BLASTX nr result

ID: Rehmannia31_contig00024829 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00024829
         (377 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN04888.1| putative membrane protein, predicted efflux pump ...    95   4e-20
ref|XP_012837099.1| PREDICTED: MATE efflux family protein 4, chl...    84   4e-16
ref|XP_011088475.1| protein DETOXIFICATION 46, chloroplastic [Se...    77   5e-14

>gb|PIN04888.1| putative membrane protein, predicted efflux pump [Handroanthus
           impetiginosus]
 gb|PIN07652.1| putative membrane protein, predicted efflux pump [Handroanthus
           impetiginosus]
          Length = 548

 Score = 94.7 bits (234), Expect = 4e-20
 Identities = 49/94 (52%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
 Frame = +3

Query: 96  MNLKTLTHHFHFQ-PHLQTPNQRFNPKLTSLRTSLRIINCRNYRSIITNCSFPGSGTDIV 272
           MNLKTL H F FQ PH+Q P Q+F PK +S +TSLRI+ CR+ R  ITNCS P S T+ V
Sbjct: 1   MNLKTLNHRFQFQCPHIQIPKQKFYPKFSSAKTSLRIVGCRSKRLTITNCSLPSSETENV 60

Query: 273 AQISSIDXXXXXXXXXXXKKQSLGEVSVNNGEEL 374
           A+IS  +           K +  GEVS NNG+EL
Sbjct: 61  AEISLTEEKNGVEVAVVEKMELYGEVSENNGKEL 94


>ref|XP_012837099.1| PREDICTED: MATE efflux family protein 4, chloroplastic-like
           [Erythranthe guttata]
 ref|XP_012837100.1| PREDICTED: MATE efflux family protein 4, chloroplastic-like
           [Erythranthe guttata]
 ref|XP_012837101.1| PREDICTED: MATE efflux family protein 4, chloroplastic-like
           [Erythranthe guttata]
 ref|XP_012837102.1| PREDICTED: MATE efflux family protein 4, chloroplastic-like
           [Erythranthe guttata]
          Length = 547

 Score = 83.6 bits (205), Expect = 4e-16
 Identities = 48/93 (51%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
 Frame = +3

Query: 96  MNLKTLTHHFHFQ---PHLQTPNQRFNPKLTSLRTSLRIINCRNYRSIITNCSFPGSGTD 266
           MNL++ TH+FHF    P+ QTPNQ+FNPKLTS  T LRI +CR    IITNC    SGTD
Sbjct: 1   MNLQSTTHNFHFSFRCPYAQTPNQKFNPKLTSPNTDLRITSCRINHRIITNC----SGTD 56

Query: 267 IVAQISSIDXXXXXXXXXXXKKQSLGEVSVNNG 365
            V Q  S +           K Q+L EVS NNG
Sbjct: 57  GVTQFPSNEEEKEVEVSVLEKMQTLEEVSENNG 89


>ref|XP_011088475.1| protein DETOXIFICATION 46, chloroplastic [Sesamum indicum]
          Length = 547

 Score = 77.4 bits (189), Expect = 5e-14
 Identities = 42/95 (44%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
 Frame = +3

Query: 96  MNLKTLTHHFHFQ-PHLQTPNQRFNPKLTSLRTSLRIINCRNYRSIITNCSFPGSGTDIV 272
           MN +TLTHH HF   + QTPN++FNP   S + S+RI+ CR+ RS+I NC +P  G D  
Sbjct: 1   MNFETLTHHLHFHCSYFQTPNRKFNPNFISPKISVRILRCRDNRSVIRNCGYPSRGVDNP 60

Query: 273 AQISSIDXXXXXXXXXXXKKQSLGEVSVNNGEELS 377
             I   +           K Q  GEVS N  EELS
Sbjct: 61  IHIFPTE-EEKEEAAVVEKMQMFGEVSENIREELS 94


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