BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00024413
         (550 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_024172036.1| uncharacterized protein LOC112178052 [Rosa c...   135   2e-34
gb|PNX71213.1| ribonuclease H [Trifolium pratense]                    135   2e-33
gb|PNX96793.1| ribonuclease H, partial [Trifolium pratense]           127   2e-31
gb|PNX73375.1| ribonuclease H, partial [Trifolium pratense]           129   3e-31
gb|PNY16050.1| ribonuclease H, partial [Trifolium pratense]           128   7e-31
dbj|GAU35403.1| hypothetical protein TSUD_160540 [Trifolium subt...   125   1e-30
dbj|GAU41445.1| hypothetical protein TSUD_98410 [Trifolium subte...   122   4e-30
gb|PNX96384.1| ribonuclease H, partial [Trifolium pratense]           125   5e-30
dbj|GAU41444.1| hypothetical protein TSUD_98400 [Trifolium subte...   122   6e-30
ref|XP_012836236.1| PREDICTED: uncharacterized protein LOC105956...   125   7e-30
gb|PNX96408.1| hypothetical protein L195_g019614 [Trifolium prat...   124   8e-30
ref|XP_024037590.1| uncharacterized protein LOC112097210 [Citrus...   124   2e-29
gb|PNX95563.1| ribonuclease H, partial [Trifolium pratense]           124   2e-29
gb|EPS61425.1| hypothetical protein M569_13371 [Genlisea aurea]       124   2e-29
gb|PNY07715.1| ribonuclease H [Trifolium pratense]                    124   2e-29
gb|PNY02790.1| ribonuclease H, partial [Trifolium pratense]           123   3e-29
gb|PNX98065.1| ribonuclease H [Trifolium pratense]                    123   3e-29
gb|PNY02482.1| ribonuclease H, partial [Trifolium pratense]           123   3e-29
gb|POE50682.1| putative ribonuclease h protein [Quercus suber]        120   6e-29
gb|PNY03092.1| ribonuclease H [Trifolium pratense]                    122   1e-28

>ref|XP_024172036.1| uncharacterized protein LOC112178052 [Rosa chinensis]
          Length = 441

 Score =  135 bits (340), Expect = 2e-34
 Identities = 67/179 (37%), Positives = 105/179 (58%), Gaps = 4/179 (2%)
 Frame = -1

Query: 550 PNNNNFRPYTRRTNWREDMKVSELLNNGNAEWNENLVHQIFSPDEASSILSIPLRNIWCE 371
           P  N+F+P+T+     E++KV +L+  G  EWN  L+ ++F+P EA+ I  IPL     +
Sbjct: 20  PLPNSFKPFTKSAVGLEELKVCDLILEGEHEWNIPLLEELFTPYEAAIIAGIPLSIRGGD 79

Query: 370 DSWAWHFTANGLYSVKSGYKIGLILDSRFSDRPSSS----GNSSAMWKWIWSLSVPPKVQ 203
           D+  WHF   G Y V+SGY +  I + R +DR S+S    G + + WK IW  ++PPKV+
Sbjct: 80  DTLQWHFDRRGNYGVRSGYHVAQIEEGR-ADRASTSLGTCGINPSYWKAIWGANIPPKVR 138

Query: 202 VFIWKIFHRAIPVKATLDQKKSVPNPFCERCNMAIETIEHTLRDCPWSLFYWQASPLRL 26
           VF+W++    +P +A L  K S+P+  C  CN +I+   H  RDC  + ++W  + L L
Sbjct: 139 VFVWRLLKGILPTRAGLSHKVSLPDDHCVFCNQSIDDGLHVFRDCDVTSYFWLLTTLGL 197


>gb|PNX71213.1| ribonuclease H [Trifolium pratense]
          Length = 951

 Score =  135 bits (341), Expect = 2e-33
 Identities = 63/182 (34%), Positives = 103/182 (56%), Gaps = 1/182 (0%)
 Frame = -1

Query: 550  PNNNNFRPYTRRTNWREDMKVSELLNNGNAEWNENLVHQIFSPDEASSILSIPLRNIWCE 371
            P  N F+ ++ +  +     V +L+N    +WN+NL+HQIF P EA+ IL +PL     +
Sbjct: 521  PKQNGFKVWSTQQGYTRYNLVKDLINPATNQWNQNLIHQIFLPFEANQILQLPLVEPNSK 580

Query: 370  DSWAWHFTANGLYSVKSGYKIGLILDSRFSDRPSSSGNSSAM-WKWIWSLSVPPKVQVFI 194
            D   W  T +GLY+VKSGY   +  +    ++ SS+  ++ + W+ +W L +PPK    I
Sbjct: 581  DELVWSGTKDGLYTVKSGYHAAMEWNHLRHNQVSSNAIATDLTWQNLWKLKIPPKHATLI 640

Query: 193  WKIFHRAIPVKATLDQKKSVPNPFCERCNMAIETIEHTLRDCPWSLFYWQASPLRLDSTI 14
            W+I + ++PV+++L  K    NP C RCN ++ETI+H    C W+   W  SP+ +    
Sbjct: 641  WRILNHSLPVRSSLSSKGIQCNPTCPRCNTSLETIDHVFMQCEWAKVVWFGSPMTIHFNT 700

Query: 13   TN 8
            T+
Sbjct: 701  TD 702


>gb|PNX96793.1| ribonuclease H, partial [Trifolium pratense]
          Length = 463

 Score =  127 bits (320), Expect = 2e-31
 Identities = 62/159 (38%), Positives = 94/159 (59%), Gaps = 1/159 (0%)
 Frame = -1

Query: 496 MKVSELLNNGNAEWNENLVHQIFSPDEASSILSIPLRNIWCEDSWAWHFTANGLYSVKSG 317
           +KV EL++N   EWNE++++Q+F+  +A  IL IP+ +    D+  W  T +G+YSVKSG
Sbjct: 56  IKVKELMDNNYNEWNESIINQVFTSYDAQMILQIPIIDKTQPDTLTWDDTKDGIYSVKSG 115

Query: 316 YKIGLILDSRFSDRPSSSGNSSA-MWKWIWSLSVPPKVQVFIWKIFHRAIPVKATLDQKK 140
           Y   +  DS  +   ++S N    +WK +W   VPPK    +W+I + AIPVK  L +K 
Sbjct: 116 YHAIIDWDSNSNTNNAASSNRPMEIWKTLWKFKVPPKYSHLLWRILNNAIPVKGNLFKKG 175

Query: 139 SVPNPFCERCNMAIETIEHTLRDCPWSLFYWQASPLRLD 23
              +P C RC   +E+I+H   +C W+   W ASPL L+
Sbjct: 176 VKCDPLCPRCLNHVESIQHVFLECEWAKKVWFASPLTLN 214


>gb|PNX73375.1| ribonuclease H, partial [Trifolium pratense]
          Length = 925

 Score =  129 bits (324), Expect = 3e-31
 Identities = 64/159 (40%), Positives = 94/159 (59%), Gaps = 1/159 (0%)
 Frame = -1

Query: 496 MKVSELLNNGNAEWNENLVHQIFSPDEASSILSIPLRNIWCEDSWAWHFTANGLYSVKSG 317
           + V EL+ N   EWNE +++Q+F+P  A  IL IP+ +    D+  W  T +G+YSVKSG
Sbjct: 522 LMVKELMENNYNEWNETIINQVFTPYVAQMILQIPIIDKTQPDTLTWDGTKDGIYSVKSG 581

Query: 316 YKIGLILDSRFSDRPSSSGNSSA-MWKWIWSLSVPPKVQVFIWKIFHRAIPVKATLDQKK 140
           Y   +  +S  +   ++S NSS  +WK +W L VPPK    +W+I + AIPVK  L +K 
Sbjct: 582 YHAIIDWNSNSNTNNAASSNSSMEIWKTLWKLKVPPKYSHLLWRILNNAIPVKGNLFKKG 641

Query: 139 SVPNPFCERCNMAIETIEHTLRDCPWSLFYWQASPLRLD 23
              +P C RC   +E+I+H   +C W+   W ASPL L+
Sbjct: 642 VKCDPLCPRCLNHMESIQHVFLECEWAKKVWFASPLTLN 680


>gb|PNY16050.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1066

 Score =  128 bits (321), Expect = 7e-31
 Identities = 67/160 (41%), Positives = 95/160 (59%), Gaps = 3/160 (1%)
 Frame = -1

Query: 493  KVSELLNNGNAEWNENLVHQIFSPDEASSILSIPLRNIWCEDSWAWHFTANGLYSVKSGY 314
            KV EL++N   EWN ++++Q+F+P EA  IL IP+ +    D+  W  T +G YSVKSGY
Sbjct: 868  KVKELMDNNYNEWNASIINQVFNPYEAHMILQIPILDKTQPDTLTWDGTRDGTYSVKSGY 927

Query: 313  KIGLILD---SRFSDRPSSSGNSSAMWKWIWSLSVPPKVQVFIWKIFHRAIPVKATLDQK 143
                I+D   +  S+  +SS  S  +WK +W L+VPPK    IW+    AIPVK +L ++
Sbjct: 928  HA--IIDWANNSNSNNATSSNCSMEIWKVLWKLNVPPKHSHLIWRSLRNAIPVKGSLFKR 985

Query: 142  KSVPNPFCERCNMAIETIEHTLRDCPWSLFYWQASPLRLD 23
                +P C RC   +ETI+H   DC W+   W ASPL L+
Sbjct: 986  GIRCDPLCPRCLDHVETIQHVFMDCEWTKKVWFASPLTLN 1025


>dbj|GAU35403.1| hypothetical protein TSUD_160540 [Trifolium subterraneum]
          Length = 440

 Score =  125 bits (313), Expect = 1e-30
 Identities = 62/166 (37%), Positives = 91/166 (54%), Gaps = 3/166 (1%)
 Frame = -1

Query: 493 KVSELLNNGNAEWNENLVHQIFSPDEASSILSIPLRNIWCEDSWAWHFTANGLYSVKSGY 314
           KV EL++    +W +++++Q F P EA  I  IPL N   +D   W  T +G YSVKSGY
Sbjct: 79  KVKELIDPATNQWKQSIINQAFLPFEAQQIGQIPLVNTKTQDELTWFDTKDGTYSVKSGY 138

Query: 313 KIGLILDSRFSDRPSSSGNSSAM---WKWIWSLSVPPKVQVFIWKIFHRAIPVKATLDQK 143
           +   I+D    +  +S  N+ A+   W  +W   +PPK    +W+I H+A+PVK  L+ K
Sbjct: 139 QA--IMDWATLNNENSGSNTLAIDPTWNKLWKQKIPPKQAHLLWRILHQALPVKNNLNSK 196

Query: 142 KSVPNPFCERCNMAIETIEHTLRDCPWSLFYWQASPLRLDSTITNP 5
               NP C RCN ++ETI+H    C W    W  SP+ +    T+P
Sbjct: 197 GIHCNPICPRCNNSLETIDHVFMHCEWVKGVWFGSPMTIQFNETHP 242


>dbj|GAU41445.1| hypothetical protein TSUD_98410 [Trifolium subterraneum]
          Length = 329

 Score =  122 bits (305), Expect = 4e-30
 Identities = 62/158 (39%), Positives = 94/158 (59%), Gaps = 1/158 (0%)
 Frame = -1

Query: 493 KVSELLNNGNAEWNENLVHQIFSPDEASSILSIPLRNIWCEDSWAWHFTANGLYSVKSGY 314
           KV +++N  +  WNE L++Q+F P EA  I  IP+ +    D+  W  T +G YSVKSGY
Sbjct: 57  KVKDIMNPHSNSWNEPLINQLFIPIEAKMICQIPIIDKTQHDALTWDGTLDGNYSVKSGY 116

Query: 313 K-IGLILDSRFSDRPSSSGNSSAMWKWIWSLSVPPKVQVFIWKIFHRAIPVKATLDQKKS 137
           + I   ++S  ++  SSS  S+ +W+ +W L+VPPK   FIW++ + A+PVK  L +K  
Sbjct: 117 QAIMNWVESTTTNTTSSSAMSNNIWQILWKLNVPPKHSHFIWRLLNEALPVKGNLFKKGI 176

Query: 136 VPNPFCERCNMAIETIEHTLRDCPWSLFYWQASPLRLD 23
             +P C RC+  +ET  H   DC W+   W AS L ++
Sbjct: 177 RCDPLCPRCSNHVETSHHVFLDCVWAKQVWFASSLTIN 214


>gb|PNX96384.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1376

 Score =  125 bits (315), Expect = 5e-30
 Identities = 62/157 (39%), Positives = 90/157 (57%)
 Frame = -1

Query: 493  KVSELLNNGNAEWNENLVHQIFSPDEASSILSIPLRNIWCEDSWAWHFTANGLYSVKSGY 314
            KV EL++  N  W E++++QIF P EA  IL IP+ +    D+  W  T +G+YSVKSGY
Sbjct: 967  KVQELMDTNNNAWKEDIINQIFQPYEAQMILKIPIMDKAQPDTLTWDNTQDGIYSVKSGY 1026

Query: 313  KIGLILDSRFSDRPSSSGNSSAMWKWIWSLSVPPKVQVFIWKIFHRAIPVKATLDQKKSV 134
                I++   +   ++S NS  +WK IW L+VPPK    +W++   A+PVK  L ++   
Sbjct: 1027 HS--IMEWSHTLNATTSNNSQDLWKAIWKLNVPPKHTHLLWRVLKNALPVKNNLFKRGVR 1084

Query: 133  PNPFCERCNMAIETIEHTLRDCPWSLFYWQASPLRLD 23
             +P C RC   +ET  H   DC W+   W AS L L+
Sbjct: 1085 CDPLCPRCTNCLETTNHVFLDCEWTKQVWFASSLNLN 1121


>dbj|GAU41444.1| hypothetical protein TSUD_98400 [Trifolium subterraneum]
          Length = 362

 Score =  122 bits (305), Expect = 6e-30
 Identities = 62/158 (39%), Positives = 94/158 (59%), Gaps = 1/158 (0%)
 Frame = -1

Query: 493 KVSELLNNGNAEWNENLVHQIFSPDEASSILSIPLRNIWCEDSWAWHFTANGLYSVKSGY 314
           KV +++N  +  WNE L++Q+F P EA  I  IP+ +    D+  W  T +G YSVKSGY
Sbjct: 57  KVKDIMNPHSNSWNEPLINQLFIPIEAKMICQIPIIDKTQHDALTWDGTLDGNYSVKSGY 116

Query: 313 K-IGLILDSRFSDRPSSSGNSSAMWKWIWSLSVPPKVQVFIWKIFHRAIPVKATLDQKKS 137
           + I   ++S  ++  SSS  S+ +W+ +W L+VPPK   FIW++ + A+PVK  L +K  
Sbjct: 117 QAIMNWVESTTTNTTSSSAMSNNIWQILWKLNVPPKHSHFIWRLLNEALPVKGNLFKKGI 176

Query: 136 VPNPFCERCNMAIETIEHTLRDCPWSLFYWQASPLRLD 23
             +P C RC+  +ET  H   DC W+   W AS L ++
Sbjct: 177 RCDPLCPRCSNHVETSHHVFLDCVWAKQVWFASSLTIN 214


>ref|XP_012836236.1| PREDICTED: uncharacterized protein LOC105956874 [Erythranthe
           guttata]
          Length = 695

 Score =  125 bits (313), Expect = 7e-30
 Identities = 57/167 (34%), Positives = 92/167 (55%), Gaps = 3/167 (1%)
 Frame = -1

Query: 550 PNNNNFRPYTRRTNWREDMKVSELLNNGNAEWNENLVHQIFSPDEASSILSIPLRNIWCE 371
           P    F+ +T R NW  DMKV  L++     W  N++  +F  ++  SILSIP+ +   E
Sbjct: 362 PRERTFKVFTPRENWPIDMKVQSLIDGNTGLWKVNMIASMFYEEDRKSILSIPIGSAINE 421

Query: 370 DSWAWHFTANGLYSVKSGYKIGLILDSRFSDRPSSSGN---SSAMWKWIWSLSVPPKVQV 200
           D   WH+  NGL+SV+S Y   + L+   +    +SG+   SS  WKW+W L++P K+++
Sbjct: 422 DRLIWHYNKNGLFSVRSAYHTAVHLEQEKAGVNIASGSSLVSSRSWKWLWDLNLPNKIKI 481

Query: 199 FIWKIFHRAIPVKATLDQKKSVPNPFCERCNMAIETIEHTLRDCPWS 59
           F+W+  +  +P +  L  +K + N  CE C  A E + H L  C ++
Sbjct: 482 FLWRCCNNLLPTRQNLTNRKILENSLCEICGAAEEDVLHCLSLCSFA 528


>gb|PNX96408.1| hypothetical protein L195_g019614 [Trifolium pratense]
          Length = 548

 Score =  124 bits (311), Expect = 8e-30
 Identities = 62/158 (39%), Positives = 91/158 (57%)
 Frame = -1

Query: 496 MKVSELLNNGNAEWNENLVHQIFSPDEASSILSIPLRNIWCEDSWAWHFTANGLYSVKSG 317
           +KV EL+++   EWN ++++Q+F P EA  IL+IP+ +    D   W  T +G YSVKSG
Sbjct: 239 IKVKELMDSNYNEWNTDIINQVFLPYEAQMILNIPIIDKTQPDMLTWDCTQDGQYSVKSG 298

Query: 316 YKIGLILDSRFSDRPSSSGNSSAMWKWIWSLSVPPKVQVFIWKIFHRAIPVKATLDQKKS 137
           Y    I++       S S NS  +W  +W L VPPK    +W++ H A+PVK  L ++  
Sbjct: 299 YHA--IMEWGNLPNASPSNNSQHIWNVLWKLKVPPKHSHLLWRVLHNALPVKNNLFKRGV 356

Query: 136 VPNPFCERCNMAIETIEHTLRDCPWSLFYWQASPLRLD 23
             +P C RC+ ++ETI H   DC W+   W AS L L+
Sbjct: 357 RCDPLCPRCSNSMETIHHVFLDCEWAKQTWFASALTLN 394


>ref|XP_024037590.1| uncharacterized protein LOC112097210 [Citrus clementina]
          Length = 1154

 Score =  124 bits (311), Expect = 2e-29
 Identities = 59/173 (34%), Positives = 99/173 (57%)
 Frame = -1

Query: 550  PNNNNFRPYTRRTNWREDMKVSELLNNGNAEWNENLVHQIFSPDEASSILSIPLRNIWCE 371
            P    F+P +   +   D  V+EL++    +W E+L+ Q F P++A +I+ IPL     E
Sbjct: 740  PRPTTFKPISA-PSMGTDTTVAELIDE-KQQWREDLILQHFRPEDAEAIMQIPLPKRPKE 797

Query: 370  DSWAWHFTANGLYSVKSGYKIGLILDSRFSDRPSSSGNSSAMWKWIWSLSVPPKVQVFIW 191
            D   WH+   G YSVKSGY++ + +  +F + PS S +   +W++IW L++P KV++F+W
Sbjct: 798  DQLIWHYDKKGYYSVKSGYQVAMRI--KFPEDPSCSNHDQNLWRFIWKLAIPEKVKIFLW 855

Query: 190  KIFHRAIPVKATLDQKKSVPNPFCERCNMAIETIEHTLRDCPWSLFYWQASPL 32
            +  H  +P    L +KK +  P C+ C+  +ET+ H L +C  +   W+ S L
Sbjct: 856  RAAHDLLPTAENLWKKKVLQEPMCQSCHCHVETVSHALVECNRARKIWRYSNL 908


>gb|PNX95563.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1188

 Score =  124 bits (311), Expect = 2e-29
 Identities = 62/158 (39%), Positives = 91/158 (57%)
 Frame = -1

Query: 496  MKVSELLNNGNAEWNENLVHQIFSPDEASSILSIPLRNIWCEDSWAWHFTANGLYSVKSG 317
            +KV EL+++   EWN ++++Q+F P EA  IL+IP+ +    D   W  T +G YSVKSG
Sbjct: 781  IKVKELMDSNYNEWNTDIINQVFLPYEAQMILNIPIIDKTQPDMLTWDCTQDGQYSVKSG 840

Query: 316  YKIGLILDSRFSDRPSSSGNSSAMWKWIWSLSVPPKVQVFIWKIFHRAIPVKATLDQKKS 137
            Y    I++       S S NS  +W  +W L VPPK    +W++ H A+PVK  L ++  
Sbjct: 841  YHA--IMEWGNLPNASPSNNSQHIWNVLWKLKVPPKHSHLLWRVLHNALPVKNNLFKRGV 898

Query: 136  VPNPFCERCNMAIETIEHTLRDCPWSLFYWQASPLRLD 23
              +P C RC+ ++ETI H   DC W+   W AS L L+
Sbjct: 899  RCDPLCPRCSNSMETIHHVFLDCEWAKQTWFASALTLN 936


>gb|EPS61425.1| hypothetical protein M569_13371 [Genlisea aurea]
          Length = 1255

 Score =  124 bits (310), Expect = 2e-29
 Identities = 61/169 (36%), Positives = 91/169 (53%), Gaps = 1/169 (0%)
 Frame = -1

Query: 550  PNNNNFRPYTRRTNWREDMKVSELLNNGNAEWNENLVHQIFSPDEASSILSIPLRNIWCE 371
            P    F+P  +R      ++VS+L+N G  +WN +L+  +F P +ASSILSIPL      
Sbjct: 836  PRMGFFKPIYKRPELPPTLRVSDLINPGTRDWNRSLIRHLFLPIDASSILSIPLGTGRHP 895

Query: 370  DSWAWHFTANGLYSVKSGYKIGLILDSRFSDRPS-SSGNSSAMWKWIWSLSVPPKVQVFI 194
            D   WHF+ +G YSVKSGYK     +      P+ SS   SA WK +W +++PPK+ +F 
Sbjct: 896  DRLIWHFSKDGAYSVKSGYKRAWSTEHLRCPGPAHSSDTFSAFWKQLWRIALPPKILLFA 955

Query: 193  WKIFHRAIPVKATLDQKKSVPNPFCERCNMAIETIEHTLRDCPWSLFYW 47
            W++    +P KA L ++    +  CE C+   E   H +   PW+   W
Sbjct: 956  WRLCRNILPTKALLRRRNVCRDSQCEVCDQEEENWHHAIATYPWAKLVW 1004


>gb|PNY07715.1| ribonuclease H [Trifolium pratense]
          Length = 1567

 Score =  124 bits (310), Expect = 2e-29
 Identities = 67/179 (37%), Positives = 93/179 (51%), Gaps = 2/179 (1%)
 Frame = -1

Query: 547  NNNNFRPYTRRTNWREDMKVSELLNNGNAEWNENLVHQIFSPDEASSILSIPLRNIWCED 368
            N+  + P    TN     KV +L+N     WNE ++ + F P EA+ IL IPL N   ED
Sbjct: 1126 NSTTWTPKPINTNLE---KVKDLINPTTHTWNEPVISKTFFPIEANQILQIPLSNTMTED 1182

Query: 367  SWAWHFTANGLYSVKSGYKIGLILDSRFSDRPSSSGN--SSAMWKWIWSLSVPPKVQVFI 194
              +W  T +G Y+VKSGY   +   +  S +  +S N      W  IW++ VPPK    +
Sbjct: 1183 IISWQGTKDGNYTVKSGYNAQMEWANVESSQAQTSNNHKDEPFWNKIWNIKVPPKQIHLL 1242

Query: 193  WKIFHRAIPVKATLDQKKSVPNPFCERCNMAIETIEHTLRDCPWSLFYWQASPLRLDST 17
            W+I H AIPVK  L +K  + +  C RCN   ETI+H    C W+   W  SPL + +T
Sbjct: 1243 WRIMHNAIPVKTNLIKKGILIDSLCPRCNKGPETIDHLFLHCEWAHLVWFYSPLTIKTT 1301


>gb|PNY02790.1| ribonuclease H, partial [Trifolium pratense]
          Length = 916

 Score =  123 bits (309), Expect = 3e-29
 Identities = 64/159 (40%), Positives = 92/159 (57%), Gaps = 1/159 (0%)
 Frame = -1

Query: 496  MKVSELLNNGNAEWNENLVHQIFSPDEASSILSIPLRNIWCEDSWAWHFTANGLYSVKSG 317
            +KV EL+++   +WN  +++QIF+P EA  I  IP+ +    D   W  T +G YSVKSG
Sbjct: 602  IKVKELMDDNYNDWNVTIINQIFNPYEAHMIQQIPILDKTQSDILTWDGTRDGHYSVKSG 661

Query: 316  YKIGLILDSRFSDRPSSSGNSSA-MWKWIWSLSVPPKVQVFIWKIFHRAIPVKATLDQKK 140
            Y+  +       +  ++S NSS  +WK +W L+VPPK   FIW+    AIPVK  L +K 
Sbjct: 662  YQAIMEWAKNSDNNNATSSNSSMEIWKVLWKLNVPPKHSHFIWRCLSNAIPVKGKLFKKG 721

Query: 139  SVPNPFCERCNMAIETIEHTLRDCPWSLFYWQASPLRLD 23
               +P C RC   +ETI+H   +C W+   W ASPL L+
Sbjct: 722  IRCDPLCPRCLNHVETIQHVFLECDWAKKVWFASPLTLN 760


>gb|PNX98065.1| ribonuclease H [Trifolium pratense]
          Length = 1011

 Score =  123 bits (309), Expect = 3e-29
 Identities = 64/159 (40%), Positives = 92/159 (57%), Gaps = 1/159 (0%)
 Frame = -1

Query: 496  MKVSELLNNGNAEWNENLVHQIFSPDEASSILSIPLRNIWCEDSWAWHFTANGLYSVKSG 317
            +KV EL+++   +WN  +++QIF+P EA  I  IP+ +    D   W  T +G YSVKSG
Sbjct: 602  IKVKELMDDNYNDWNVTIINQIFNPYEAHMIQQIPILDKTQSDILTWDGTRDGHYSVKSG 661

Query: 316  YKIGLILDSRFSDRPSSSGNSSA-MWKWIWSLSVPPKVQVFIWKIFHRAIPVKATLDQKK 140
            Y+  +       +  ++S NSS  +WK +W L+VPPK   FIW+    AIPVK  L +K 
Sbjct: 662  YQAIMEWAKNSDNNNATSSNSSMEIWKVLWKLNVPPKHSHFIWRCLSNAIPVKGKLFKKG 721

Query: 139  SVPNPFCERCNMAIETIEHTLRDCPWSLFYWQASPLRLD 23
               +P C RC   +ETI+H   +C W+   W ASPL L+
Sbjct: 722  IRCDPLCPRCLNHVETIQHVFLECDWAKKVWFASPLTLN 760


>gb|PNY02482.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1070

 Score =  123 bits (309), Expect = 3e-29
 Identities = 64/159 (40%), Positives = 92/159 (57%), Gaps = 1/159 (0%)
 Frame = -1

Query: 496  MKVSELLNNGNAEWNENLVHQIFSPDEASSILSIPLRNIWCEDSWAWHFTANGLYSVKSG 317
            +KV EL+++   +WN  +++QIF+P EA  I  IP+ +    D   W  T +G YSVKSG
Sbjct: 756  IKVKELMDDNYNDWNVTIINQIFNPYEAHMIQQIPILDKTQSDILTWDGTRDGHYSVKSG 815

Query: 316  YKIGLILDSRFSDRPSSSGNSSA-MWKWIWSLSVPPKVQVFIWKIFHRAIPVKATLDQKK 140
            Y+  +       +  ++S NSS  +WK +W L+VPPK   FIW+    AIPVK  L +K 
Sbjct: 816  YQAIMEWAKNSDNNNATSSNSSMEIWKVLWKLNVPPKHSHFIWRCLSNAIPVKGKLFKKG 875

Query: 139  SVPNPFCERCNMAIETIEHTLRDCPWSLFYWQASPLRLD 23
               +P C RC   +ETI+H   +C W+   W ASPL L+
Sbjct: 876  IRCDPLCPRCLNHVETIQHVFLECDWAKKVWFASPLTLN 914


>gb|POE50682.1| putative ribonuclease h protein [Quercus suber]
          Length = 425

 Score =  120 bits (301), Expect = 6e-29
 Identities = 66/173 (38%), Positives = 95/173 (54%), Gaps = 8/173 (4%)
 Frame = -1

Query: 529 PYTRRTNWR--------EDMKVSELLNNGNAEWNENLVHQIFSPDEASSILSIPLRNIWC 374
           PY +   W         EDM+VSEL++  + +W++NL+H +F+P EA  I SIPL     
Sbjct: 149 PYKKYQTWVSSHVVQGFEDMRVSELIDPVSRKWDQNLLHGLFTPHEAEIIASIPLCLTKE 208

Query: 373 EDSWAWHFTANGLYSVKSGYKIGLILDSRFSDRPSSSGNSSAMWKWIWSLSVPPKVQVFI 194
           ED   W FT +G Y+VKS  K  L  +   S + S + N + +WK IW LSVP KV+ F+
Sbjct: 209 EDVVVWPFTPSGCYTVKSSSKF-LAEEQCRSQQSSFTHNDNGLWKMIWGLSVPRKVRNFL 267

Query: 193 WKIFHRAIPVKATLDQKKSVPNPFCERCNMAIETIEHTLRDCPWSLFYWQASP 35
           W+    A+PVK  L ++  +    CE C M +E I H+L +C      W + P
Sbjct: 268 WRACQNALPVKYNLKRRHILTEDTCEACKMEVEDIYHSLWECNQLTQLWGSIP 320


>gb|PNY03092.1| ribonuclease H [Trifolium pratense]
          Length = 970

 Score =  122 bits (305), Expect = 1e-28
 Identities = 61/172 (35%), Positives = 94/172 (54%)
 Frame = -1

Query: 538  NFRPYTRRTNWREDMKVSELLNNGNAEWNENLVHQIFSPDEASSILSIPLRNIWCEDSWA 359
            N   ++ + N     KV +++N  N  WNE +++Q+F P EA  IL IP+      D+  
Sbjct: 549  NSSTWSSKPNLTTHHKVKDIMNIHNNSWNETIINQLFLPIEAQKILQIPITGTSQPDALI 608

Query: 358  WHFTANGLYSVKSGYKIGLILDSRFSDRPSSSGNSSAMWKWIWSLSVPPKVQVFIWKIFH 179
            W  T +G Y+VKSGY+   I +   S + S+S N+  +W  +W L++PPK    +W+  +
Sbjct: 609  WAGTIDGHYTVKSGYQA--ITEWSESTQASTSANNDDIWPMLWKLNIPPKHSHLLWRALN 666

Query: 178  RAIPVKATLDQKKSVPNPFCERCNMAIETIEHTLRDCPWSLFYWQASPLRLD 23
             AIPVK  L +K    +P C RC   +ETI H   DC W+   W +S L ++
Sbjct: 667  EAIPVKGNLFKKGVKCDPLCPRCFNHVETIHHAFLDCVWAKQMWFSSNLTIN 718