BLASTX nr result

ID: Rehmannia31_contig00025293 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00025293
         (371 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN01704.1| hypothetical protein CDL12_25790 [Handroanthus im...    80   3e-15
ref|XP_011098928.1| double-stranded RNA-binding protein 3 [Sesam...    67   2e-10

>gb|PIN01704.1| hypothetical protein CDL12_25790 [Handroanthus impetiginosus]
          Length = 430

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 57/121 (47%), Positives = 70/121 (57%), Gaps = 21/121 (17%)
 Frame = +1

Query: 1   SKISEAIIKKNPTEMKGSNN---SSSHFYGGKPVYNPFPLPFPLPATDHT---------- 141
           +KISEAI KK P E++G +N   SSS  YGGKPVYNPFPL F L   DHT          
Sbjct: 303 NKISEAI-KKKPIEVEGCSNVSSSSSVLYGGKPVYNPFPLNFSL--LDHTSENARTPILD 359

Query: 142 --------CSQIGRSTFTGGVYQQNSRSIAPAVQVRSVIPVCXXXXXXXNQTAMKECSST 297
                    S++GRSTF  GVYQ   + IAPAVQ+RSVIPVC         ++ +  SS+
Sbjct: 360 PTTLFKGPSSEMGRSTF-NGVYQ--PQRIAPAVQIRSVIPVCAAAPVRIRPSSNQPSSSS 416

Query: 298 S 300
           +
Sbjct: 417 A 417


>ref|XP_011098928.1| double-stranded RNA-binding protein 3 [Sesamum indicum]
          Length = 468

 Score = 67.4 bits (163), Expect = 2e-10
 Identities = 51/136 (37%), Positives = 65/136 (47%), Gaps = 30/136 (22%)
 Frame = +1

Query: 1   SKISEAIIKKNPTEMKGSNNSSSHFYGGKPVYNPFPLP------FPLP------ATDH-- 138
           SKISEAI  K    + G ++SSS FYGGK VYNPF LP      FPLP      +  H  
Sbjct: 315 SKISEAIKNKYGGTVSGRSHSSSIFYGGKAVYNPFALPSWRNLNFPLPDEAAESSRTHKG 374

Query: 139 -------TCSQIGRSTFTGGVYQQNSRS---------IAPAVQVRSVIPVCXXXXXXXNQ 270
                  T SQ     F G      S++         IAP VQ+RSVIPVC         
Sbjct: 375 SNILDPITPSQTAIPEFKGSSTSCGSQTGRPGFSGVRIAPEVQIRSVIPVCAAPPVRLRS 434

Query: 271 TAMKECSSTSTPPSTA 318
           +   +  ++++PPST+
Sbjct: 435 STSTKEGASASPPSTS 450


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