BLASTX nr result
ID: Rehmannia31_contig00024560
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia31_contig00024560
(443 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PNX92571.1| histone deacetylase [Trifolium pratense] 135 4e-34
gb|KYP70184.1| Retrovirus-related Pol polyprotein from transposo... 127 9e-34
gb|KYP48079.1| Retrovirus-related Pol polyprotein from transposo... 127 4e-33
gb|KYP59043.1| Retrovirus-related Pol polyprotein from transposo... 128 2e-32
ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424... 130 4e-32
emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera] 129 7e-32
gb|KYP41981.1| Retrovirus-related Pol polyprotein from transposo... 127 8e-32
emb|CAN78509.1| hypothetical protein VITISV_031642 [Vitis vinifera] 128 1e-31
gb|KYP56498.1| Retrovirus-related Pol polyprotein from transposo... 123 1e-31
emb|CAN75728.1| hypothetical protein VITISV_031408 [Vitis vinifera] 128 1e-31
gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposo... 127 3e-31
gb|KYP78025.1| Retrovirus-related Pol polyprotein from transposo... 122 6e-31
gb|PNY02430.1| retrovirus-related Pol polyprotein from transposo... 126 1e-30
gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposo... 125 1e-30
gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposo... 125 1e-30
gb|KYP38387.1| Retrovirus-related Pol polyprotein from transposo... 125 2e-30
ref|XP_015879622.1| PREDICTED: uncharacterized protein LOC107415... 125 2e-30
gb|KYP51497.1| Retrovirus-related Pol polyprotein from transposo... 125 2e-30
gb|KYP40443.1| Retrovirus-related Pol polyprotein from transposo... 123 3e-30
gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposo... 124 3e-30
>gb|PNX92571.1| histone deacetylase [Trifolium pratense]
Length = 1488
Score = 135 bits (341), Expect = 4e-34
Identities = 56/82 (68%), Positives = 69/82 (84%)
Frame = +3
Query: 21 SPFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKCLSPT 200
+P+ +LFKQ PD+ FLKVFGCAC+P LRPY NHKL+FR+ +CLFLGYSPSHKGY+CLSP+
Sbjct: 773 TPYFLLFKQHPDYHFLKVFGCACFPLLRPYHNHKLEFRSQECLFLGYSPSHKGYRCLSPS 832
Query: 201 GHIYISRTVSFNEEDFPYSSLF 266
G +Y+S+ V FNE FPY LF
Sbjct: 833 GRLYVSKDVLFNESRFPYKELF 854
>gb|KYP70184.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 243
Score = 127 bits (320), Expect = 9e-34
Identities = 55/81 (67%), Positives = 65/81 (80%)
Frame = +3
Query: 24 PFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKCLSPTG 203
PF +LFKQ+PD+ FLK FGCAC+P+LRPY HKL FR+ +C+FLGYS SHKGYKCLS +G
Sbjct: 51 PFTVLFKQAPDYKFLKTFGCACFPFLRPYTTHKLDFRSQECVFLGYSNSHKGYKCLSASG 110
Query: 204 HIYISRTVSFNEEDFPYSSLF 266
IYIS+ V FNE FPY LF
Sbjct: 111 KIYISKDVIFNETRFPYLDLF 131
>gb|KYP48079.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 302
Score = 127 bits (320), Expect = 4e-33
Identities = 55/81 (67%), Positives = 65/81 (80%)
Frame = +3
Query: 24 PFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKCLSPTG 203
P+ +LFKQSPD++FLK FGCAC+P LRPY HKL FR+ +C+FLGYS SHKGYKCLSP G
Sbjct: 219 PYTILFKQSPDYTFLKTFGCACFPLLRPYNKHKLDFRSHECVFLGYSTSHKGYKCLSPIG 278
Query: 204 HIYISRTVSFNEEDFPYSSLF 266
I+IS+ V FNE FPY LF
Sbjct: 279 KIFISKDVVFNEYRFPYHELF 299
>gb|KYP59043.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 426
Score = 128 bits (321), Expect = 2e-32
Identities = 55/82 (67%), Positives = 64/82 (78%)
Frame = +3
Query: 9 LGNLSPFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKC 188
L N+SP+Q+LF + PD++FLK FGC CYP LRPY HKL F++ +CLFLGYS HKGYKC
Sbjct: 166 LQNISPYQILFHKPPDYNFLKTFGCGCYPLLRPYNQHKLDFKSHQCLFLGYSNQHKGYKC 225
Query: 189 LSPTGHIYISRTVSFNEEDFPY 254
LSPTG YISR V FNE FPY
Sbjct: 226 LSPTGKCYISRHVKFNESFFPY 247
>ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424043 [Ziziphus jujuba]
Length = 1270
Score = 130 bits (326), Expect = 4e-32
Identities = 53/82 (64%), Positives = 71/82 (86%)
Frame = +3
Query: 21 SPFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKCLSPT 200
SPF++LFK+ PD+ FLKVFG AC+P+LRP+QNHK QF T KC+F+GYS HKGYKC+S +
Sbjct: 841 SPFELLFKKVPDYDFLKVFGSACFPFLRPFQNHKFQFHTEKCVFIGYSDDHKGYKCMSSS 900
Query: 201 GHIYISRTVSFNEEDFPYSSLF 266
G IYI+R+V+FNE++FP+S+ F
Sbjct: 901 GKIYIARSVNFNEKEFPFSTGF 922
>emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera]
Length = 731
Score = 129 bits (324), Expect = 7e-32
Identities = 58/86 (67%), Positives = 67/86 (77%)
Frame = +3
Query: 6 VLGNLSPFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYK 185
+L + SPFQ LF +PD FLK FGC C+P+LRPY +HKLQFR+SKCLFLGYS +HKGY
Sbjct: 72 ILSHDSPFQKLFGCTPDSHFLKTFGCTCFPHLRPYNSHKLQFRSSKCLFLGYSSTHKGYL 131
Query: 186 CLSPTGHIYISRTVSFNEEDFPYSSL 263
CL P G IYISR V FNE +FPYS L
Sbjct: 132 CLHPFGKIYISRNVIFNEHEFPYSEL 157
>gb|KYP41981.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 498
Score = 127 bits (320), Expect = 8e-32
Identities = 55/81 (67%), Positives = 64/81 (79%)
Frame = +3
Query: 24 PFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKCLSPTG 203
P+ +LFKQ PD+ FLK FGCAC+P LRPY NHKL F + +C+FLGYS SHKGYKCLSPTG
Sbjct: 149 PYNVLFKQIPDYKFLKTFGCACFPLLRPYNNHKLNFSSHECVFLGYSSSHKGYKCLSPTG 208
Query: 204 HIYISRTVSFNEEDFPYSSLF 266
I+IS+ V FNE FPY LF
Sbjct: 209 RIFISKDVVFNEYRFPYYDLF 229
>emb|CAN78509.1| hypothetical protein VITISV_031642 [Vitis vinifera]
Length = 722
Score = 128 bits (322), Expect = 1e-31
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 1/88 (1%)
Frame = +3
Query: 6 VLGNL-SPFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGY 182
VL N SPF+ LF PD+SF KVFGC+CYPYLR Y +HK F+++KCLFLGYSP+H GY
Sbjct: 475 VLANFQSPFETLFGSKPDYSFFKVFGCSCYPYLRSYNSHKFSFKSTKCLFLGYSPAHNGY 534
Query: 183 KCLSPTGHIYISRTVSFNEEDFPYSSLF 266
+C S + IY+++ V+FNE DFPYS+LF
Sbjct: 535 RCFSSSNRIYVAKLVTFNENDFPYSTLF 562
>gb|KYP56498.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 297
Score = 123 bits (309), Expect = 1e-31
Identities = 53/81 (65%), Positives = 64/81 (79%)
Frame = +3
Query: 24 PFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKCLSPTG 203
PF +LFKQ+PD++FLK FGC C+ +LRPY HKL FR+ +C+FLGYS SHKGYKCLS +G
Sbjct: 98 PFTVLFKQTPDYNFLKTFGCVCFSFLRPYTTHKLDFRSQECVFLGYSNSHKGYKCLSASG 157
Query: 204 HIYISRTVSFNEEDFPYSSLF 266
IYIS+ V FNE FPY LF
Sbjct: 158 KIYISKDVIFNETRFPYLDLF 178
>emb|CAN75728.1| hypothetical protein VITISV_031408 [Vitis vinifera]
Length = 1099
Score = 128 bits (322), Expect = 1e-31
Identities = 55/87 (63%), Positives = 70/87 (80%), Gaps = 1/87 (1%)
Frame = +3
Query: 6 VLGNL-SPFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGY 182
VL N SPF+ LF D+SF KVFGC+CY YLRPY +HK FR++KCLFLGYSP HKGY
Sbjct: 449 VLANFQSPFKTLFGSKLDYSFFKVFGCSCYSYLRPYNSHKFSFRSTKCLFLGYSPXHKGY 508
Query: 183 KCLSPTGHIYISRTVSFNEEDFPYSSL 263
+CLS +G IY++++++FNE DFPYS+L
Sbjct: 509 RCLSXSGQIYVAKSITFNENDFPYSTL 535
>gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1268
Score = 127 bits (320), Expect = 3e-31
Identities = 55/81 (67%), Positives = 65/81 (80%)
Frame = +3
Query: 24 PFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKCLSPTG 203
PF +LFKQ+PD+ FLK FGCAC+P+LRPY HKL FR+ +C+FLGYS SHKGYKCLS +G
Sbjct: 627 PFTVLFKQTPDYKFLKTFGCACFPFLRPYTTHKLDFRSQECVFLGYSNSHKGYKCLSASG 686
Query: 204 HIYISRTVSFNEEDFPYSSLF 266
IYIS+ V FNE FPY LF
Sbjct: 687 KIYISKDVIFNETRFPYLDLF 707
>gb|KYP78025.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 339
Score = 122 bits (307), Expect = 6e-31
Identities = 52/81 (64%), Positives = 63/81 (77%)
Frame = +3
Query: 24 PFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKCLSPTG 203
P+ +LFK PD+ FLK FGC C+P LRPY HKL +R+ +CLFLGYS +HKGYKCLS TG
Sbjct: 105 PYTILFKTPPDYDFLKSFGCVCFPLLRPYNTHKLDYRSQECLFLGYSHAHKGYKCLSATG 164
Query: 204 HIYISRTVSFNEEDFPYSSLF 266
IYIS+ V FNE+ FPY+ LF
Sbjct: 165 RIYISKDVIFNEQRFPYAHLF 185
>gb|PNY02430.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Trifolium pratense]
Length = 1064
Score = 126 bits (316), Expect = 1e-30
Identities = 52/81 (64%), Positives = 64/81 (79%)
Frame = +3
Query: 24 PFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKCLSPTG 203
P+ +LF Q PD+ FLKVFGCAC+P LRPY HKL +R+ +CLFLGYSPSHKGY+CLSP G
Sbjct: 766 PYTLLFHQDPDYKFLKVFGCACFPLLRPYNTHKLDYRSHECLFLGYSPSHKGYRCLSPNG 825
Query: 204 HIYISRTVSFNEEDFPYSSLF 266
++IS+ V FNE FP+ LF
Sbjct: 826 RLFISKDVIFNESRFPFIDLF 846
>gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1279
Score = 125 bits (315), Expect = 1e-30
Identities = 53/81 (65%), Positives = 65/81 (80%)
Frame = +3
Query: 24 PFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKCLSPTG 203
PF LF +SPD+ FL+ FGCAC+P+LRPY +HKL FR+ +C+FLGYS SHKGYKCLS +G
Sbjct: 571 PFTTLFNKSPDYKFLRTFGCACFPFLRPYASHKLNFRSQECVFLGYSNSHKGYKCLSSSG 630
Query: 204 HIYISRTVSFNEEDFPYSSLF 266
IYIS+ V FNE FPY+ LF
Sbjct: 631 RIYISKDVIFNEHRFPYTDLF 651
>gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1358
Score = 125 bits (315), Expect = 1e-30
Identities = 53/81 (65%), Positives = 65/81 (80%)
Frame = +3
Query: 24 PFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKCLSPTG 203
PF LF +SPD+ FL+ FGCAC+P+LRPY +HKL FR+ +C+FLGYS SHKGYKCLS +G
Sbjct: 650 PFTTLFNKSPDYKFLRTFGCACFPFLRPYASHKLNFRSQECVFLGYSNSHKGYKCLSSSG 709
Query: 204 HIYISRTVSFNEEDFPYSSLF 266
IYIS+ V FNE FPY+ LF
Sbjct: 710 RIYISKDVIFNEHRFPYTDLF 730
>gb|KYP38387.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 600
Score = 125 bits (313), Expect = 2e-30
Identities = 51/86 (59%), Positives = 67/86 (77%)
Frame = +3
Query: 9 LGNLSPFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKC 188
+G+ SP+ ++ + PD+ FLK+FGC+C+P LRPY HK+Q R+ +CLFLGYSP+HKGYKC
Sbjct: 334 IGHQSPYHLIHHKEPDYQFLKIFGCSCFPLLRPYNQHKIQPRSEECLFLGYSPTHKGYKC 393
Query: 189 LSPTGHIYISRTVSFNEEDFPYSSLF 266
LS +G IYIS+ V FNE FPY LF
Sbjct: 394 LSKSGRIYISKDVVFNESRFPYQDLF 419
>ref|XP_015879622.1| PREDICTED: uncharacterized protein LOC107415746 [Ziziphus jujuba]
Length = 884
Score = 125 bits (314), Expect = 2e-30
Identities = 53/87 (60%), Positives = 68/87 (78%)
Frame = +3
Query: 6 VLGNLSPFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYK 185
VL SPFQ ++ Q PD+ FL VFGCACYPYLRPY KLQFRTSKC+F+GYS HKGYK
Sbjct: 433 VLDYKSPFQKVYNQVPDYGFLTVFGCACYPYLRPYHTQKLQFRTSKCVFVGYSTEHKGYK 492
Query: 186 CLSPTGHIYISRTVSFNEEDFPYSSLF 266
+ P+G +Y++++V FNE DFP+++ F
Sbjct: 493 YMHPSGRLYVAKSVKFNEFDFPFAAGF 519
>gb|KYP51497.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 872
Score = 125 bits (313), Expect = 2e-30
Identities = 53/86 (61%), Positives = 69/86 (80%)
Frame = +3
Query: 9 LGNLSPFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKC 188
+G SP++++ + PD++FLKVFGC+C+P LRPY HK+Q R+ +CLFLGYSPSHKGYKC
Sbjct: 334 VGFQSPYKLIHNKDPDYAFLKVFGCSCFPLLRPYNQHKIQPRSEECLFLGYSPSHKGYKC 393
Query: 189 LSPTGHIYISRTVSFNEEDFPYSSLF 266
LS +G IYIS+ V FNE FPY+ LF
Sbjct: 394 LSRSGRIYISKDVIFNEGRFPYNDLF 419
>gb|KYP40443.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 488
Score = 123 bits (309), Expect = 3e-30
Identities = 51/86 (59%), Positives = 69/86 (80%)
Frame = +3
Query: 9 LGNLSPFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKC 188
+G SP++++ + PD++FLK+FGC+C+P LRPY HK+Q R+ +C+FLGYSPSHKGYKC
Sbjct: 203 VGFQSPYKLIHNKDPDYAFLKIFGCSCFPLLRPYNQHKIQPRSEECVFLGYSPSHKGYKC 262
Query: 189 LSPTGHIYISRTVSFNEEDFPYSSLF 266
LS +G IYIS+ V FNE FPY+ LF
Sbjct: 263 LSRSGRIYISKDVIFNEGRFPYNDLF 288
>gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1165
Score = 124 bits (312), Expect = 3e-30
Identities = 54/87 (62%), Positives = 67/87 (77%)
Frame = +3
Query: 6 VLGNLSPFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYK 185
V+ N SP+Q LF ++PD++ +K FGCACYP L+PY HKLQF T+KC+FLGYS SHKGYK
Sbjct: 568 VIKNKSPYQQLFDKNPDYTAMKTFGCACYPCLKPYNQHKLQFHTTKCVFLGYSGSHKGYK 627
Query: 186 CLSPTGHIYISRTVSFNEEDFPYSSLF 266
CL+ TG I+ISR V FNE FP+ F
Sbjct: 628 CLNSTGRIFISRHVVFNEHHFPFHDGF 654