BLASTX nr result

ID: Rehmannia31_contig00024972 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00024972
         (509 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN07827.1| hypothetical protein CDL12_19596 [Handroanthus im...   122   4e-29
ref|XP_011073666.1| putative pentatricopeptide repeat-containing...   117   3e-27
ref|XP_011073664.1| putative pentatricopeptide repeat-containing...   117   3e-27
ref|XP_012846672.1| PREDICTED: putative pentatricopeptide repeat...   107   8e-24
ref|XP_022843813.1| pentatricopeptide repeat-containing protein ...    95   2e-19
emb|CDO98336.1| unnamed protein product [Coffea canephora]             59   5e-07

>gb|PIN07827.1| hypothetical protein CDL12_19596 [Handroanthus impetiginosus]
          Length = 667

 Score =  122 bits (306), Expect = 4e-29
 Identities = 65/117 (55%), Positives = 75/117 (64%)
 Frame = +2

Query: 158 MQRVCPKKLNVFCFNCHFRLSVGKPKSLENERFFLFQFHELSKPQLFSTYSHLGSPKIPS 337
           MQRVC KKL V C NCH  LSV KP++L  E   LF+F+E SKP LFSTYSHLGS K P 
Sbjct: 1   MQRVCSKKLCVLCINCHIGLSVVKPRTLGKESLLLFEFYEFSKPLLFSTYSHLGSLKNPQ 60

Query: 338 KVTPTLKPDNHIRKDGVFNTSNEPKKGFHLIRLNNEPGLSTENQIHDHDEFSADVEK 508
           K TP + P       G+      P++GF L+ L  E  LS E+ I DHDEFSADVEK
Sbjct: 61  KFTPDIMP-------GI-----PPREGFDLVHLKREQELSEESHIQDHDEFSADVEK 105


>ref|XP_011073666.1| putative pentatricopeptide repeat-containing protein At5g65820
           isoform X2 [Sesamum indicum]
          Length = 649

 Score =  117 bits (292), Expect = 3e-27
 Identities = 63/117 (53%), Positives = 77/117 (65%)
 Frame = +2

Query: 158 MQRVCPKKLNVFCFNCHFRLSVGKPKSLENERFFLFQFHELSKPQLFSTYSHLGSPKIPS 337
           MQR+C KKL ++       LSVG P+ L  E FFLFQF E SKP  FST+S LGS KIP 
Sbjct: 2   MQRICSKKLCLYSIY-QVHLSVGNPRPLGREPFFLFQFLESSKPLFFSTHSRLGSSKIPP 60

Query: 338 KVTPTLKPDNHIRKDGVFNTSNEPKKGFHLIRLNNEPGLSTENQIHDHDEFSADVEK 508
           K+T  LKP N I K+ +FN  +EP++   LI L N+   STE QI  HD+F+ADVEK
Sbjct: 61  KLTHNLKPGNPISKERIFNRLDEPREVLDLIHLENDTEPSTECQIQTHDDFAADVEK 117


>ref|XP_011073664.1| putative pentatricopeptide repeat-containing protein At5g65820
           isoform X1 [Sesamum indicum]
 ref|XP_011073665.1| putative pentatricopeptide repeat-containing protein At5g65820
           isoform X1 [Sesamum indicum]
          Length = 679

 Score =  117 bits (292), Expect = 3e-27
 Identities = 63/117 (53%), Positives = 77/117 (65%)
 Frame = +2

Query: 158 MQRVCPKKLNVFCFNCHFRLSVGKPKSLENERFFLFQFHELSKPQLFSTYSHLGSPKIPS 337
           MQR+C KKL ++       LSVG P+ L  E FFLFQF E SKP  FST+S LGS KIP 
Sbjct: 2   MQRICSKKLCLYSIY-QVHLSVGNPRPLGREPFFLFQFLESSKPLFFSTHSRLGSSKIPP 60

Query: 338 KVTPTLKPDNHIRKDGVFNTSNEPKKGFHLIRLNNEPGLSTENQIHDHDEFSADVEK 508
           K+T  LKP N I K+ +FN  +EP++   LI L N+   STE QI  HD+F+ADVEK
Sbjct: 61  KLTHNLKPGNPISKERIFNRLDEPREVLDLIHLENDTEPSTECQIQTHDDFAADVEK 117


>ref|XP_012846672.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g65820 [Erythranthe guttata]
          Length = 682

 Score =  107 bits (267), Expect = 8e-24
 Identities = 63/120 (52%), Positives = 78/120 (65%), Gaps = 3/120 (2%)
 Frame = +2

Query: 158 MQRVCPKKLNVFCFNCHFRLSVGKPKSLENERFFLFQFHELSKPQLFSTYSHLGSPKIPS 337
           M RV  KKL V CF+ H R+S  K  +L+N+    F F+E SK   +STYS L SPKIPS
Sbjct: 1   MPRVLSKKLRVLCFSSHVRVSACKANTLKNKFISSFHFNEPSKALHYSTYSRLFSPKIPS 60

Query: 338 -KVTPTLKPDNHIRKDGVFNTSNEPKKGF-HLIRLNNEPGLSTENQIHDHDE-FSADVEK 508
            K+TP L+P N I KDG+FNT N+P KG  +LI L NE    TE +I + D+ F ADVEK
Sbjct: 61  QKLTPPLEPVNPISKDGIFNTMNQPIKGLDNLIHLKNEQESPTEREIQEPDDYFFADVEK 120


>ref|XP_022843813.1| pentatricopeptide repeat-containing protein At3g49730-like [Olea
           europaea var. sylvestris]
          Length = 674

 Score = 95.1 bits (235), Expect = 2e-19
 Identities = 59/117 (50%), Positives = 70/117 (59%)
 Frame = +2

Query: 158 MQRVCPKKLNVFCFNCHFRLSVGKPKSLENERFFLFQFHELSKPQLFSTYSHLGSPKIPS 337
           M RV  KK  V C   +  LS G PK L+    F  +F E SK QLFSTYS L S +IPS
Sbjct: 1   MHRVSSKKFYVICNKYYACLSSGNPKILKKRSSFSIKFIESSKSQLFSTYSRLVSTEIPS 60

Query: 338 KVTPTLKPDNHIRKDGVFNTSNEPKKGFHLIRLNNEPGLSTENQIHDHDEFSADVEK 508
           K  P  + +  I ++G   T  EP+KG  LI LNNEP +STE  I  HDEFS+DVEK
Sbjct: 61  KPIPAHELNKTIPQNG---TLTEPRKGLALIYLNNEPEVSTE--IKSHDEFSSDVEK 112


>emb|CDO98336.1| unnamed protein product [Coffea canephora]
          Length = 571

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 39/83 (46%), Positives = 50/83 (60%)
 Frame = +2

Query: 260 LFQFHELSKPQLFSTYSHLGSPKIPSKVTPTLKPDNHIRKDGVFNTSNEPKKGFHLIRLN 439
           LF FHE SK + FSTYSHLGS +   K        +  ++ G    S+E  KG  LIRL+
Sbjct: 20  LFSFHEPSKSRHFSTYSHLGSAQNSVK-------SSSWKESG--RVSSEAIKGHDLIRLS 70

Query: 440 NEPGLSTENQIHDHDEFSADVEK 508
           +EP  S +++   HDEFSADVEK
Sbjct: 71  SEPESSMDSK--RHDEFSADVEK 91


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