BLASTX nr result

ID: Rehmannia31_contig00025229 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00025229
         (706 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011079564.1| DNA mismatch repair protein MSH6 [Sesamum in...   322   2e-98
ref|XP_012834133.1| PREDICTED: DNA mismatch repair protein MSH6 ...   310   4e-94
gb|EYU46804.1| hypothetical protein MIMGU_mgv1a000294mg [Erythra...   290   4e-87
gb|EPS71963.1| hypothetical protein M569_02799, partial [Genlise...   259   1e-81
ref|XP_022890528.1| DNA mismatch repair protein MSH6 isoform X2 ...   272   3e-81
ref|XP_022890527.1| DNA mismatch repair protein MSH6 isoform X1 ...   272   1e-80
gb|PIM97702.1| Mismatch repair ATPase MSH6 (MutS family) [Handro...   259   9e-77
ref|XP_010259328.1| PREDICTED: DNA mismatch repair protein MSH6 ...   254   2e-74
ref|XP_011041329.1| PREDICTED: DNA mismatch repair protein MSH6-...   255   2e-74
gb|PNT04405.1| hypothetical protein POPTR_014G121800v3 [Populus ...   254   2e-74
ref|XP_011041321.1| PREDICTED: DNA mismatch repair protein MSH6-...   255   2e-74
ref|XP_018846150.1| PREDICTED: DNA mismatch repair protein MSH6 ...   255   2e-74
ref|XP_010259327.1| PREDICTED: DNA mismatch repair protein MSH6 ...   254   2e-74
ref|XP_002320307.2| DNA mismatch repair protein MSH6-1 [Populus ...   254   3e-74
ref|XP_010259326.1| PREDICTED: DNA mismatch repair protein MSH6 ...   254   3e-74
gb|POE57964.1| dna mismatch repair protein msh6 [Quercus suber]       253   6e-74
emb|CBI36942.3| unnamed protein product, partial [Vitis vinifera]     253   7e-74
ref|XP_024170159.1| DNA mismatch repair protein MSH6 isoform X3 ...   253   7e-74
ref|XP_024170158.1| DNA mismatch repair protein MSH6 isoform X2 ...   253   7e-74
ref|XP_024170157.1| DNA mismatch repair protein MSH6 isoform X1 ...   253   8e-74

>ref|XP_011079564.1| DNA mismatch repair protein MSH6 [Sesamum indicum]
          Length = 1339

 Score =  322 bits (825), Expect = 2e-98
 Identities = 167/224 (74%), Positives = 177/224 (79%), Gaps = 3/224 (1%)
 Frame = +1

Query: 43  TGRGGARKKLSSGKRKVTEKEQMSSVANKKSKIGGELKNGVPEVSAA---EKLIDPTKRN 213
           +GRGG  KK +S KRK + + +  S+A KKSKIG EL+N V  VS A   EK  +PT R 
Sbjct: 254 SGRGGVGKKTNSSKRKASGRGKTESIARKKSKIGVELENSVSTVSFAGNSEKRNEPTARI 313

Query: 214 SPYSGKVSLLDSPTVGDGAERFVTRGAGKLRFLEXXXXXXXXXXXXXXXYDPRTLYMPPD 393
           S   GKVSL DSPTVGD AERFVTR A KL FLE               YDPRTLY+PP+
Sbjct: 314 SADGGKVSLRDSPTVGDAAERFVTREAEKLPFLEVDRRDANRRRPGDANYDPRTLYLPPE 373

Query: 394 FVKGLTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGF 573
           FVK LTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGF
Sbjct: 374 FVKSLTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGF 433

Query: 574 PEKNFSTNVEKLARKGYRVLVVEQTETPEQLELRRREKGSKDKV 705
           PEKNFS NVEKLARKGYRVLVVEQTETPEQLELRRREKGSKDKV
Sbjct: 434 PEKNFSMNVEKLARKGYRVLVVEQTETPEQLELRRREKGSKDKV 477


>ref|XP_012834133.1| PREDICTED: DNA mismatch repair protein MSH6 [Erythranthe guttata]
          Length = 1300

 Score =  310 bits (793), Expect = 4e-94
 Identities = 161/224 (71%), Positives = 171/224 (76%), Gaps = 3/224 (1%)
 Frame = +1

Query: 43  TGRGGARKKLSSGKRKVTEKEQMSSVANKKSKIGGELKNGV---PEVSAAEKLIDPTKRN 213
           +GRG   KK +S K KV E EQM SV+NKK K GGE K+     P    AEKL+D TKR 
Sbjct: 221 SGRGDIGKKFNSRKLKVDEGEQMVSVSNKKRKTGGECKSSASKAPFAGDAEKLVDSTKRT 280

Query: 214 SPYSGKVSLLDSPTVGDGAERFVTRGAGKLRFLEXXXXXXXXXXXXXXXYDPRTLYMPPD 393
           S  S KVS LDS  VGD AERFV R A K  F+E               YD RTLY+PP 
Sbjct: 281 SASSPKVSPLDSSKVGDDAERFVLREADKFGFVEKNRKDAEGRRPGDVNYDSRTLYLPPS 340

Query: 394 FVKGLTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGF 573
           FVKGLTGGQRQWWEFK+KHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGF
Sbjct: 341 FVKGLTGGQRQWWEFKAKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGF 400

Query: 574 PEKNFSTNVEKLARKGYRVLVVEQTETPEQLELRRREKGSKDKV 705
           PEKNFS NVEKLARKGYRVLVVEQTETP+QLE+RRREKGSKDKV
Sbjct: 401 PEKNFSMNVEKLARKGYRVLVVEQTETPDQLEVRRREKGSKDKV 444


>gb|EYU46804.1| hypothetical protein MIMGU_mgv1a000294mg [Erythranthe guttata]
          Length = 1287

 Score =  290 bits (743), Expect = 4e-87
 Identities = 153/224 (68%), Positives = 163/224 (72%), Gaps = 3/224 (1%)
 Frame = +1

Query: 43  TGRGGARKKLSSGKRKVTEKEQMSSVANKKSKIGGELKNGV---PEVSAAEKLIDPTKRN 213
           +GRG   KK +S K KV E EQM SV+NKK K GGE K+     P    AEKL+ P    
Sbjct: 221 SGRGDIGKKFNSRKLKVDEGEQMVSVSNKKRKTGGECKSSASKAPFAGDAEKLVSP---- 276

Query: 214 SPYSGKVSLLDSPTVGDGAERFVTRGAGKLRFLEXXXXXXXXXXXXXXXYDPRTLYMPPD 393
                    LDS  VGD AERFV R A K  F+E               YD RTLY+PP 
Sbjct: 277 ---------LDSSKVGDDAERFVLREADKFGFVEKNRKDAEGRRPGDVNYDSRTLYLPPS 327

Query: 394 FVKGLTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGF 573
           FVKGLTGGQRQWWEFK+KHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGF
Sbjct: 328 FVKGLTGGQRQWWEFKAKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGF 387

Query: 574 PEKNFSTNVEKLARKGYRVLVVEQTETPEQLELRRREKGSKDKV 705
           PEKNFS NVEKLARKGYRVLVVEQTETP+QLE+RRREKGSKDKV
Sbjct: 388 PEKNFSMNVEKLARKGYRVLVVEQTETPDQLEVRRREKGSKDKV 431


>gb|EPS71963.1| hypothetical protein M569_02799, partial [Genlisea aurea]
          Length = 423

 Score =  259 bits (662), Expect = 1e-81
 Identities = 132/211 (62%), Positives = 152/211 (72%)
 Frame = +1

Query: 73  SSGKRKVTEKEQMSSVANKKSKIGGELKNGVPEVSAAEKLIDPTKRNSPYSGKVSLLDSP 252
           +S KR + + EQ+ + + K+ KI         E S   K      + +  +GK S+LDSP
Sbjct: 213 NSAKRSLKDGEQLGTASGKRRKIAQGNCAKASESSVPVKKQSGPPQRTMGNGKSSMLDSP 272

Query: 253 TVGDGAERFVTRGAGKLRFLEXXXXXXXXXXXXXXXYDPRTLYMPPDFVKGLTGGQRQWW 432
            VGD  ERF  R   K RFL+               YDPRTL++P DF+K ++ GQRQWW
Sbjct: 273 IVGDDGERFDARSQ-KFRFLDVDRKDANGRRPGDENYDPRTLHLPLDFLKSISAGQRQWW 331

Query: 433 EFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGFPEKNFSTNVEKLA 612
           EFKSKHMDKVLFFKMGKFYELFEMDAH+GAKELGLQYMKGEQPHCGFPEKNFS NV+KLA
Sbjct: 332 EFKSKHMDKVLFFKMGKFYELFEMDAHIGAKELGLQYMKGEQPHCGFPEKNFSVNVDKLA 391

Query: 613 RKGYRVLVVEQTETPEQLELRRREKGSKDKV 705
           RKGYRVLVVEQTETPEQLE+RRREKGSKDKV
Sbjct: 392 RKGYRVLVVEQTETPEQLEIRRREKGSKDKV 422


>ref|XP_022890528.1| DNA mismatch repair protein MSH6 isoform X2 [Olea europaea var.
           sylvestris]
          Length = 1077

 Score =  272 bits (696), Expect = 3e-81
 Identities = 143/223 (64%), Positives = 164/223 (73%), Gaps = 2/223 (0%)
 Frame = +1

Query: 43  TGRGGARKKLSSGKRKVTEKEQMSSVANKKSKIGGELKNGVPEVS--AAEKLIDPTKRNS 216
           +G+ G  KK+ + KRK++   +    ANKKS   G+LKN   + S  A E  +  + ++ 
Sbjct: 222 SGKSGVSKKVETRKRKLSAGGKSELSANKKSS--GDLKNSASKFSFGANEGELKRSTKHI 279

Query: 217 PYSGKVSLLDSPTVGDGAERFVTRGAGKLRFLEXXXXXXXXXXXXXXXYDPRTLYMPPDF 396
             SGKVS+ DS  VGD AERF  R A KLRFL                YDP+TLY+P DF
Sbjct: 280 ADSGKVSIPDSGLVGDVAERFGAREAEKLRFLGVDRKDAMKRRPSDVNYDPKTLYLPQDF 339

Query: 397 VKGLTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGFP 576
           +K L+GGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAH+GAKEL LQYMKGEQPHCGFP
Sbjct: 340 LKSLSGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHIGAKELDLQYMKGEQPHCGFP 399

Query: 577 EKNFSTNVEKLARKGYRVLVVEQTETPEQLELRRREKGSKDKV 705
           EKNFS NVEKLA+KGYRVLVVEQTETP+QLELRRREKG KDKV
Sbjct: 400 EKNFSVNVEKLAQKGYRVLVVEQTETPDQLELRRREKGCKDKV 442


>ref|XP_022890527.1| DNA mismatch repair protein MSH6 isoform X1 [Olea europaea var.
           sylvestris]
          Length = 1305

 Score =  272 bits (696), Expect = 1e-80
 Identities = 143/223 (64%), Positives = 164/223 (73%), Gaps = 2/223 (0%)
 Frame = +1

Query: 43  TGRGGARKKLSSGKRKVTEKEQMSSVANKKSKIGGELKNGVPEVS--AAEKLIDPTKRNS 216
           +G+ G  KK+ + KRK++   +    ANKKS   G+LKN   + S  A E  +  + ++ 
Sbjct: 222 SGKSGVSKKVETRKRKLSAGGKSELSANKKSS--GDLKNSASKFSFGANEGELKRSTKHI 279

Query: 217 PYSGKVSLLDSPTVGDGAERFVTRGAGKLRFLEXXXXXXXXXXXXXXXYDPRTLYMPPDF 396
             SGKVS+ DS  VGD AERF  R A KLRFL                YDP+TLY+P DF
Sbjct: 280 ADSGKVSIPDSGLVGDVAERFGAREAEKLRFLGVDRKDAMKRRPSDVNYDPKTLYLPQDF 339

Query: 397 VKGLTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGFP 576
           +K L+GGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAH+GAKEL LQYMKGEQPHCGFP
Sbjct: 340 LKSLSGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHIGAKELDLQYMKGEQPHCGFP 399

Query: 577 EKNFSTNVEKLARKGYRVLVVEQTETPEQLELRRREKGSKDKV 705
           EKNFS NVEKLA+KGYRVLVVEQTETP+QLELRRREKG KDKV
Sbjct: 400 EKNFSVNVEKLAQKGYRVLVVEQTETPDQLELRRREKGCKDKV 442


>gb|PIM97702.1| Mismatch repair ATPase MSH6 (MutS family) [Handroanthus
           impetiginosus]
          Length = 1003

 Score =  259 bits (662), Expect = 9e-77
 Identities = 127/150 (84%), Positives = 129/150 (86%)
 Frame = +1

Query: 256 VGDGAERFVTRGAGKLRFLEXXXXXXXXXXXXXXXYDPRTLYMPPDFVKGLTGGQRQWWE 435
           VGD AERF  R A KLRFLE               YDPRTL++PPDFVKGLTGGQRQWWE
Sbjct: 2   VGDAAERFGAREAEKLRFLEVDRRDANRRRPGDINYDPRTLFLPPDFVKGLTGGQRQWWE 61

Query: 436 FKSKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGFPEKNFSTNVEKLAR 615
           FKSKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGFPEKNFS NVEKLAR
Sbjct: 62  FKSKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGFPEKNFSMNVEKLAR 121

Query: 616 KGYRVLVVEQTETPEQLELRRREKGSKDKV 705
           KGYRVLVVEQTETPEQLELRRREKGSKDKV
Sbjct: 122 KGYRVLVVEQTETPEQLELRRREKGSKDKV 151


>ref|XP_010259328.1| PREDICTED: DNA mismatch repair protein MSH6 isoform X3 [Nelumbo
           nucifera]
          Length = 1135

 Score =  254 bits (649), Expect = 2e-74
 Identities = 135/220 (61%), Positives = 156/220 (70%), Gaps = 6/220 (2%)
 Frame = +1

Query: 64  KKLSSGKRKVTEKEQMSSVANKKSKIGGELKNGVPEVS-----AAEKLIDPTK-RNSPYS 225
           K ++SGKRK  E +++ S   KK K  G ++ GV  V+     +  +L++     N  Y 
Sbjct: 233 KNMASGKRKNFEWDKVGS--GKKIKSVGNVEKGVLNVTKVTLDSGSRLVEAASDANRRYV 290

Query: 226 GKVSLLDSPTVGDGAERFVTRGAGKLRFLEXXXXXXXXXXXXXXXYDPRTLYMPPDFVKG 405
             ++   +   GD AERF  R A KLRFL                YDP+TLY+P DF+K 
Sbjct: 291 SHIT--GNTLTGDSAERFALRDAEKLRFLGEGRRDSERRRPGDANYDPKTLYLPSDFLKS 348

Query: 406 LTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGFPEKN 585
           L+GGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAH+GAKEL LQYMKGEQPHCGFPEKN
Sbjct: 349 LSGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHIGAKELDLQYMKGEQPHCGFPEKN 408

Query: 586 FSTNVEKLARKGYRVLVVEQTETPEQLELRRREKGSKDKV 705
           FS NVEKLARKGYRVLVVEQTETPEQLELRR+EKG KDKV
Sbjct: 409 FSLNVEKLARKGYRVLVVEQTETPEQLELRRKEKGCKDKV 448


>ref|XP_011041329.1| PREDICTED: DNA mismatch repair protein MSH6-like isoform X2
           [Populus euphratica]
          Length = 1299

 Score =  255 bits (651), Expect = 2e-74
 Identities = 136/220 (61%), Positives = 151/220 (68%)
 Frame = +1

Query: 46  GRGGARKKLSSGKRKVTEKEQMSSVANKKSKIGGELKNGVPEVSAAEKLIDPTKRNSPYS 225
           G+ G R    S KRK + +     +  KK K GG+   G  +VS  E +    K N  + 
Sbjct: 226 GKKGKRGGKDSRKRKASGEGGKLDLG-KKGKSGGDASTGGVKVSVVEPV--KNKENGVFD 282

Query: 226 GKVSLLDSPTVGDGAERFVTRGAGKLRFLEXXXXXXXXXXXXXXXYDPRTLYMPPDFVKG 405
           G     D+  + D +ERF TR A K  FL                YDPRTLY+P +F K 
Sbjct: 283 G----FDNALMTDASERFSTREAEKFPFLGRERRDAKRRRPGDVDYDPRTLYLPAEFAKS 338

Query: 406 LTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGFPEKN 585
           LTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKEL LQYMKGEQPHCGFPEKN
Sbjct: 339 LTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKN 398

Query: 586 FSTNVEKLARKGYRVLVVEQTETPEQLELRRREKGSKDKV 705
           FS NVEKLARKGYR+LVVEQTETPEQLELRR+EKGSKDKV
Sbjct: 399 FSLNVEKLARKGYRILVVEQTETPEQLELRRKEKGSKDKV 438


>gb|PNT04405.1| hypothetical protein POPTR_014G121800v3 [Populus trichocarpa]
          Length = 1143

 Score =  254 bits (649), Expect = 2e-74
 Identities = 136/219 (62%), Positives = 151/219 (68%)
 Frame = +1

Query: 46  GRGGARKKLSSGKRKVTEKEQMSSVANKKSKIGGELKNGVPEVSAAEKLIDPTKRNSPYS 225
           G+ G R    S KRK + +     +  KK K GG+   G  +VS  E +    K N  ++
Sbjct: 229 GKKGKRGGKDSRKRKASGEGGKLDLG-KKGKSGGDASTGGVKVSVVEPV--KNKENGVFN 285

Query: 226 GKVSLLDSPTVGDGAERFVTRGAGKLRFLEXXXXXXXXXXXXXXXYDPRTLYMPPDFVKG 405
           G     D+  + D +ERF TR A K  FL                YDPRTLY+P +F K 
Sbjct: 286 G----FDNALMTDASERFSTREAEKFPFLGRERRDAKRRRPGDVDYDPRTLYLPAEFAKS 341

Query: 406 LTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGFPEKN 585
           LTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKEL LQYMKGEQPHCGFPEKN
Sbjct: 342 LTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKN 401

Query: 586 FSTNVEKLARKGYRVLVVEQTETPEQLELRRREKGSKDK 702
           FS NVEKLARKGYRVLVVEQTETPEQLELRR+EKGSKDK
Sbjct: 402 FSLNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDK 440


>ref|XP_011041321.1| PREDICTED: DNA mismatch repair protein MSH6-like isoform X1
           [Populus euphratica]
          Length = 1313

 Score =  255 bits (651), Expect = 2e-74
 Identities = 136/220 (61%), Positives = 151/220 (68%)
 Frame = +1

Query: 46  GRGGARKKLSSGKRKVTEKEQMSSVANKKSKIGGELKNGVPEVSAAEKLIDPTKRNSPYS 225
           G+ G R    S KRK + +     +  KK K GG+   G  +VS  E +    K N  + 
Sbjct: 226 GKKGKRGGKDSRKRKASGEGGKLDLG-KKGKSGGDASTGGVKVSVVEPV--KNKENGVFD 282

Query: 226 GKVSLLDSPTVGDGAERFVTRGAGKLRFLEXXXXXXXXXXXXXXXYDPRTLYMPPDFVKG 405
           G     D+  + D +ERF TR A K  FL                YDPRTLY+P +F K 
Sbjct: 283 G----FDNALMTDASERFSTREAEKFPFLGRERRDAKRRRPGDVDYDPRTLYLPAEFAKS 338

Query: 406 LTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGFPEKN 585
           LTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKEL LQYMKGEQPHCGFPEKN
Sbjct: 339 LTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKN 398

Query: 586 FSTNVEKLARKGYRVLVVEQTETPEQLELRRREKGSKDKV 705
           FS NVEKLARKGYR+LVVEQTETPEQLELRR+EKGSKDKV
Sbjct: 399 FSLNVEKLARKGYRILVVEQTETPEQLELRRKEKGSKDKV 438


>ref|XP_018846150.1| PREDICTED: DNA mismatch repair protein MSH6 [Juglans regia]
          Length = 1347

 Score =  255 bits (651), Expect = 2e-74
 Identities = 140/214 (65%), Positives = 155/214 (72%), Gaps = 4/214 (1%)
 Frame = +1

Query: 76  SGKRKVTEKEQMSSVANKKSKIGG---ELKNGVPEVSAAEKLIDPTKRNSPYSGKVSL-L 243
           S KRKV+E E++ S   KKSK GG   +   G  ++S  E L      ++  SGK S  L
Sbjct: 278 SRKRKVSEGEKLGST--KKSKNGGGGQDTCKGGFKISLTETL------SNAESGKASNDL 329

Query: 244 DSPTVGDGAERFVTRGAGKLRFLEXXXXXXXXXXXXXXXYDPRTLYMPPDFVKGLTGGQR 423
            +  +GD AERF  R   KL FL                YDPRTLY+PPDF++ L+GGQR
Sbjct: 330 GNALMGDAAERFGMRETEKLFFLGEERRDAKRRRPGDANYDPRTLYLPPDFLRSLSGGQR 389

Query: 424 QWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGFPEKNFSTNVE 603
           QWWEFKSKHMDKVLFFKMGKFYELFEMDAHVG KEL LQYMKGEQPHCGFPEKNFS NVE
Sbjct: 390 QWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGVKELDLQYMKGEQPHCGFPEKNFSMNVE 449

Query: 604 KLARKGYRVLVVEQTETPEQLELRRREKGSKDKV 705
           KLARKGYRVLVVEQTETPEQLELRR+EKGSKDKV
Sbjct: 450 KLARKGYRVLVVEQTETPEQLELRRKEKGSKDKV 483


>ref|XP_010259327.1| PREDICTED: DNA mismatch repair protein MSH6 isoform X2 [Nelumbo
           nucifera]
          Length = 1174

 Score =  254 bits (649), Expect = 2e-74
 Identities = 135/220 (61%), Positives = 156/220 (70%), Gaps = 6/220 (2%)
 Frame = +1

Query: 64  KKLSSGKRKVTEKEQMSSVANKKSKIGGELKNGVPEVS-----AAEKLIDPTK-RNSPYS 225
           K ++SGKRK  E +++ S   KK K  G ++ GV  V+     +  +L++     N  Y 
Sbjct: 233 KNMASGKRKNFEWDKVGS--GKKIKSVGNVEKGVLNVTKVTLDSGSRLVEAASDANRRYV 290

Query: 226 GKVSLLDSPTVGDGAERFVTRGAGKLRFLEXXXXXXXXXXXXXXXYDPRTLYMPPDFVKG 405
             ++   +   GD AERF  R A KLRFL                YDP+TLY+P DF+K 
Sbjct: 291 SHIT--GNTLTGDSAERFALRDAEKLRFLGEGRRDSERRRPGDANYDPKTLYLPSDFLKS 348

Query: 406 LTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGFPEKN 585
           L+GGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAH+GAKEL LQYMKGEQPHCGFPEKN
Sbjct: 349 LSGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHIGAKELDLQYMKGEQPHCGFPEKN 408

Query: 586 FSTNVEKLARKGYRVLVVEQTETPEQLELRRREKGSKDKV 705
           FS NVEKLARKGYRVLVVEQTETPEQLELRR+EKG KDKV
Sbjct: 409 FSLNVEKLARKGYRVLVVEQTETPEQLELRRKEKGCKDKV 448


>ref|XP_002320307.2| DNA mismatch repair protein MSH6-1 [Populus trichocarpa]
          Length = 1293

 Score =  254 bits (649), Expect = 3e-74
 Identities = 136/220 (61%), Positives = 152/220 (69%)
 Frame = +1

Query: 46  GRGGARKKLSSGKRKVTEKEQMSSVANKKSKIGGELKNGVPEVSAAEKLIDPTKRNSPYS 225
           G+ G R    S KRK + +     +  KK K GG+   G  +VS  E +    K N  ++
Sbjct: 229 GKKGKRGGKDSRKRKASGEGGKLDLG-KKGKSGGDASTGGVKVSVVEPV--KNKENGVFN 285

Query: 226 GKVSLLDSPTVGDGAERFVTRGAGKLRFLEXXXXXXXXXXXXXXXYDPRTLYMPPDFVKG 405
           G     ++  + D +ERF TR A K  FL                YDPRTLY+P +F K 
Sbjct: 286 G----FENALMTDASERFSTREAEKFPFLGRERRDAKRRRPGDVDYDPRTLYLPAEFAKS 341

Query: 406 LTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGFPEKN 585
           LTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKEL LQYMKGEQPHCGFPEKN
Sbjct: 342 LTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKN 401

Query: 586 FSTNVEKLARKGYRVLVVEQTETPEQLELRRREKGSKDKV 705
           FS NVEKLARKGYRVLVVEQTETPEQLELRR+EKGSKDKV
Sbjct: 402 FSLNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKV 441


>ref|XP_010259326.1| PREDICTED: DNA mismatch repair protein MSH6 isoform X1 [Nelumbo
           nucifera]
          Length = 1312

 Score =  254 bits (649), Expect = 3e-74
 Identities = 135/220 (61%), Positives = 156/220 (70%), Gaps = 6/220 (2%)
 Frame = +1

Query: 64  KKLSSGKRKVTEKEQMSSVANKKSKIGGELKNGVPEVS-----AAEKLIDPTK-RNSPYS 225
           K ++SGKRK  E +++ S   KK K  G ++ GV  V+     +  +L++     N  Y 
Sbjct: 233 KNMASGKRKNFEWDKVGS--GKKIKSVGNVEKGVLNVTKVTLDSGSRLVEAASDANRRYV 290

Query: 226 GKVSLLDSPTVGDGAERFVTRGAGKLRFLEXXXXXXXXXXXXXXXYDPRTLYMPPDFVKG 405
             ++   +   GD AERF  R A KLRFL                YDP+TLY+P DF+K 
Sbjct: 291 SHIT--GNTLTGDSAERFALRDAEKLRFLGEGRRDSERRRPGDANYDPKTLYLPSDFLKS 348

Query: 406 LTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGFPEKN 585
           L+GGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAH+GAKEL LQYMKGEQPHCGFPEKN
Sbjct: 349 LSGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHIGAKELDLQYMKGEQPHCGFPEKN 408

Query: 586 FSTNVEKLARKGYRVLVVEQTETPEQLELRRREKGSKDKV 705
           FS NVEKLARKGYRVLVVEQTETPEQLELRR+EKG KDKV
Sbjct: 409 FSLNVEKLARKGYRVLVVEQTETPEQLELRRKEKGCKDKV 448


>gb|POE57964.1| dna mismatch repair protein msh6 [Quercus suber]
          Length = 1211

 Score =  253 bits (646), Expect = 6e-74
 Identities = 136/209 (65%), Positives = 151/209 (72%), Gaps = 1/209 (0%)
 Frame = +1

Query: 82  KRKVTEKEQMSSVANKKSKIGGELKNGVPEVSAAEKLIDPTKRNSPYSGKVSL-LDSPTV 258
           KRK +E E++ S   KK+K G +             L++PT  N+  SGK S  L +   
Sbjct: 230 KRKASEGEKLGSA--KKNKGGFKFS-----------LVEPTSNNAE-SGKASNELGNALR 275

Query: 259 GDGAERFVTRGAGKLRFLEXXXXXXXXXXXXXXXYDPRTLYMPPDFVKGLTGGQRQWWEF 438
           GD  ERF TR A K  FL                YDPRTLY+PPDF+K L+GGQRQWWEF
Sbjct: 276 GDATERFGTREAVKFCFLGEERRDAKRRRPGDANYDPRTLYLPPDFLKSLSGGQRQWWEF 335

Query: 439 KSKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGFPEKNFSTNVEKLARK 618
           KSKHMDKVLFFKMGKFYELFEMDAH+GAKEL LQYMKGEQPHCGFPEKNFS N+EKLARK
Sbjct: 336 KSKHMDKVLFFKMGKFYELFEMDAHIGAKELDLQYMKGEQPHCGFPEKNFSMNLEKLARK 395

Query: 619 GYRVLVVEQTETPEQLELRRREKGSKDKV 705
           GYRVLVVEQTETPEQLELRR+EKGSKDKV
Sbjct: 396 GYRVLVVEQTETPEQLELRRKEKGSKDKV 424


>emb|CBI36942.3| unnamed protein product, partial [Vitis vinifera]
          Length = 1237

 Score =  253 bits (646), Expect = 7e-74
 Identities = 135/217 (62%), Positives = 152/217 (70%)
 Frame = +1

Query: 55  GARKKLSSGKRKVTEKEQMSSVANKKSKIGGELKNGVPEVSAAEKLIDPTKRNSPYSGKV 234
           G  KK+   KRK   +  M S   +KS  GG  KN   +VS+ E + +   R +      
Sbjct: 194 GQSKKVDPKKRKAVGEGTMGSGKRRKSS-GGAEKNTF-KVSSVEPMKNAESRKAS----- 246

Query: 235 SLLDSPTVGDGAERFVTRGAGKLRFLEXXXXXXXXXXXXXXXYDPRTLYMPPDFVKGLTG 414
            +LD+   GD  ERF  R A KL FL                YDPRTLY+PP+F+K LTG
Sbjct: 247 DILDNVLPGDALERFGAREAEKLPFLGGERKDAKRRCPGDANYDPRTLYLPPNFLKNLTG 306

Query: 415 GQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGFPEKNFST 594
           GQRQWWEFKS+HMDKV+FFKMGKFYELFEMDAH+GAKEL LQYMKG QPHCGFPEKNFS 
Sbjct: 307 GQRQWWEFKSRHMDKVIFFKMGKFYELFEMDAHIGAKELDLQYMKGGQPHCGFPEKNFSI 366

Query: 595 NVEKLARKGYRVLVVEQTETPEQLELRRREKGSKDKV 705
           NVEKLARKGYRVLVVEQTETPEQLELRR+EKGSKDKV
Sbjct: 367 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKV 403


>ref|XP_024170159.1| DNA mismatch repair protein MSH6 isoform X3 [Rosa chinensis]
          Length = 1238

 Score =  253 bits (646), Expect = 7e-74
 Identities = 131/216 (60%), Positives = 152/216 (70%), Gaps = 1/216 (0%)
 Frame = +1

Query: 61  RKKLSSGKRKVTEKEQMSSVANKKSKIGGELK-NGVPEVSAAEKLIDPTKRNSPYSGKVS 237
           R+  S GKRK++    + S   KK+K GG +  NG+        LI PT   +  +    
Sbjct: 180 RRGGSGGKRKLSGGGNLGSA--KKTKTGGHVATNGLKP-----NLIQPTTTTTNAAESTK 232

Query: 238 LLDSPTVGDGAERFVTRGAGKLRFLEXXXXXXXXXXXXXXXYDPRTLYMPPDFVKGLTGG 417
            ++   +GD +ERF  R A K RFL                YDPRTLY+PPDF+K L+GG
Sbjct: 233 AVNGINIGDASERFSKREADKFRFLGEKRRDAKKRQPGDANYDPRTLYLPPDFLKNLSGG 292

Query: 418 QRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGFPEKNFSTN 597
           QRQWWEFKSKHMDKVLFFKMGKFYELFEMDAH+GAKEL LQYMKGEQPHCGFPEKNFS +
Sbjct: 293 QRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHIGAKELDLQYMKGEQPHCGFPEKNFSMH 352

Query: 598 VEKLARKGYRVLVVEQTETPEQLELRRREKGSKDKV 705
            EKLARKGYRVLV+EQTETPEQ+ELRR+E GSKDKV
Sbjct: 353 AEKLARKGYRVLVIEQTETPEQMELRRKEGGSKDKV 388


>ref|XP_024170158.1| DNA mismatch repair protein MSH6 isoform X2 [Rosa chinensis]
          Length = 1254

 Score =  253 bits (646), Expect = 7e-74
 Identities = 131/216 (60%), Positives = 152/216 (70%), Gaps = 1/216 (0%)
 Frame = +1

Query: 61  RKKLSSGKRKVTEKEQMSSVANKKSKIGGELK-NGVPEVSAAEKLIDPTKRNSPYSGKVS 237
           R+  S GKRK++    + S   KK+K GG +  NG+        LI PT   +  +    
Sbjct: 205 RRGGSGGKRKLSGGGNLGSA--KKTKTGGHVATNGLKP-----NLIQPTTTTTNAAESTK 257

Query: 238 LLDSPTVGDGAERFVTRGAGKLRFLEXXXXXXXXXXXXXXXYDPRTLYMPPDFVKGLTGG 417
            ++   +GD +ERF  R A K RFL                YDPRTLY+PPDF+K L+GG
Sbjct: 258 AVNGINIGDASERFSKREADKFRFLGEKRRDAKKRQPGDANYDPRTLYLPPDFLKNLSGG 317

Query: 418 QRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGFPEKNFSTN 597
           QRQWWEFKSKHMDKVLFFKMGKFYELFEMDAH+GAKEL LQYMKGEQPHCGFPEKNFS +
Sbjct: 318 QRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHIGAKELDLQYMKGEQPHCGFPEKNFSMH 377

Query: 598 VEKLARKGYRVLVVEQTETPEQLELRRREKGSKDKV 705
            EKLARKGYRVLV+EQTETPEQ+ELRR+E GSKDKV
Sbjct: 378 AEKLARKGYRVLVIEQTETPEQMELRRKEGGSKDKV 413


>ref|XP_024170157.1| DNA mismatch repair protein MSH6 isoform X1 [Rosa chinensis]
 gb|PRQ21660.1| putative DNA mismatch repair protein MutS [Rosa chinensis]
          Length = 1263

 Score =  253 bits (646), Expect = 8e-74
 Identities = 131/216 (60%), Positives = 152/216 (70%), Gaps = 1/216 (0%)
 Frame = +1

Query: 61  RKKLSSGKRKVTEKEQMSSVANKKSKIGGELK-NGVPEVSAAEKLIDPTKRNSPYSGKVS 237
           R+  S GKRK++    + S   KK+K GG +  NG+        LI PT   +  +    
Sbjct: 205 RRGGSGGKRKLSGGGNLGSA--KKTKTGGHVATNGLKP-----NLIQPTTTTTNAAESTK 257

Query: 238 LLDSPTVGDGAERFVTRGAGKLRFLEXXXXXXXXXXXXXXXYDPRTLYMPPDFVKGLTGG 417
            ++   +GD +ERF  R A K RFL                YDPRTLY+PPDF+K L+GG
Sbjct: 258 AVNGINIGDASERFSKREADKFRFLGEKRRDAKKRQPGDANYDPRTLYLPPDFLKNLSGG 317

Query: 418 QRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGEQPHCGFPEKNFSTN 597
           QRQWWEFKSKHMDKVLFFKMGKFYELFEMDAH+GAKEL LQYMKGEQPHCGFPEKNFS +
Sbjct: 318 QRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHIGAKELDLQYMKGEQPHCGFPEKNFSMH 377

Query: 598 VEKLARKGYRVLVVEQTETPEQLELRRREKGSKDKV 705
            EKLARKGYRVLV+EQTETPEQ+ELRR+E GSKDKV
Sbjct: 378 AEKLARKGYRVLVIEQTETPEQMELRRKEGGSKDKV 413


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