSEESKAYRLYDPVSKKIVVSRDVVFEENENWNWGTSNEETRFDVLEWSDSNXX 541
            KCV LG+SEESKAY+LYDPV+KKI+VSRDVVFEE   WNW    +         S SN  
Sbjct: 681  KCVHLGVSEESKAYKLYDPVNKKIIVSRDVVFEEGTEWNWNDKKKAAA------SSSNNN 734

Query: 542  XXXXXXXXXXXXXXXXXXXXXXTSLSLRESSGE-NSQTFGESLPSSPERRNRRAPFWMED 718
                                   S S  +S  E N     E LP  P+++    P ++ D
Sbjct: 735  DLISDETDIEEEAKNGVNTGNNESSSEYDSEQEGNDYETEEELPPRPKKK----PGYLND 790

Query: 719  YVTGEEFSEEEIEHNLVLFTSTTDPATFDEAVQSSKWRAAMDLEIKAIERNETWELTDLP 898
            YVTG    E+E  +NL +F++  DP T+DEA +   WR AMD EI++IE N+TW+LT LP
Sbjct: 791  YVTGLTDEEQEQMNNLAVFSTNGDPTTYDEAHKQEVWRKAMDQEIESIENNKTWKLTSLP 850

Query: 899  KGAKTIGVKWVFKTKLNENGEVDKCKARLVAKGYAQQYGIYYTEVFAPVARWDTIRMIIA 1078
            +GAKTIGVKW++KTK NE GEV+K KARLVAKGY+QQYGI Y EVFAPVARWDTIR ++ 
Sbjct: 851  QGAKTIGVKWIYKTKYNEKGEVEKYKARLVAKGYSQQYGIDYNEVFAPVARWDTIRTLLC 910

Query: 1079 LAARNGWSVYQLDVKSAFLHGELNEAVFVEQPQGYEKKGEEHKVYRLKKALYGLKQAPRA 1258
            +AA  GW V+QLDVKSAFLHGEL E V+VEQP GY+   E+ KVY+L+KALYGLKQAPRA
Sbjct: 911  IAASKGWEVHQLDVKSAFLHGELTEDVYVEQPLGYQTT-EKDKVYKLQKALYGLKQAPRA 969

Query: 1259 WYSRIEAYFAKEGFERYSCEHTLFIKTGDGGKILIVSLYVDDLIFTGNDEIMFIKFKNSM 1438
            WYS+IE+YF +E F++   EHTLF+K  DG KILIVSLYVDDLI+TGND+++F +FK SM
Sbjct: 970  WYSKIESYFCQEKFDKCQNEHTLFVKQ-DGDKILIVSLYVDDLIYTGNDKMLFEEFKISM 1028

Query: 1439 KLEFDMTDLGKMKYFLGVE 1495
            K  F MTDLGKMKYFLGVE
Sbjct: 1029 KRNFAMTDLGKMKYFLGVE 1047


>gb|PNX95204.1| copia-type polyprotein [Trifolium pratense]
          Length = 1328

 Score =  605 bits (1560), Expect = 0.0
 Identities = 297/498 (59%), Positives = 376/498 (75%)
 Frame = +2

Query: 2    GEFTSLEFNAFCKSNGISRQLTAAYTPQQNGVAERKNRTIMNMVRSMLTEKQVPKSFWPE 181
            GEF S  FN +C   GI RQLT AYTPQQNGV+ERKNRTIMNMVR ML +K+VPK FWPE
Sbjct: 561  GEFMSEAFNKYCTEQGIKRQLTTAYTPQQNGVSERKNRTIMNMVRCMLNDKKVPKKFWPE 620

Query: 182  AVNWTVHVLNRSPTLAVKDMTPEEAWSGVKPNVDYFRVFGCIVHVHVPDNKRKKLDDKSF 361
            +V W V+VLNRSPTL+VKD+TPEEAWS +KP+V +F++FGC+  VHVPD +RKKLD+KS 
Sbjct: 621  SVKWAVYVLNRSPTLSVKDVTPEEAWSSMKPSVKHFKIFGCLAFVHVPDAQRKKLDNKST 680

Query: 362  KCVLLGMSEESKAYRLYDPVSKKIVVSRDVVFEENENWNWGTSNEETRFDVLEWSDSNXX 541
            KC+ LG+SEESKAY+LY+P+ +KI++SRDVVF+E++ WNWG ++E  +  +    D++  
Sbjct: 681  KCIHLGVSEESKAYKLYNPIDRKIIISRDVVFDESKGWNWGEASETQQKTLY---DNDDE 737

Query: 542  XXXXXXXXXXXXXXXXXXXXXXTSLSLRESSGENSQTFGESLPSSPERRNRRAPFWMEDY 721
                                   +L++ +S  +      + LP    +R    P ++ DY
Sbjct: 738  PAEIAEEADTDVNDDVNNEQDPQNLTVPDSESDEQYESEDELPPRVIKR----PGYLSDY 793

Query: 722  VTGEEFSEEEIEHNLVLFTSTTDPATFDEAVQSSKWRAAMDLEIKAIERNETWELTDLPK 901
            VTG+E  EEE  HNL +F + TDP TFDEAV+   WR AMD EI+ IE N+TWELT+LP 
Sbjct: 794  VTGQELEEEEQLHNLAVFCNNTDPTTFDEAVKHEVWRKAMDQEIECIESNDTWELTELPS 853

Query: 902  GAKTIGVKWVFKTKLNENGEVDKCKARLVAKGYAQQYGIYYTEVFAPVARWDTIRMIIAL 1081
            G+K IGVKW++KTKLNE G+V+K KARLVAKGY+QQYGI + EVFAPVARWDTIR ++++
Sbjct: 854  GSKKIGVKWIYKTKLNEKGKVEKYKARLVAKGYSQQYGIDFKEVFAPVARWDTIRTVLSI 913

Query: 1082 AARNGWSVYQLDVKSAFLHGELNEAVFVEQPQGYEKKGEEHKVYRLKKALYGLKQAPRAW 1261
            AA   W+VYQLDVKSAFLHGEL+E V+V+QP GY+ KG++ +VY+LKKALYGL+QAPRAW
Sbjct: 914  AASESWTVYQLDVKSAFLHGELSEDVYVDQPLGYQ-KGKKSQVYKLKKALYGLRQAPRAW 972

Query: 1262 YSRIEAYFAKEGFERYSCEHTLFIKTGDGGKILIVSLYVDDLIFTGNDEIMFIKFKNSMK 1441
            YS+IEAYF+ E FE+ S EHTLF+K  +  KILIVSLYVDDLI+TGND+ +   FK+SMK
Sbjct: 973  YSKIEAYFSNEKFEKCSHEHTLFVKQVE-EKILIVSLYVDDLIYTGNDDELIRDFKSSMK 1031

Query: 1442 LEFDMTDLGKMKYFLGVE 1495
              F MTDLGKM YFLGVE
Sbjct: 1032 RNFAMTDLGKMSYFLGVE 1049


>gb|PNX89974.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 415

 Score =  574 bits (1479), Expect = 0.0
 Identities = 280/419 (66%), Positives = 334/419 (79%)
 Frame = +2

Query: 2    GEFTSLEFNAFCKSNGISRQLTAAYTPQQNGVAERKNRTIMNMVRSMLTEKQVPKSFWPE 181
            GEFTS EFN+FC S+GI RQLTAA+TPQQNGVAERKN+TIMNMVR ML+EK +PK  W E
Sbjct: 19   GEFTSHEFNSFCSSHGIKRQLTAAFTPQQNGVAERKNQTIMNMVRCMLSEKHLPKFLWGE 78

Query: 182  AVNWTVHVLNRSPTLAVKDMTPEEAWSGVKPNVDYFRVFGCIVHVHVPDNKRKKLDDKSF 361
            AVNW VH+LNRSPTLAVKD TPEEAWS +KP V Y +VFGC+ HVH+P+ KRKKLD KSF
Sbjct: 79   AVNWAVHILNRSPTLAVKDKTPEEAWSDIKPAVHYLKVFGCVAHVHIPEAKRKKLDAKSF 138

Query: 362  KCVLLGMSEESKAYRLYDPVSKKIVVSRDVVFEENENWNWGTSNEETRFDVLEWSDSNXX 541
            +CV+LG+S+ESKAYRL+DP +K+IV+S+DV+FEENE W+W  S E+ + D+L+W +S   
Sbjct: 139  RCVMLGISDESKAYRLFDPTTKRIVISKDVIFEENECWDWERSPEQMKPDLLDWGESEEE 198

Query: 542  XXXXXXXXXXXXXXXXXXXXXXTSLSLRESSGENSQTFGESLPSSPERRNRRAPFWMEDY 721
                                   +  +RE  G +S    E  P   E R RR P WM+DY
Sbjct: 199  RNE-------------------NTEEVREGMGSSSSLSSEEAPI--EGRVRRPPGWMQDY 237

Query: 722  VTGEEFSEEEIEHNLVLFTSTTDPATFDEAVQSSKWRAAMDLEIKAIERNETWELTDLPK 901
             +GEEFSEEEI+ NLV+FT  +DP TF+EAV+S KWR AM+ E++AIE+N TWELTDLP 
Sbjct: 238  TSGEEFSEEEIQ-NLVMFTVASDPTTFEEAVKSEKWRNAMNNEMEAIEKNNTWELTDLPT 296

Query: 902  GAKTIGVKWVFKTKLNENGEVDKCKARLVAKGYAQQYGIYYTEVFAPVARWDTIRMIIAL 1081
            GAKTIG+KW+FKTKLNENGEV+K KARLVAKGY+QQYG+ YTEVFAPVARWDTIRM+IAL
Sbjct: 297  GAKTIGLKWIFKTKLNENGEVEKYKARLVAKGYSQQYGVDYTEVFAPVARWDTIRMVIAL 356

Query: 1082 AARNGWSVYQLDVKSAFLHGELNEAVFVEQPQGYEKKGEEHKVYRLKKALYGLKQAPRA 1258
            AA+ GW+VYQLDVKSAFLHGELNE VFV+QPQGY KKG+E KVY+LK+ALYGLKQAPRA
Sbjct: 357  AAQKGWNVYQLDVKSAFLHGELNEQVFVDQPQGYVKKGDELKVYKLKRALYGLKQAPRA 415


>gb|KOM33859.1| hypothetical protein LR48_Vigan02g000900 [Vigna angularis]
          Length = 1349

 Score =  605 bits (1559), Expect = 0.0
 Identities = 301/504 (59%), Positives = 367/504 (72%), Gaps = 6/504 (1%)
 Frame = +2

Query: 2    GEFTSLEFNAFCKSNGISRQLTAAYTPQQNGVAERKNRTIMNMVRSMLTEKQVPKSFWPE 181
            GEFTS+EF  FCK+ GISRQLTAAYTPQQNGVAERKN+TIMN VR+ L  KQVPK+FWPE
Sbjct: 571  GEFTSMEFEEFCKTQGISRQLTAAYTPQQNGVAERKNKTIMNAVRATLNGKQVPKAFWPE 630

Query: 182  AVNWTVHVLNRSPTLAVKDMTPEEAWSGVKPNVDYFRVFGCIVHVHVPDNKRKKLDDKSF 361
            A  W VHV NRSPT AV+  TPEE W G KP VDYFRVFGC+ H H+P+ KR KLDDKS 
Sbjct: 631  AARWCVHVQNRSPTSAVEQKTPEEVWCGKKPRVDYFRVFGCVAHAHIPNQKRSKLDDKSK 690

Query: 362  KCVLLGMSEESKAYRLYDPVSKKIVVSRDVVFEENENWNWGTSNEETRFDVLEWSDSNXX 541
            +CV LG+S+ESKAY+L+DP++KK+++SRDV+FEE+++W+W    E +  DVL+W D    
Sbjct: 691  RCVFLGVSDESKAYKLFDPLTKKVIISRDVIFEEDKSWDWEGPKETSSTDVLDW-DEQMF 749

Query: 542  XXXXXXXXXXXXXXXXXXXXXXTSLSLRESSGENSQTFGESLPSSPER------RNRRAP 703
                                  +S    ++S E     GE +     +      R RR P
Sbjct: 750  EARKEDSRSAQQEGNGSITIAVSSSDPNDNSNETILPLGEDVDERATQVQGRATRQRREP 809

Query: 704  FWMEDYVTGEEFSEEEIEHNLVLFTSTTDPATFDEAVQSSKWRAAMDLEIKAIERNETWE 883
             WM DY     FSEE     L+L     DP ++ EA QS KWR AM+ EI+AIE+N+TWE
Sbjct: 810  VWMADYT---HFSEEADLMALMLAEHGGDPHSYKEASQSIKWREAMNAEIQAIEKNKTWE 866

Query: 884  LTDLPKGAKTIGVKWVFKTKLNENGEVDKCKARLVAKGYAQQYGIYYTEVFAPVARWDTI 1063
            LTD P G   IGVKWVFKTKLNE+G ++K KARLVAKGY+QQYG+ YTEVFAPVAR DT+
Sbjct: 867  LTDAPTGITPIGVKWVFKTKLNEHGNIEKHKARLVAKGYSQQYGVDYTEVFAPVARLDTV 926

Query: 1064 RMIIALAARNGWSVYQLDVKSAFLHGELNEAVFVEQPQGYEKKGEEHKVYRLKKALYGLK 1243
            R+++A+AA++ W V+QLDVKSAFLHGEL E V+++QP+G+ K+G+E KVYRL+KALYGLK
Sbjct: 927  RVLLAIAAQHKWEVFQLDVKSAFLHGELKEEVYIQQPEGFVKEGKEDKVYRLRKALYGLK 986

Query: 1244 QAPRAWYSRIEAYFAKEGFERYSCEHTLFIKTGDGGKILIVSLYVDDLIFTGNDEIMFIK 1423
            QAPRAWYSRIEAYF KE FE+   EHTLF K   G  ILIVSLYVDDLI+TG+D  M  +
Sbjct: 987  QAPRAWYSRIEAYFVKEQFEKCPSEHTLFTKK-SGDNILIVSLYVDDLIYTGSDRSMCEQ 1045

Query: 1424 FKNSMKLEFDMTDLGKMKYFLGVE 1495
            FK SM LEFDMTDLG+M+YFLG+E
Sbjct: 1046 FKGSMMLEFDMTDLGRMRYFLGIE 1069


>dbj|GAU23361.1| hypothetical protein TSUD_334080 [Trifolium subterraneum]
          Length = 1322

 Score =  602 bits (1553), Expect = 0.0
 Identities = 300/502 (59%), Positives = 374/502 (74%), Gaps = 4/502 (0%)
 Frame = +2

Query: 2    GEFTSLEFNAFCKSNGISRQLTAAYTPQQNGVAERKNRTIMNMVRSMLTEKQVPKSFWPE 181
            GEFTS  FN FC ++GI RQLT AYTPQQNGV+ERKNRT++NM+RSM+  + VPKSFWPE
Sbjct: 554  GEFTSNNFNEFCSNHGIKRQLTTAYTPQQNGVSERKNRTLLNMIRSMMAGRNVPKSFWPE 613

Query: 182  AVNWTVHVLNRSPTLAVKDMTPEEAWSGVKPNVDYFRVFGCIVHVHVPDNKRKKLDDKSF 361
            A+ W+ +VLNRSPTLAVKD+TPEEAWSG KP V +FR+FGC+ +VH+PD  RKKLDDKS 
Sbjct: 614  ALKWSTYVLNRSPTLAVKDITPEEAWSGSKPTVHHFRIFGCLAYVHIPDFNRKKLDDKSI 673

Query: 362  KCVLLGMSEESKAYRLYDPVSKKIVVSRDVVFEENENWNWGT-SNEETRFDVLEWSDSNX 538
            KC+LLG+SEESK Y+LYDPV+K+++VS+DVVFEE++ WNW   S  + + D+   +D   
Sbjct: 674  KCILLGLSEESKGYKLYDPVNKRVIVSKDVVFEESKGWNWNNDSKSQKQIDITSTTDEG- 732

Query: 539  XXXXXXXXXXXXXXXXXXXXXXXTSLSLRESSGENSQTFGESLPSSP-ERRNRRAPFWME 715
                                          +S   +   GES  S     R +R P ++ 
Sbjct: 733  -------NSNEDHEIVPDDEVSDEGFEANNNSSPETDMTGESTDSEELTPRVKRKPGYLN 785

Query: 716  DYVTGEEFSEEEIEH--NLVLFTSTTDPATFDEAVQSSKWRAAMDLEIKAIERNETWELT 889
            DYVTGEE  +EE +H  NL +F++  DP  +DEA+++  W+ AMD EI++IERN+TWEL 
Sbjct: 786  DYVTGEEL-DEETQHLQNLAMFSTKEDPTNYDEAIKNGVWKKAMDQEIESIERNDTWELV 844

Query: 890  DLPKGAKTIGVKWVFKTKLNENGEVDKCKARLVAKGYAQQYGIYYTEVFAPVARWDTIRM 1069
             LP GAK IGVKW++KTK NE GEV+K KARLVAKGY+QQ GI Y EVFAPVARWDTIR 
Sbjct: 845  TLPAGAKKIGVKWIYKTKYNEKGEVEKYKARLVAKGYSQQQGIDYNEVFAPVARWDTIRT 904

Query: 1070 IIALAARNGWSVYQLDVKSAFLHGELNEAVFVEQPQGYEKKGEEHKVYRLKKALYGLKQA 1249
            I++LAA   WSVYQLDVKSAFLHGEL E V+V+QP GY+K+ E+ KVY+LKKALYGLKQA
Sbjct: 905  ILSLAASQNWSVYQLDVKSAFLHGELVENVYVDQPLGYQKE-EKGKVYKLKKALYGLKQA 963

Query: 1250 PRAWYSRIEAYFAKEGFERYSCEHTLFIKTGDGGKILIVSLYVDDLIFTGNDEIMFIKFK 1429
            PRAWYS+IE+YF +E FE+   EHTLF+K  +  K+LIVSLYVDDLI+TGND  MF  FK
Sbjct: 964  PRAWYSKIESYFGQEKFEKCPYEHTLFVKR-NKEKLLIVSLYVDDLIYTGNDVEMFNNFK 1022

Query: 1430 NSMKLEFDMTDLGKMKYFLGVE 1495
            +SM+ +F MTDLGKM++FLGVE
Sbjct: 1023 DSMQKKFAMTDLGKMRFFLGVE 1044


>emb|CAN79845.1| hypothetical protein VITISV_027568 [Vitis vinifera]
          Length = 1226

 Score =  599 bits (1545), Expect = 0.0
 Identities = 301/486 (61%), Positives = 359/486 (73%), Gaps = 7/486 (1%)
 Frame = +2

Query: 59   QLTAAYTPQQNGVAERKNRTIMNMVRSMLTEKQVPKSFWPEAVNWTVHVLNRSPTLAVKD 238
            +LTAAYTPQ NGVAERKNRTIMNMVRSML+ K++PK+FWPEAVNWTVH LNRSPT AV++
Sbjct: 480  KLTAAYTPQXNGVAERKNRTIMNMVRSMLSAKKLPKTFWPEAVNWTVHGLNRSPTFAVQN 539

Query: 239  MTPEEAWSGVKPNVDYFRVFGCIVHVHVPDNKRKKLDDKSFKCVLLGMSEESKAYRLYDP 418
             TPEEAW  +KP+VDYFRVFGC+ HVHVPD+KR KLDDKSF CVLLG+SEESKAY LYDP
Sbjct: 540  KTPEEAWGKLKPSVDYFRVFGCLSHVHVPDSKRTKLDDKSFSCVLLGVSEESKAYXLYDP 599

Query: 419  VSKKIVVSRDVVFEENENWNWGTSNEETRFDVLEWSDSNXXXXXXXXXXXXXXXXXXXXX 598
            +S+KI++SR+VVFEE+++W+W    EE     LEW D                       
Sbjct: 600  ISQKIIISRNVVFEEDKBWDWDKKYEEAIVCDLEWGDDGEEATVNEEKSDSNLDADIEED 659

Query: 599  XXXTSLSLRESSGENSQTFGESL-------PSSPERRNRRAPFWMEDYVTGEEFSEEEIE 757
                + +   +  + + T    L        +S   RNRR P W  DY TGE  SEEE E
Sbjct: 660  TXENNATATATESDAAVTASHLLIQNRDNPSNSNAARNRRPPVWTSDYETGEGISEEEHE 719

Query: 758  HNLVLFTSTTDPATFDEAVQSSKWRAAMDLEIKAIERNETWELTDLPKGAKTIGVKWVFK 937
              L +F +  DP  F+EAV+S KWR  MD+E++AI++N+TWELTDLPKG KTIGVKWV+K
Sbjct: 720  VQLAMF-AAADPIYFEEAVKSEKWRTTMDVEMEAIKKNDTWELTDLPKGGKTIGVKWVYK 778

Query: 938  TKLNENGEVDKCKARLVAKGYAQQYGIYYTEVFAPVARWDTIRMIIALAARNGWSVYQLD 1117
            TK NENGE               ++G+ YTEVFAPVAR +TIR+++ALAA+ GWS+YQLD
Sbjct: 779  TKFNENGE---------------RFGVDYTEVFAPVARMETIRLVVALAAQRGWSIYQLD 823

Query: 1118 VKSAFLHGELNEAVFVEQPQGYEKKGEEHKVYRLKKALYGLKQAPRAWYSRIEAYFAKEG 1297
            VKSAFLHGELN+ VFVEQP GY +K  E KVY+LKKALYGLKQAPRAWY+RIEAYF KE 
Sbjct: 824  VKSAFLHGELNKXVFVEQPCGYVQKXNEQKVYKLKKALYGLKQAPRAWYNRIEAYFMKEV 883

Query: 1298 FERYSCEHTLFIKTGDGGKILIVSLYVDDLIFTGNDEIMFIKFKNSMKLEFDMTDLGKMK 1477
            FE+   EHTLFIKT   GK+LIVSLYVDDLIFT NDE+MF +FK SMK EF+MTDLGKM+
Sbjct: 884  FEKCDYEHTLFIKTNKEGKVLIVSLYVDDLIFTXNDELMFAEFKYSMKHEFNMTDLGKMR 943

Query: 1478 YFLGVE 1495
            YFLG+E
Sbjct: 944  YFLGLE 949


>dbj|GAU16533.1| hypothetical protein TSUD_167640 [Trifolium subterraneum]
          Length = 1103

 Score =  594 bits (1532), Expect = 0.0
 Identities = 301/512 (58%), Positives = 371/512 (72%), Gaps = 14/512 (2%)
 Frame = +2

Query: 2    GEFTSLEFNAFCKSNGISRQLTAAYTPQQNGVAERKNRTIMNMVRSMLTEKQVPKSFWPE 181
            GEF S EF  FC+ NGI RQLTAAYTPQQNG+AERKNRTIM M+R ML  K VPK+FWPE
Sbjct: 556  GEFNSDEFKEFCEVNGIKRQLTAAYTPQQNGIAERKNRTIMEMIRCMLAGKSVPKAFWPE 615

Query: 182  AVNWTVHVLNRSPTLAVKDMTPEEAWSGVKPNVDYFRVFGCIVHVHVPDNKRKKLDDKSF 361
            AVNW ++VLNRSPT A+KDMTPEE WS  KP+V +F++FGCI + HVPD +RKKLDDKS 
Sbjct: 616  AVNWAIYVLNRSPTAAIKDMTPEEVWSSTKPSVKHFKIFGCIAYAHVPDAQRKKLDDKSV 675

Query: 362  KCVLLGMSEESKAYRLYDPVSKKIVVSRDVVFEENENWNWGTSNEETRFDVL--EWSDSN 535
            KCV  G+SEE+KAYRLY+P++K+I++SRDV F E + W W   +E+    V+  E SD N
Sbjct: 676  KCVFFGISEETKAYRLYNPITKRIIISRDVKFVEKDKWKWDEKSEKLAEQVISDEESDKN 735

Query: 536  XXXXXXXXXXXXXXXXXXXXXXXXTSLSLRESSGENSQT------FGESLPS-SPERRNR 694
                                      +  ++S+  NS T       G S  + + + R R
Sbjct: 736  ------------NEEIGVEIADTDEEVHSQDSTPPNSPTTQDIDHIGTSTSNLNNQGRTR 783

Query: 695  RAPFWMEDY---VTGEEFSEEEIEHNLVLFTSTT--DPATFDEAVQSSKWRAAMDLEIKA 859
            + PFW  DY   +T +E  +E+   N + F   T  DP++F+EAV+SS WR AM+ EI+A
Sbjct: 784  KPPFWHSDYDTTITEDELVDED-SMNFITFGPCTSEDPSSFEEAVKSSTWRLAMNKEIEA 842

Query: 860  IERNETWELTDLPKGAKTIGVKWVFKTKLNENGEVDKCKARLVAKGYAQQYGIYYTEVFA 1039
            IE+N+TW+LTDLP+GAK IGVKW++KTKLNE GE++K KARLVAKGYAQ+YG  Y EVFA
Sbjct: 843  IEKNKTWQLTDLPQGAKVIGVKWIYKTKLNEKGEIEKYKARLVAKGYAQRYGTDYKEVFA 902

Query: 1040 PVARWDTIRMIIALAARNGWSVYQLDVKSAFLHGELNEAVFVEQPQGYEKKGEEHKVYRL 1219
            PVARWDTIR ++A++A  GW+VYQLDVKSAFLHGEL E V+VEQP GY K G+E KVY+L
Sbjct: 903  PVARWDTIRSLLAISASRGWNVYQLDVKSAFLHGELKETVYVEQPAGYVKSGKEDKVYKL 962

Query: 1220 KKALYGLKQAPRAWYSRIEAYFAKEGFERYSCEHTLFIKTGDGGKILIVSLYVDDLIFTG 1399
             KALYGLKQAPRAWYS+IEAYF KEGF +   EHTLF+K  D    LI+SLYVDDLIFTG
Sbjct: 963  HKALYGLKQAPRAWYSKIEAYFIKEGFVKCPHEHTLFVKRED-KNWLIISLYVDDLIFTG 1021

Query: 1400 NDEIMFIKFKNSMKLEFDMTDLGKMKYFLGVE 1495
            ND  +  +FK SM   FDMTDLGKM++FLG+E
Sbjct: 1022 NDNKLLKQFKESMMTTFDMTDLGKMRHFLGIE 1053


>dbj|GAU16044.1| hypothetical protein TSUD_339150 [Trifolium subterraneum]
          Length = 1284

 Score =  597 bits (1538), Expect = 0.0
 Identities = 306/502 (60%), Positives = 365/502 (72%), Gaps = 4/502 (0%)
 Frame = +2

Query: 2    GEFTSLEFNAFCKSNGISRQLTAAYTPQQNGVAERKNRTIMNMVRSMLTEKQVPKSFWPE 181
            GEFTS  FN FC  +GI RQLTAAYTPQQNGV+ERKNRT+MNMVRSML+ + VPK FWPE
Sbjct: 537  GEFTSNSFNEFCSEHGIKRQLTAAYTPQQNGVSERKNRTLMNMVRSMLSGRCVPKRFWPE 596

Query: 182  AVNWTVHVLNRSPTLAVKDMTPEEAWSGVKPNVDYFRVFGCIVHVHVPDNKRKKLDDKSF 361
            AV W  HVLNRSPTL+VK+MTPEEAWSG KP+V YFRVFGC+ + H+PD  RKKLD KS 
Sbjct: 597  AVVWATHVLNRSPTLSVKNMTPEEAWSGTKPSVAYFRVFGCLGYAHIPDAHRKKLDPKSI 656

Query: 362  KCVLLGMSEESKAYRLYDPVSKKIVVSRDVVFEENENWNWGTSNEETRFDVLEWSDSNXX 541
            KCV LG+SEESKAY++YDP+ KKI++SRDVVF E + W WG  N+E     +   D++  
Sbjct: 657  KCVHLGVSEESKAYKVYDPIQKKIIISRDVVFNETQGWEWGEKNKEHDIPPVLDIDASST 716

Query: 542  XXXXXXXXXXXXXXXXXXXXXXTSLSLRESSGENSQTFGESLPSSPERRNRRAPFWMEDY 721
                                         S  E S+ + E L  +   R+RR P W+ DY
Sbjct: 717  DEPEILIDETEGQADIENENSAHEEPPHHSETEPSE-YEEDLEDTLPPRSRRPPGWVRDY 775

Query: 722  VTG-EEFSEEEIE---HNLVLFTSTTDPATFDEAVQSSKWRAAMDLEIKAIERNETWELT 889
            VT  EE  E E     +NL +F    DP  +++AV+   WR AMD EI++IERN+TWEL 
Sbjct: 776  VTNIEELDEAEQAANLNNLAVFCDNEDPTCYEDAVKLVVWRHAMDQEIESIERNKTWELV 835

Query: 890  DLPKGAKTIGVKWVFKTKLNENGEVDKCKARLVAKGYAQQYGIYYTEVFAPVARWDTIRM 1069
            DLPKGAK IGVKWV+KTK NENGEVDK KARLVAKGY+QQ+GI + EVFAPVARWDTIR 
Sbjct: 836  DLPKGAKRIGVKWVYKTKYNENGEVDKHKARLVAKGYSQQHGIDFNEVFAPVARWDTIRA 895

Query: 1070 IIALAARNGWSVYQLDVKSAFLHGELNEAVFVEQPQGYEKKGEEHKVYRLKKALYGLKQA 1249
            I+A+AA  GW VYQLDVKSAFLHG+L E V+V+QP GY K  +  KVY+L+KALYGLKQA
Sbjct: 896  ILAIAASKGWFVYQLDVKSAFLHGDLVENVYVDQPPGYSK--DIGKVYKLRKALYGLKQA 953

Query: 1250 PRAWYSRIEAYFAKEGFERYSCEHTLFIKTGDGGKILIVSLYVDDLIFTGNDEIMFIKFK 1429
            PRAWYS+IE+YF +E FE+   EHTLF+K      ILIVSLYVDDLIFTG+++ MF  FK
Sbjct: 954  PRAWYSKIESYFLQEKFEKCPHEHTLFVKKEGKEDILIVSLYVDDLIFTGSNKKMFETFK 1013

Query: 1430 NSMKLEFDMTDLGKMKYFLGVE 1495
            NSMK +F MTDLGKM++FLGVE
Sbjct: 1014 NSMKSKFSMTDLGKMRFFLGVE 1035