BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00024764
         (548 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011071845.1| putative exosome complex component rrp40 [Se...    83   5e-16
ref|XP_012831207.1| PREDICTED: putative exosome complex componen...    79   2e-14
gb|PIN15523.1| Exosomal 3'-5' exoribonuclease complex subunit Rr...    78   3e-14
gb|KZV56559.1| protein binding protein [Dorcoceras hygrometricum]      79   9e-14
ref|XP_022865127.1| putative exosome complex component rrp40 iso...    72   3e-12
ref|XP_022865125.1| putative exosome complex component rrp40 iso...    72   4e-12
emb|CDP12399.1| unnamed protein product [Coffea canephora]             72   8e-12
ref|XP_023743525.1| putative exosome complex component rrp40 [La...    70   4e-11
ref|XP_021651473.1| putative exosome complex component rrp40 [He...    70   4e-11
ref|XP_023923244.1| putative exosome complex component rrp40 [Qu...    69   1e-10
ref|XP_008364612.1| PREDICTED: LOW QUALITY PROTEIN: putative exo...    68   2e-10
ref|XP_008374440.1| PREDICTED: putative exosome complex componen...    68   2e-10
ref|XP_010678759.1| PREDICTED: putative exosome complex componen...    67   4e-10
gb|PIA40546.1| hypothetical protein AQUCO_02500332v1 [Aquilegia ...    67   5e-10
gb|PIA40547.1| hypothetical protein AQUCO_02500332v1 [Aquilegia ...    67   5e-10
ref|XP_021826067.1| putative exosome complex component rrp40 [Pr...    67   6e-10
dbj|GAU43233.1| hypothetical protein TSUD_241230, partial [Trifo...    66   6e-10
gb|KJB30311.1| hypothetical protein B456_005G137000 [Gossypium r...    65   7e-10
gb|PKI66653.1| hypothetical protein CRG98_012995 [Punica granatum]     66   8e-10
ref|XP_003613959.1| exosome complex exonuclease RRP40 [Medicago ...    66   8e-10

>ref|XP_011071845.1| putative exosome complex component rrp40 [Sesamum indicum]
 ref|XP_011071846.1| putative exosome complex component rrp40 [Sesamum indicum]
 ref|XP_011071847.1| putative exosome complex component rrp40 [Sesamum indicum]
          Length = 240

 Score = 82.8 bits (203), Expect = 5e-16
 Identities = 38/43 (88%), Positives = 41/43 (95%)
 Frame = +3

Query: 3   KPSTTPSSFIDQQVFPGDVVMDLSKMVNQTIKLGGGLRQDGDV 131
           KPS +PSSF+DQQVFPGDVV+DLSKM NQTIKLGGGLRQDGDV
Sbjct: 4   KPSVSPSSFVDQQVFPGDVVLDLSKMTNQTIKLGGGLRQDGDV 46


>ref|XP_012831207.1| PREDICTED: putative exosome complex component rrp40 [Erythranthe
           guttata]
 gb|EYU42566.1| hypothetical protein MIMGU_mgv1a012779mg [Erythranthe guttata]
          Length = 240

 Score = 78.6 bits (192), Expect = 2e-14
 Identities = 37/43 (86%), Positives = 39/43 (90%)
 Frame = +3

Query: 3   KPSTTPSSFIDQQVFPGDVVMDLSKMVNQTIKLGGGLRQDGDV 131
           KPS  PSSFIDQQVFPGD+V+DLSKM NQTIKLGGGL QDGDV
Sbjct: 4   KPSVAPSSFIDQQVFPGDLVLDLSKMTNQTIKLGGGLCQDGDV 46


>gb|PIN15523.1| Exosomal 3'-5' exoribonuclease complex subunit Rrp40 [Handroanthus
           impetiginosus]
          Length = 240

 Score = 78.2 bits (191), Expect = 3e-14
 Identities = 35/42 (83%), Positives = 39/42 (92%)
 Frame = +3

Query: 3   KPSTTPSSFIDQQVFPGDVVMDLSKMVNQTIKLGGGLRQDGD 128
           KP  +PSSF+DQQVFPGD+V+DLSKM NQTIKLGGGLRQDGD
Sbjct: 4   KPPISPSSFVDQQVFPGDIVVDLSKMANQTIKLGGGLRQDGD 45


>gb|KZV56559.1| protein binding protein [Dorcoceras hygrometricum]
          Length = 626

 Score = 79.0 bits (193), Expect = 9e-14
 Identities = 35/43 (81%), Positives = 41/43 (95%)
 Frame = +3

Query: 3   KPSTTPSSFIDQQVFPGDVVMDLSKMVNQTIKLGGGLRQDGDV 131
           KPS++P+SF+DQQVFPGDVV+DLS + NQTIKLGGGLRQDGDV
Sbjct: 361 KPSSSPASFVDQQVFPGDVVLDLSNLTNQTIKLGGGLRQDGDV 403


>ref|XP_022865127.1| putative exosome complex component rrp40 isoform X2 [Olea europaea
           var. sylvestris]
          Length = 221

 Score = 72.4 bits (176), Expect = 3e-12
 Identities = 33/42 (78%), Positives = 36/42 (85%)
 Frame = +3

Query: 3   KPSTTPSSFIDQQVFPGDVVMDLSKMVNQTIKLGGGLRQDGD 128
           KPS +PSS +DQ VFPGDVV+DLSKM NQTIKLG  LRQDGD
Sbjct: 4   KPSNSPSSLVDQHVFPGDVVLDLSKMTNQTIKLGSSLRQDGD 45


>ref|XP_022865125.1| putative exosome complex component rrp40 isoform X1 [Olea europaea
           var. sylvestris]
 ref|XP_022865126.1| putative exosome complex component rrp40 isoform X1 [Olea europaea
           var. sylvestris]
          Length = 240

 Score = 72.4 bits (176), Expect = 4e-12
 Identities = 33/42 (78%), Positives = 36/42 (85%)
 Frame = +3

Query: 3   KPSTTPSSFIDQQVFPGDVVMDLSKMVNQTIKLGGGLRQDGD 128
           KPS +PSS +DQ VFPGDVV+DLSKM NQTIKLG  LRQDGD
Sbjct: 4   KPSNSPSSLVDQHVFPGDVVLDLSKMTNQTIKLGSSLRQDGD 45


>emb|CDP12399.1| unnamed protein product [Coffea canephora]
          Length = 240

 Score = 71.6 bits (174), Expect = 8e-12
 Identities = 33/42 (78%), Positives = 37/42 (88%)
 Frame = +3

Query: 3   KPSTTPSSFIDQQVFPGDVVMDLSKMVNQTIKLGGGLRQDGD 128
           KPS++P +FIDQQV PGDVV+DLS M NQTIKLG GLRQDGD
Sbjct: 4   KPSSSPPNFIDQQVVPGDVVLDLSTMTNQTIKLGSGLRQDGD 45


>ref|XP_023743525.1| putative exosome complex component rrp40 [Lactuca sativa]
 gb|PLY66375.1| hypothetical protein LSAT_4X75321 [Lactuca sativa]
          Length = 241

 Score = 69.7 bits (169), Expect = 4e-11
 Identities = 31/40 (77%), Positives = 36/40 (90%)
 Frame = +3

Query: 9   STTPSSFIDQQVFPGDVVMDLSKMVNQTIKLGGGLRQDGD 128
           ST+PS+F+DQ V PGDV++DLS M NQTIKLGGGLRQDGD
Sbjct: 7   STSPSTFVDQLVVPGDVILDLSSMANQTIKLGGGLRQDGD 46


>ref|XP_021651473.1| putative exosome complex component rrp40 [Hevea brasiliensis]
          Length = 241

 Score = 69.7 bits (169), Expect = 4e-11
 Identities = 33/42 (78%), Positives = 36/42 (85%)
 Frame = +3

Query: 3   KPSTTPSSFIDQQVFPGDVVMDLSKMVNQTIKLGGGLRQDGD 128
           KPS++P SFIDQ V PGDVV+DLS M NQTIKLGGGLRQD D
Sbjct: 4   KPSSSPMSFIDQIVVPGDVVLDLSTMTNQTIKLGGGLRQDSD 45


>ref|XP_023923244.1| putative exosome complex component rrp40 [Quercus suber]
 gb|POE97101.1| putative exosome complex component rrp40 [Quercus suber]
          Length = 243

 Score = 68.6 bits (166), Expect = 1e-10
 Identities = 30/42 (71%), Positives = 37/42 (88%)
 Frame = +3

Query: 3   KPSTTPSSFIDQQVFPGDVVMDLSKMVNQTIKLGGGLRQDGD 128
           KP+++P+SF+DQ V PGDVV+DLS M NQT+KLGGGLRQD D
Sbjct: 4   KPTSSPTSFVDQSVVPGDVVLDLSNMTNQTLKLGGGLRQDCD 45


>ref|XP_008364612.1| PREDICTED: LOW QUALITY PROTEIN: putative exosome complex component
           rrp40 [Malus domestica]
          Length = 243

 Score = 67.8 bits (164), Expect = 2e-10
 Identities = 32/42 (76%), Positives = 36/42 (85%)
 Frame = +3

Query: 3   KPSTTPSSFIDQQVFPGDVVMDLSKMVNQTIKLGGGLRQDGD 128
           KPS +P+SFID+ V PGDVV+DLS M NQTIKLGGGLRQD D
Sbjct: 4   KPSGSPASFIDKPVIPGDVVLDLSDMTNQTIKLGGGLRQDFD 45


>ref|XP_008374440.1| PREDICTED: putative exosome complex component rrp40 [Malus
           domestica]
 ref|XP_008346739.1| PREDICTED: putative exosome complex component rrp40 [Malus
           domestica]
 ref|XP_017188529.1| PREDICTED: putative exosome complex component rrp40 [Malus
           domestica]
          Length = 243

 Score = 67.8 bits (164), Expect = 2e-10
 Identities = 32/42 (76%), Positives = 36/42 (85%)
 Frame = +3

Query: 3   KPSTTPSSFIDQQVFPGDVVMDLSKMVNQTIKLGGGLRQDGD 128
           KPS +P+SFID+ V PGDVV+DLS M NQTIKLGGGLRQD D
Sbjct: 4   KPSGSPASFIDKPVIPGDVVLDLSDMTNQTIKLGGGLRQDFD 45


>ref|XP_010678759.1| PREDICTED: putative exosome complex component rrp40 [Beta vulgaris
           subsp. vulgaris]
 gb|KMT10581.1| hypothetical protein BVRB_5g117030 [Beta vulgaris subsp. vulgaris]
          Length = 240

 Score = 67.0 bits (162), Expect = 4e-10
 Identities = 32/43 (74%), Positives = 35/43 (81%)
 Frame = +3

Query: 3   KPSTTPSSFIDQQVFPGDVVMDLSKMVNQTIKLGGGLRQDGDV 131
           K ST P +FI+Q V PGDVV+DLS M  QTIKLGGGLRQDGDV
Sbjct: 4   KSSTPPKNFINQYVVPGDVVLDLSTMAEQTIKLGGGLRQDGDV 46


>gb|PIA40546.1| hypothetical protein AQUCO_02500332v1 [Aquilegia coerulea]
          Length = 234

 Score = 66.6 bits (161), Expect = 5e-10
 Identities = 32/40 (80%), Positives = 34/40 (85%)
 Frame = +3

Query: 9   STTPSSFIDQQVFPGDVVMDLSKMVNQTIKLGGGLRQDGD 128
           S   SSFIDQ V PGDVV+DLSKM+NQTIKLG GLRQDGD
Sbjct: 3   SNASSSFIDQTVVPGDVVLDLSKMINQTIKLGEGLRQDGD 42


>gb|PIA40547.1| hypothetical protein AQUCO_02500332v1 [Aquilegia coerulea]
 gb|PIA40548.1| hypothetical protein AQUCO_02500332v1 [Aquilegia coerulea]
          Length = 237

 Score = 66.6 bits (161), Expect = 5e-10
 Identities = 32/40 (80%), Positives = 34/40 (85%)
 Frame = +3

Query: 9   STTPSSFIDQQVFPGDVVMDLSKMVNQTIKLGGGLRQDGD 128
           S   SSFIDQ V PGDVV+DLSKM+NQTIKLG GLRQDGD
Sbjct: 3   SNASSSFIDQTVVPGDVVLDLSKMINQTIKLGEGLRQDGD 42


>ref|XP_021826067.1| putative exosome complex component rrp40 [Prunus avium]
          Length = 243

 Score = 66.6 bits (161), Expect = 6e-10
 Identities = 31/42 (73%), Positives = 36/42 (85%)
 Frame = +3

Query: 3   KPSTTPSSFIDQQVFPGDVVMDLSKMVNQTIKLGGGLRQDGD 128
           K S +P+SF+DQ V PGDVV+DL+ MVNQTIKLGGGLRQD D
Sbjct: 4   KASGSPASFVDQSVVPGDVVLDLTSMVNQTIKLGGGLRQDCD 45


>dbj|GAU43233.1| hypothetical protein TSUD_241230, partial [Trifolium subterraneum]
          Length = 201

 Score = 65.9 bits (159), Expect = 6e-10
 Identities = 31/43 (72%), Positives = 36/43 (83%)
 Frame = +3

Query: 3   KPSTTPSSFIDQQVFPGDVVMDLSKMVNQTIKLGGGLRQDGDV 131
           K S + ++ IDQ V+PGDVV+DLS M NQTIKLGGGLRQDGDV
Sbjct: 4   KSSGSAANLIDQVVYPGDVVLDLSSMTNQTIKLGGGLRQDGDV 46


>gb|KJB30311.1| hypothetical protein B456_005G137000 [Gossypium raimondii]
          Length = 171

 Score = 65.1 bits (157), Expect = 7e-10
 Identities = 30/42 (71%), Positives = 35/42 (83%)
 Frame = +3

Query: 3   KPSTTPSSFIDQQVFPGDVVMDLSKMVNQTIKLGGGLRQDGD 128
           K S++P+SF+D  V PGDVV+DLS M NQTIKLGGGLRQD D
Sbjct: 4   KQSSSPASFVDSTVVPGDVVLDLSSMTNQTIKLGGGLRQDCD 45


>gb|PKI66653.1| hypothetical protein CRG98_012995 [Punica granatum]
          Length = 240

 Score = 66.2 bits (160), Expect = 8e-10
 Identities = 32/43 (74%), Positives = 35/43 (81%)
 Frame = +3

Query: 3   KPSTTPSSFIDQQVFPGDVVMDLSKMVNQTIKLGGGLRQDGDV 131
           K S +PSS +DQ V PGDVV+DLS M NQTIKLGGGLRQD DV
Sbjct: 4   KSSGSPSSLVDQPVVPGDVVLDLSTMPNQTIKLGGGLRQDADV 46


>ref|XP_003613959.1| exosome complex exonuclease RRP40 [Medicago truncatula]
 gb|ACJ85614.1| unknown [Medicago truncatula]
 gb|AES96917.1| exosome complex exonuclease RRP40 [Medicago truncatula]
 gb|AFK43131.1| unknown [Medicago truncatula]
          Length = 240

 Score = 66.2 bits (160), Expect = 8e-10
 Identities = 30/43 (69%), Positives = 37/43 (86%)
 Frame = +3

Query: 3   KPSTTPSSFIDQQVFPGDVVMDLSKMVNQTIKLGGGLRQDGDV 131
           K + + ++F+DQ V+PGDVV+DLS M NQTIKLGGGLRQDGDV
Sbjct: 4   KSAGSSTNFVDQLVYPGDVVLDLSTMTNQTIKLGGGLRQDGDV 46