BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00023608
         (935 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN05284.1| hypothetical protein CDL12_22173 [Handroanthus im...   524   0.0  
ref|XP_011080694.1| pentatricopeptide repeat-containing protein ...   520   e-179
ref|XP_012836785.1| PREDICTED: pentatricopeptide repeat-containi...   516   e-178
ref|XP_022874887.1| pentatricopeptide repeat-containing protein ...   500   e-171
gb|KZV54221.1| chlororespiratory reduction 2 family protein [Dor...   490   e-168
ref|XP_018855574.1| PREDICTED: pentatricopeptide repeat-containi...   470   e-160
ref|XP_011032227.1| PREDICTED: pentatricopeptide repeat-containi...   468   e-159
ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containi...   468   e-159
ref|XP_002313416.2| chlororespiratory reduction 2 family protein...   466   e-158
ref|XP_023910915.1| pentatricopeptide repeat-containing protein ...   466   e-158
ref|XP_023910914.1| pentatricopeptide repeat-containing protein ...   466   e-158
emb|CDP09112.1| unnamed protein product [Coffea canephora]            462   e-157
ref|XP_021642595.1| pentatricopeptide repeat-containing protein ...   462   e-156
ref|XP_012471277.1| PREDICTED: pentatricopeptide repeat-containi...   460   e-156
gb|PPD69149.1| hypothetical protein GOBAR_DD33973 [Gossypium bar...   460   e-156
ref|XP_016740545.1| PREDICTED: pentatricopeptide repeat-containi...   460   e-156
ref|XP_017638570.1| PREDICTED: pentatricopeptide repeat-containi...   459   e-155
gb|PPS07722.1| hypothetical protein GOBAR_AA12923 [Gossypium bar...   459   e-155
ref|XP_021278566.1| pentatricopeptide repeat-containing protein ...   456   e-154
gb|EEF41913.1| pentatricopeptide repeat-containing protein, puta...   447   e-154

>gb|PIN05284.1| hypothetical protein CDL12_22173 [Handroanthus impetiginosus]
          Length = 657

 Score =  524 bits (1350), Expect = 0.0
 Identities = 256/307 (83%), Positives = 284/307 (92%)
 Frame = -2

Query: 922 STSNKNPSIQSLCKKGQLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHRHLI 743
           ST+NKN  IQSLCKKGQLK+AI+LL HE+NP QHT+ELLI+SCA  K+LSDAFTVHR+LI
Sbjct: 45  STTNKNSLIQSLCKKGQLKRAIHLLPHEQNPTQHTFELLIQSCAHHKSLSDAFTVHRNLI 104

Query: 742 DNGFDEDPFLATKLIDMYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEEVLS 563
           DNGF EDPFLATKLI+MY ELDSIQHAR+VFDEIT++T+YVWNAI R+LSL GYGEE LS
Sbjct: 105 DNGFAEDPFLATKLINMYCELDSIQHARQVFDEITHRTVYVWNAILRALSLLGYGEEALS 164

Query: 562 LYRKMNRIGMPSDRFTYTYALKACVVSESRISLLCHGKEIHAHILRHGYEGHVHVMTTLV 383
           LY++MNRIGM SDRFTYTYALKACVVSES    L  GKEIHAH+LRHGYE HVH+MTTLV
Sbjct: 165 LYKRMNRIGMRSDRFTYTYALKACVVSESVPFSLWRGKEIHAHVLRHGYESHVHIMTTLV 224

Query: 382 DMYAKFGCVENASFVFSSMPVKNLVSWSAMIACFSKNGRPFEALELFREMMLESGDMLPN 203
           DMYAKFGCV+NA+ VFSSMPVKNLVSWSAMIACF+KNGRPFEALELFREMML+SGDMLPN
Sbjct: 225 DMYAKFGCVKNANLVFSSMPVKNLVSWSAMIACFAKNGRPFEALELFREMMLDSGDMLPN 284

Query: 202 SVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNVFN 23
           SVTMVSVLQACAA+SALEQGKLIH YILR GLD+ILPVMSAL+TMYARCG+LDLG NVFN
Sbjct: 285 SVTMVSVLQACAALSALEQGKLIHAYILRKGLDSILPVMSALITMYARCGELDLGENVFN 344

Query: 22  QMEKRDI 2
           QM+K+DI
Sbjct: 345 QMDKKDI 351



 Score =  118 bits (295), Expect = 7e-26
 Identities = 68/235 (28%), Positives = 132/235 (56%), Gaps = 6/235 (2%)
 Frame = -2

Query: 820 TYELLIRSCAQQKNLSDAF----TVHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKV 653
           TY   +++C   +++  +      +H H++ +G++    + T L+DMY++   +++A  V
Sbjct: 180 TYTYALKACVVSESVPFSLWRGKEIHAHVLRHGYESHVHIMTTLVDMYAKFGCVKNANLV 239

Query: 652 FDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKM--NRIGMPSDRFTYTYALKACVVSE 479
           F  +  K +  W+A+    + +G   E L L+R+M  +   M  +  T    L+AC    
Sbjct: 240 FSSMPVKNLVSWSAMIACFAKNGRPFEALELFREMMLDSGDMLPNSVTMVSVLQACAA-- 297

Query: 478 SRISLLCHGKEIHAHILRHGYEGHVHVMTTLVDMYAKFGCVENASFVFSSMPVKNLVSWS 299
             +S L  GK IHA+ILR G +  + VM+ L+ MYA+ G ++    VF+ M  K++VSW+
Sbjct: 298 --LSALEQGKLIHAYILRKGLDSILPVMSALITMYARCGELDLGENVFNQMDKKDIVSWN 355

Query: 298 AMIACFSKNGRPFEALELFREMMLESGDMLPNSVTMVSVLQACAAVSALEQGKLI 134
           ++I+ +  +G   +AL +F+EM+     + P+ ++ +SVL AC+    +++GK++
Sbjct: 356 SLISSYGIHGLGTKALTVFQEMV--QLGISPSPISFISVLGACSHSGLVDEGKIL 408



 Score = 58.9 bits (141), Expect = 6e-06
 Identities = 36/170 (21%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
 Frame = -2

Query: 832 PIQHTYELLIRSCAQQKNLSDAFTVHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKV 653
           P   T   ++++CA    L     +H +++  G D    + + LI MY+    +     V
Sbjct: 283 PNSVTMVSVLQACAALSALEQGKLIHAYILRKGLDSILPVMSALITMYARCGELDLGENV 342

Query: 652 FDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKMNRIGMPSDRFTYTYALKACVVSESR 473
           F+++  K I  WN++  S  + G G + L+++++M ++G+     ++   L AC    S 
Sbjct: 343 FNQMDKKDIVSWNSLISSYGIHGLGTKALTVFQEMVQLGISPSPISFISVLGAC----SH 398

Query: 472 ISLLCHGKEI-HAHILRHGYEGHVHVMTTLVDMYAKFGCVENASFVFSSM 326
             L+  GK +  + + +H           +VD+  +   ++ A+ + + M
Sbjct: 399 SGLVDEGKILFDSMVKKHRIRPSTEHYACMVDLLGRANRLDEAAKLIADM 448


>ref|XP_011080694.1| pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Sesamum indicum]
          Length = 657

 Score =  520 bits (1340), Expect = e-179
 Identities = 252/310 (81%), Positives = 286/310 (92%)
 Frame = -2

Query: 931 VRKSTSNKNPSIQSLCKKGQLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHR 752
           +   T+NKN SIQSLC+KGQLKQAI+LL+HE+NP Q+TYELL++SC ++K+L+DA TVHR
Sbjct: 42  ISSPTTNKNHSIQSLCRKGQLKQAIHLLSHEQNPTQYTYELLLQSCVREKSLADALTVHR 101

Query: 751 HLIDNGFDEDPFLATKLIDMYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEE 572
            LIDNGFD+DPFLATKLI +YSELDSI+HAR+VFD+ T++TIYVWNAIFR+LSLSG GEE
Sbjct: 102 SLIDNGFDQDPFLATKLITLYSELDSIEHARQVFDKTTHRTIYVWNAIFRALSLSGLGEE 161

Query: 571 VLSLYRKMNRIGMPSDRFTYTYALKACVVSESRISLLCHGKEIHAHILRHGYEGHVHVMT 392
           VL+LYR+MNRIGM SDRFTYTY LKACVVS+S +S L  GKEIHAH+LRHGYE  VH+MT
Sbjct: 162 VLNLYRRMNRIGMRSDRFTYTYVLKACVVSDSGLSSLWAGKEIHAHVLRHGYESQVHIMT 221

Query: 391 TLVDMYAKFGCVENASFVFSSMPVKNLVSWSAMIACFSKNGRPFEALELFREMMLESGDM 212
           TLVDMYAKFGCVENA+ VFSSMPVKNLVSWSA+IACF+KN RPFEAL LFREMMLESGDM
Sbjct: 222 TLVDMYAKFGCVENANLVFSSMPVKNLVSWSALIACFAKNDRPFEALRLFREMMLESGDM 281

Query: 211 LPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRN 32
           LPNSVTMVSVLQACAAVSAL+QGKLIHGYILR GLD+ILPVMS LVTMYARCGDLDLG+N
Sbjct: 282 LPNSVTMVSVLQACAAVSALDQGKLIHGYILRKGLDSILPVMSTLVTMYARCGDLDLGKN 341

Query: 31  VFNQMEKRDI 2
           VFNQM+KRDI
Sbjct: 342 VFNQMDKRDI 351



 Score =  117 bits (294), Expect = 1e-25
 Identities = 70/235 (29%), Positives = 130/235 (55%), Gaps = 6/235 (2%)
 Frame = -2

Query: 820 TYELLIRSCA-QQKNLSDAFT---VHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKV 653
           TY  ++++C      LS  +    +H H++ +G++    + T L+DMY++   +++A  V
Sbjct: 180 TYTYVLKACVVSDSGLSSLWAGKEIHAHVLRHGYESQVHIMTTLVDMYAKFGCVENANLV 239

Query: 652 FDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKM--NRIGMPSDRFTYTYALKACVVSE 479
           F  +  K +  W+A+    + +    E L L+R+M      M  +  T    L+AC    
Sbjct: 240 FSSMPVKNLVSWSALIACFAKNDRPFEALRLFREMMLESGDMLPNSVTMVSVLQACAA-- 297

Query: 478 SRISLLCHGKEIHAHILRHGYEGHVHVMTTLVDMYAKFGCVENASFVFSSMPVKNLVSWS 299
             +S L  GK IH +ILR G +  + VM+TLV MYA+ G ++    VF+ M  +++VSW+
Sbjct: 298 --VSALDQGKLIHGYILRKGLDSILPVMSTLVTMYARCGDLDLGKNVFNQMDKRDIVSWN 355

Query: 298 AMIACFSKNGRPFEALELFREMMLESGDMLPNSVTMVSVLQACAAVSALEQGKLI 134
           ++I+ +  +G   +AL +F+EM+     + P+ ++ VSVL AC+    +++GK++
Sbjct: 356 SLISSYGIHGLGSKALAVFQEMV--QLGISPSPISFVSVLGACSHSGLVDEGKIL 408


>ref|XP_012836785.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Erythranthe guttata]
          Length = 654

 Score =  516 bits (1330), Expect = e-178
 Identities = 254/308 (82%), Positives = 286/308 (92%), Gaps = 1/308 (0%)
 Frame = -2

Query: 922 STSNKNPSIQSLCKKGQLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHRHLI 743
           S +  N SIQSLCKKGQLKQAI+LL+ E+NP Q TYELLI+SCA QK+LSDAF+VHR+L+
Sbjct: 41  SVAKINHSIQSLCKKGQLKQAIHLLSQEQNPTQQTYELLIQSCAHQKSLSDAFSVHRNLV 100

Query: 742 DNGFDEDPFLATKLIDMYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEEVLS 563
           DNGFD+DPFLATKLI+MY+ELDSI++AR+VFDEIT++TIYVWNAI R+LSLSGYGEE LS
Sbjct: 101 DNGFDQDPFLATKLINMYTELDSIEYARQVFDEITHRTIYVWNAILRALSLSGYGEEALS 160

Query: 562 LYRKMNRIGMPSDRFTYTYALKACVVSESRISLLCHGKEIHAHILRHGYEGHVHVMTTLV 383
           LYR+MN+ GMPSDRF+YTYALKACVVSES+ S    GKEIHAH+LRHGYE HVH+MTTLV
Sbjct: 161 LYRRMNQTGMPSDRFSYTYALKACVVSESKFSSDWRGKEIHAHVLRHGYESHVHIMTTLV 220

Query: 382 DMYAKFGCVENASFVFSSMPVKNLVSWSAMIACFSKNGRPFEALELFREMMLES-GDMLP 206
           DMYAKFG VENA+ VFSSMP KNLVSWSAMIACF+KNGRPFEALELFREMMLES GD+LP
Sbjct: 221 DMYAKFGSVENANCVFSSMPAKNLVSWSAMIACFAKNGRPFEALELFREMMLESGGDLLP 280

Query: 205 NSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNVF 26
           NSVTMV+VLQACAAVSALEQGKLIHGYILR GLD+ILPVMSALVTMYARCGDL+LG+NVF
Sbjct: 281 NSVTMVAVLQACAAVSALEQGKLIHGYILRKGLDSILPVMSALVTMYARCGDLELGKNVF 340

Query: 25  NQMEKRDI 2
           NQMEKRD+
Sbjct: 341 NQMEKRDV 348



 Score =  127 bits (320), Expect = 3e-29
 Identities = 78/263 (29%), Positives = 145/263 (55%), Gaps = 3/263 (1%)
 Frame = -2

Query: 823 HTYELLIRSCAQQKNLSD--AFTVHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKVF 650
           +TY L     ++ K  SD     +H H++ +G++    + T L+DMY++  S+++A  VF
Sbjct: 177 YTYALKACVVSESKFSSDWRGKEIHAHVLRHGYESHVHIMTTLVDMYAKFGSVENANCVF 236

Query: 649 DEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKMNRIGMPSDRFTYTYALKACVVSESRI 470
             +  K +  W+A+    + +G   E L L+R+M  +    D    +  + A + + + +
Sbjct: 237 SSMPAKNLVSWSAMIACFAKNGRPFEALELFREM-MLESGGDLLPNSVTMVAVLQACAAV 295

Query: 469 SLLCHGKEIHAHILRHGYEGHVHVMTTLVDMYAKFGCVENASFVFSSMPVKNLVSWSAMI 290
           S L  GK IH +ILR G +  + VM+ LV MYA+ G +E    VF+ M  ++++SW+++I
Sbjct: 296 SALEQGKLIHGYILRKGLDSILPVMSALVTMYARCGDLELGKNVFNQMEKRDVISWNSLI 355

Query: 289 ACFSKNGRPFEALELFREMMLESGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYIL-RN 113
           + ++ +G   EAL +FREM+     + P+ ++ VSVL AC+    +++GK++   +L R 
Sbjct: 356 SSYAIHGLGSEALSVFREMV--QLGLSPSPISFVSVLGACSHSGLVDEGKMLFDSLLKRY 413

Query: 112 GLDNILPVMSALVTMYARCGDLD 44
           G+   +   + +V +  R   LD
Sbjct: 414 GIQPTVEHYACMVDLLGRANRLD 436



 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 38/170 (22%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
 Frame = -2

Query: 832 PIQHTYELLIRSCAQQKNLSDAFTVHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKV 653
           P   T   ++++CA    L     +H +++  G D    + + L+ MY+    ++  + V
Sbjct: 280 PNSVTMVAVLQACAAVSALEQGKLIHGYILRKGLDSILPVMSALVTMYARCGDLELGKNV 339

Query: 652 FDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKMNRIGMPSDRFTYTYALKACVVSESR 473
           F+++  + +  WN++  S ++ G G E LS++R+M ++G+     ++   L AC    S 
Sbjct: 340 FNQMEKRDVISWNSLISSYAIHGLGSEALSVFREMVQLGLSPSPISFVSVLGAC----SH 395

Query: 472 ISLLCHGKEIHAHIL-RHGYEGHVHVMTTLVDMYAKFGCVENASFVFSSM 326
             L+  GK +   +L R+G +  V     +VD+  +   ++ A+ + + +
Sbjct: 396 SGLVDEGKMLFDSLLKRYGIQPTVEHYACMVDLLGRANRLDEAAKIIADL 445


>ref|XP_022874887.1| pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Olea europaea var. sylvestris]
          Length = 664

 Score =  500 bits (1288), Expect = e-171
 Identities = 242/307 (78%), Positives = 279/307 (90%)
 Frame = -2

Query: 922 STSNKNPSIQSLCKKGQLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHRHLI 743
           S +N N  IQSLCKKGQLKQA+ LL+HE NP QHTYELLI +C  Q +LSDAF V R LI
Sbjct: 52  SVTNNNHLIQSLCKKGQLKQALNLLSHEPNPTQHTYELLILACTHQNSLSDAFIVQRDLI 111

Query: 742 DNGFDEDPFLATKLIDMYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEEVLS 563
           +NGFD+DPFLATKLI+M+SELDS++HAR+VFD+I ++TIY+WNA FR+LSLSG GEEVLS
Sbjct: 112 ENGFDQDPFLATKLINMFSELDSVEHARQVFDKINHRTIYIWNAFFRALSLSGRGEEVLS 171

Query: 562 LYRKMNRIGMPSDRFTYTYALKACVVSESRISLLCHGKEIHAHILRHGYEGHVHVMTTLV 383
           LYR+MNRIG+PSDRFTYTYALK+CVVSES++SLL  GKEIHAHILRHGYE HVH+MTTLV
Sbjct: 172 LYREMNRIGVPSDRFTYTYALKSCVVSESQLSLLWRGKEIHAHILRHGYEKHVHIMTTLV 231

Query: 382 DMYAKFGCVENASFVFSSMPVKNLVSWSAMIACFSKNGRPFEALELFREMMLESGDMLPN 203
           DMYAKFGCVENAS VF +MPVKN+VSWSAMIAC++KNGRP EALE+FREMMLES DMLPN
Sbjct: 232 DMYAKFGCVENASCVFCAMPVKNVVSWSAMIACYAKNGRPLEALEVFREMMLESEDMLPN 291

Query: 202 SVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNVFN 23
           SVTMVSVLQACAA++ALEQGKLIHGYILR GLD+ILPV+SAL+TMYARCGDL+LG+ VF 
Sbjct: 292 SVTMVSVLQACAAIAALEQGKLIHGYILRKGLDSILPVISALMTMYARCGDLELGKRVFF 351

Query: 22  QMEKRDI 2
            M+KRD+
Sbjct: 352 LMDKRDV 358



 Score =  122 bits (307), Expect = 2e-27
 Identities = 79/276 (28%), Positives = 147/276 (53%), Gaps = 7/276 (2%)
 Frame = -2

Query: 820 TYELLIRSC----AQQKNLSDAFTVHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKV 653
           TY   ++SC    +Q   L     +H H++ +G+++   + T L+DMY++   +++A  V
Sbjct: 187 TYTYALKSCVVSESQLSLLWRGKEIHAHILRHGYEKHVHIMTTLVDMYAKFGCVENASCV 246

Query: 652 FDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKM--NRIGMPSDRFTYTYALKACVVSE 479
           F  +  K +  W+A+    + +G   E L ++R+M      M  +  T    L+AC    
Sbjct: 247 FCAMPVKNVVSWSAMIACYAKNGRPLEALEVFREMMLESEDMLPNSVTMVSVLQACAA-- 304

Query: 478 SRISLLCHGKEIHAHILRHGYEGHVHVMTTLVDMYAKFGCVENASFVFSSMPVKNLVSWS 299
             I+ L  GK IH +ILR G +  + V++ L+ MYA+ G +E    VF  M  ++++SW+
Sbjct: 305 --IAALEQGKLIHGYILRKGLDSILPVISALMTMYARCGDLELGKRVFFLMDKRDVISWN 362

Query: 298 AMIACFSKNGRPFEALELFREMMLESGDMLPNSVTMVSVLQACAAVSALEQGK-LIHGYI 122
           +MI+ ++ +G   +A+E+FREM+     + P+ ++ VSVL AC+    +E+GK L H  +
Sbjct: 363 SMISSYAIHGLGEKAIEVFREMV--RCGVSPSPISFVSVLGACSHSGLVEEGKYLFHSMV 420

Query: 121 LRNGLDNILPVMSALVTMYARCGDLDLGRNVFNQME 14
             +G+   +   + +V +  R   L+   N+   M+
Sbjct: 421 KEHGVYPRVEHYACMVDLLGRANLLEEAANIIEDMQ 456



 Score = 67.8 bits (164), Expect = 8e-09
 Identities = 39/173 (22%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
 Frame = -2

Query: 832 PIQHTYELLIRSCAQQKNLSDAFTVHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKV 653
           P   T   ++++CA    L     +H +++  G D    + + L+ MY+    ++  ++V
Sbjct: 290 PNSVTMVSVLQACAAIAALEQGKLIHGYILRKGLDSILPVISALMTMYARCGDLELGKRV 349

Query: 652 FDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKMNRIGMPSDRFTYTYALKACVVSESR 473
           F  +  + +  WN++  S ++ G GE+ + ++R+M R G+     ++   L AC    S 
Sbjct: 350 FFLMDKRDVISWNSMISSYAIHGLGEKAIEVFREMVRCGVSPSPISFVSVLGAC----SH 405

Query: 472 ISLLCHGKEI-HAHILRHGYEGHVHVMTTLVDMYAKFGCVENASFVFSSMPVK 317
             L+  GK + H+ +  HG    V     +VD+  +   +E A+ +   M ++
Sbjct: 406 SGLVEEGKYLFHSMVKEHGVYPRVEHYACMVDLLGRANLLEEAANIIEDMQIE 458


>gb|KZV54221.1| chlororespiratory reduction 2 family protein [Dorcoceras
           hygrometricum]
          Length = 653

 Score =  490 bits (1262), Expect = e-168
 Identities = 241/307 (78%), Positives = 277/307 (90%)
 Frame = -2

Query: 922 STSNKNPSIQSLCKKGQLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHRHLI 743
           ST+ +N SIQ LCKKGQLKQAI LL+ E+NP QHTYE+LI SCA +K+LSDAFTVH++L 
Sbjct: 44  STTGQNQSIQYLCKKGQLKQAIQLLSIEQNPTQHTYEILILSCALEKSLSDAFTVHKNLT 103

Query: 742 DNGFDEDPFLATKLIDMYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEEVLS 563
           +NGFD+DPFLATKLI+MYSEL+S++HA +VFDEI+N+TIYVWNA+ R+LSLSGYGE+VL 
Sbjct: 104 ENGFDQDPFLATKLINMYSELNSVEHACQVFDEISNRTIYVWNALLRALSLSGYGEKVLR 163

Query: 562 LYRKMNRIGMPSDRFTYTYALKACVVSESRISLLCHGKEIHAHILRHGYEGHVHVMTTLV 383
           LYRKMNRIG+ SDRFTYTYALKACVVSES +S    GKEIHAHILRHGYE  VH+MTTLV
Sbjct: 164 LYRKMNRIGIRSDRFTYTYALKACVVSESSVS---RGKEIHAHILRHGYESSVHIMTTLV 220

Query: 382 DMYAKFGCVENASFVFSSMPVKNLVSWSAMIACFSKNGRPFEALELFREMMLESGDMLPN 203
           DMYAK+GC ENA+ VF SMPVKN+VSWSAMIACF+KNGR FEALE+FREMMLES DMLPN
Sbjct: 221 DMYAKYGCGENANCVFCSMPVKNIVSWSAMIACFAKNGRAFEALEIFREMMLESEDMLPN 280

Query: 202 SVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNVFN 23
           SVTMVSVLQACAA++ALE GKLIH YILR GLD+ILPVMSALVTMYARCGDLDL ++VFN
Sbjct: 281 SVTMVSVLQACAALAALEHGKLIHAYILRKGLDSILPVMSALVTMYARCGDLDLAKHVFN 340

Query: 22  QMEKRDI 2
           QM +RD+
Sbjct: 341 QMSRRDV 347



 Score =  125 bits (315), Expect = 2e-28
 Identities = 77/263 (29%), Positives = 142/263 (53%), Gaps = 4/263 (1%)
 Frame = -2

Query: 820 TYELLIRSCA-QQKNLSDAFTVHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKVFDE 644
           TY   +++C   + ++S    +H H++ +G++    + T L+DMY++    ++A  VF  
Sbjct: 179 TYTYALKACVVSESSVSRGKEIHAHILRHGYESSVHIMTTLVDMYAKYGCGENANCVFCS 238

Query: 643 ITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKM--NRIGMPSDRFTYTYALKACVVSESRI 470
           +  K I  W+A+    + +G   E L ++R+M      M  +  T    L+AC      +
Sbjct: 239 MPVKNIVSWSAMIACFAKNGRAFEALEIFREMMLESEDMLPNSVTMVSVLQACAA----L 294

Query: 469 SLLCHGKEIHAHILRHGYEGHVHVMTTLVDMYAKFGCVENASFVFSSMPVKNLVSWSAMI 290
           + L HGK IHA+ILR G +  + VM+ LV MYA+ G ++ A  VF+ M  +++V+W++MI
Sbjct: 295 AALEHGKLIHAYILRKGLDSILPVMSALVTMYARCGDLDLAKHVFNQMSRRDVVAWNSMI 354

Query: 289 ACFSKNGRPFEALELFREMMLESGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYILRN- 113
           + +  +G   EA  +F EM++    + P  ++ VSVL AC+    +++GK +   ++R  
Sbjct: 355 SSYGIHGFGSEARNVFHEMVMLG--VSPTPISFVSVLGACSHSGLVDEGKSLFDSMVREY 412

Query: 112 GLDNILPVMSALVTMYARCGDLD 44
           G+D  +   + +V +  R    D
Sbjct: 413 GIDPTVEHYACMVDLLGRANRFD 435



 Score = 62.4 bits (150), Expect = 5e-07
 Identities = 35/170 (20%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
 Frame = -2

Query: 832 PIQHTYELLIRSCAQQKNLSDAFTVHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKV 653
           P   T   ++++CA    L     +H +++  G D    + + L+ MY+    +  A+ V
Sbjct: 279 PNSVTMVSVLQACAALAALEHGKLIHAYILRKGLDSILPVMSALVTMYARCGDLDLAKHV 338

Query: 652 FDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKMNRIGMPSDRFTYTYALKACVVSESR 473
           F++++ + +  WN++  S  + G+G E  +++ +M  +G+     ++   L AC    S 
Sbjct: 339 FNQMSRRDVVAWNSMISSYGIHGFGSEARNVFHEMVMLGVSPTPISFVSVLGAC----SH 394

Query: 472 ISLLCHGKEIHAHILR-HGYEGHVHVMTTLVDMYAKFGCVENASFVFSSM 326
             L+  GK +   ++R +G +  V     +VD+  +    + A+ +  ++
Sbjct: 395 SGLVDEGKSLFDSMVREYGIDPTVEHYACMVDLLGRANRFDEATKIIENI 444


>ref|XP_018855574.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Juglans regia]
          Length = 653

 Score =  470 bits (1210), Expect = e-160
 Identities = 227/309 (73%), Positives = 268/309 (86%)
 Frame = -2

Query: 928 RKSTSNKNPSIQSLCKKGQLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHRH 749
           + + +N N  IQSLCK+G LKQA+ +L HE NP QHTYELLI SC+ Q +LSD   VHRH
Sbjct: 39  KNTGTNYNQLIQSLCKQGSLKQALQVLPHEPNPTQHTYELLILSCSLQNSLSDGVDVHRH 98

Query: 748 LIDNGFDEDPFLATKLIDMYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEEV 569
           L+D GFD+DPFLATKLI+MYSELDSI  AR+VFD+   +TIYVWNA+FR+L+L+GYG+EV
Sbjct: 99  LLDAGFDQDPFLATKLINMYSELDSIDDAREVFDKTRKRTIYVWNALFRALTLAGYGQEV 158

Query: 568 LSLYRKMNRIGMPSDRFTYTYALKACVVSESRISLLCHGKEIHAHILRHGYEGHVHVMTT 389
           L LYR+MN IG+PSDRFTYTY LKACV SE  ISLL  GKEIHAHILRHGYE HVHVMTT
Sbjct: 159 LGLYRRMNEIGIPSDRFTYTYVLKACVASECLISLLHMGKEIHAHILRHGYESHVHVMTT 218

Query: 388 LVDMYAKFGCVENASFVFSSMPVKNLVSWSAMIACFSKNGRPFEALELFREMMLESGDML 209
           +VDMYA+FGCV NAS VF SMPV+N+VSWSAMIAC++KNG PFEALELFREM+LE+ D +
Sbjct: 219 MVDMYARFGCVSNASCVFDSMPVRNVVSWSAMIACYAKNGSPFEALELFREMILETHDSV 278

Query: 208 PNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNV 29
           PNSVTMVSVLQAC+A+++LEQGKLIHGYILR GLD+ILPV+SALVTMYARCG L+LG+ V
Sbjct: 279 PNSVTMVSVLQACSALASLEQGKLIHGYILRRGLDSILPVISALVTMYARCGKLELGQLV 338

Query: 28  FNQMEKRDI 2
           F++M KRD+
Sbjct: 339 FDRMAKRDV 347



 Score =  118 bits (296), Expect = 5e-26
 Identities = 74/278 (26%), Positives = 145/278 (52%), Gaps = 10/278 (3%)
 Frame = -2

Query: 820 TYELLIRSCAQQKNLSDAF----TVHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKV 653
           TY  ++++C   + L         +H H++ +G++    + T ++DMY+    + +A  V
Sbjct: 176 TYTYVLKACVASECLISLLHMGKEIHAHILRHGYESHVHVMTTMVDMYARFGCVSNASCV 235

Query: 652 FDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKM---NRIGMPSDRFTYTYALKACVVS 482
           FD +  + +  W+A+    + +G   E L L+R+M       +P+   T    L+AC   
Sbjct: 236 FDSMPVRNVVSWSAMIACYAKNGSPFEALELFREMILETHDSVPNS-VTMVSVLQAC--- 291

Query: 481 ESRISLLCHGKEIHAHILRHGYEGHVHVMTTLVDMYAKFGCVENASFVFSSMPVKNLVSW 302
            S ++ L  GK IH +ILR G +  + V++ LV MYA+ G +E    VF  M  +++VSW
Sbjct: 292 -SALASLEQGKLIHGYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMAKRDVVSW 350

Query: 301 SAMIACFSKNGRPFEALELFREMMLESGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYI 122
           +++I+ +  +G   +++++F EM+ +   + P+ ++ VSVL AC+    +E+GK++   +
Sbjct: 351 NSLISSYGIHGFGKKSIQIFLEMIQQG--LSPSHISFVSVLGACSHAGFVEEGKMLFESM 408

Query: 121 LRNGLDNILPVM---SALVTMYARCGDLDLGRNVFNQM 17
           ++     I P +   + +V +  R   LD    +   M
Sbjct: 409 VKE--HRIYPSVEHYACMVDLLGRANQLDEAAKIIEDM 444



 Score = 64.3 bits (155), Expect = 1e-07
 Identities = 36/187 (19%), Positives = 88/187 (47%), Gaps = 1/187 (0%)
 Frame = -2

Query: 874 QLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHRHLIDNGFDEDPFLATKLID 695
           +L + + L TH+  P   T   ++++C+   +L     +H +++  G D    + + L+ 
Sbjct: 265 ELFREMILETHDSVPNSVTMVSVLQACSALASLEQGKLIHGYILRRGLDSILPVISALVT 324

Query: 694 MYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKMNRIGMPSDRFT 515
           MY+    ++  + VFD +  + +  WN++  S  + G+G++ + ++ +M + G+     +
Sbjct: 325 MYARCGKLELGQLVFDRMAKRDVVSWNSLISSYGIHGFGKKSIQIFLEMIQQGLSPSHIS 384

Query: 514 YTYALKACVVSESRISLLCHGKEIHAHILR-HGYEGHVHVMTTLVDMYAKFGCVENASFV 338
           +   L AC    S    +  GK +   +++ H     V     +VD+  +   ++ A+ +
Sbjct: 385 FVSVLGAC----SHAGFVEEGKMLFESMVKEHRIYPSVEHYACMVDLLGRANQLDEAAKI 440

Query: 337 FSSMPVK 317
              M ++
Sbjct: 441 IEDMRIE 447


>ref|XP_011032227.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Populus euphratica]
          Length = 647

 Score =  468 bits (1205), Expect = e-159
 Identities = 225/306 (73%), Positives = 269/306 (87%)
 Frame = -2

Query: 919 TSNKNPSIQSLCKKGQLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHRHLID 740
           T++ N  IQSLCK+G L QA+ LL+HE NP QHTYELLI SC  Q +L DA  VHRHL++
Sbjct: 36  TADNNKLIQSLCKQGNLTQALKLLSHEPNPAQHTYELLILSCTHQNSLLDAQRVHRHLLE 95

Query: 739 NGFDEDPFLATKLIDMYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEEVLSL 560
           NGFD+DPFLATKLI+MYS  DSI +ARKVFD+   +TIYV+NA+FR+LSL+G+GEEVL++
Sbjct: 96  NGFDQDPFLATKLINMYSFFDSIDNARKVFDKTQTRTIYVYNALFRALSLAGHGEEVLNM 155

Query: 559 YRKMNRIGMPSDRFTYTYALKACVVSESRISLLCHGKEIHAHILRHGYEGHVHVMTTLVD 380
           YR+MN IG+PSDRFTYTY LKACV SE  +SLL  GKEIHAHILRHGY+G+VH+MTTLVD
Sbjct: 156 YRRMNSIGIPSDRFTYTYVLKACVASECLVSLLNKGKEIHAHILRHGYDGYVHIMTTLVD 215

Query: 379 MYAKFGCVENASFVFSSMPVKNLVSWSAMIACFSKNGRPFEALELFREMMLESGDMLPNS 200
           MYAKFGCV NAS VF+ MPVKN+VSWSAMIAC++KNG+ FEALELFRE+MLE+ D+ PNS
Sbjct: 216 MYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNS 275

Query: 199 VTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNVFNQ 20
           VTMVSVLQACAA++ALEQG+LIHGYILR GLD+ILPV+SALVTMYARCG L+LG+ VF+Q
Sbjct: 276 VTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQ 335

Query: 19  MEKRDI 2
           M+KRD+
Sbjct: 336 MDKRDV 341



 Score =  114 bits (284), Expect = 2e-24
 Identities = 70/275 (25%), Positives = 142/275 (51%), Gaps = 7/275 (2%)
 Frame = -2

Query: 820 TYELLIRSCAQQKNLSDAFT----VHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKV 653
           TY  ++++C   + L         +H H++ +G+D    + T L+DMY++   + +A  V
Sbjct: 170 TYTYVLKACVASECLVSLLNKGKEIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCV 229

Query: 652 FDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKM--NRIGMPSDRFTYTYALKACVVSE 479
           F+++  K +  W+A+    + +G   E L L+R++      +  +  T    L+AC    
Sbjct: 230 FNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAA-- 287

Query: 478 SRISLLCHGKEIHAHILRHGYEGHVHVMTTLVDMYAKFGCVENASFVFSSMPVKNLVSWS 299
             ++ L  G+ IH +ILR G +  + V++ LV MYA+ G +E    VF  M  +++VSW+
Sbjct: 288 --LAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWN 345

Query: 298 AMIACFSKNGRPFEALELFREMMLESGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYI- 122
           ++I+ +  +G   +A+ +F EM     +  P+ ++ VSVL AC+    +++GK++   + 
Sbjct: 346 SLISSYGVHGFGKKAIGIFEEMTYNGVE--PSPISFVSVLGACSHAGLVDEGKMLFKSMH 403

Query: 121 LRNGLDNILPVMSALVTMYARCGDLDLGRNVFNQM 17
           + +G+   +   + +V +  R   L+    +   M
Sbjct: 404 VAHGICPSVEHYACMVDLLGRANRLEEAAKIIENM 438



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 39/187 (20%), Positives = 89/187 (47%), Gaps = 1/187 (0%)
 Frame = -2

Query: 874 QLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHRHLIDNGFDEDPFLATKLID 695
           +L + + L T +  P   T   ++++CA    L     +H +++  G D    + + L+ 
Sbjct: 259 ELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVT 318

Query: 694 MYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKMNRIGMPSDRFT 515
           MY+    ++  ++VFD++  + +  WN++  S  + G+G++ + ++ +M   G+     +
Sbjct: 319 MYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPIS 378

Query: 514 YTYALKACVVSESRISLLCHGKEIHAHI-LRHGYEGHVHVMTTLVDMYAKFGCVENASFV 338
           +   L AC    S   L+  GK +   + + HG    V     +VD+  +   +E A+ +
Sbjct: 379 FVSVLGAC----SHAGLVDEGKMLFKSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKI 434

Query: 337 FSSMPVK 317
             +M ++
Sbjct: 435 IENMRIE 441


>ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 658

 Score =  468 bits (1204), Expect = e-159
 Identities = 222/306 (72%), Positives = 267/306 (87%)
 Frame = -2

Query: 919 TSNKNPSIQSLCKKGQLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHRHLID 740
           ++N NP IQSLCK+G L QA+ +L+ E NP QHTYELLI SC +Q +L     +HRHLI 
Sbjct: 47  SNNNNPLIQSLCKQGNLNQALQVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIH 106

Query: 739 NGFDEDPFLATKLIDMYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEEVLSL 560
           +G D+DPFLATKLI+MYSELDSI +ARKVFD+   +TIYVWNA+FR+L+L+GYG EVL L
Sbjct: 107 DGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDL 166

Query: 559 YRKMNRIGMPSDRFTYTYALKACVVSESRISLLCHGKEIHAHILRHGYEGHVHVMTTLVD 380
           YR+MNRIG+PSDRFTYTY LKACV SE+ +SLL +G+EIH HILRHG+EGHVH+MTTL+D
Sbjct: 167 YRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLD 226

Query: 379 MYAKFGCVENASFVFSSMPVKNLVSWSAMIACFSKNGRPFEALELFREMMLESGDMLPNS 200
           MYA+FGCV NAS VF  MPVKN+VSWSAMIAC+SKNG+P EALELFR+MMLE+ D+LPNS
Sbjct: 227 MYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNS 286

Query: 199 VTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNVFNQ 20
           VTMVSVLQACAA++ALEQGKL+HGYILR GLD+ILPV+SALVT+YARCG+L+LG  VF +
Sbjct: 287 VTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFER 346

Query: 19  MEKRDI 2
           MEKRD+
Sbjct: 347 MEKRDV 352



 Score =  124 bits (312), Expect = 4e-28
 Identities = 79/278 (28%), Positives = 151/278 (54%), Gaps = 10/278 (3%)
 Frame = -2

Query: 820 TYELLIRSCAQQKN----LSDAFTVHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKV 653
           TY  ++++C   +     L +   +H H++ +GF+    + T L+DMY+    + +A +V
Sbjct: 181 TYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRV 240

Query: 652 FDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKM---NRIGMPSDRFTYTYALKACVVS 482
           FD++  K +  W+A+    S +G   E L L+RKM   N+  +P+   T    L+AC   
Sbjct: 241 FDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNS-VTMVSVLQACAA- 298

Query: 481 ESRISLLCHGKEIHAHILRHGYEGHVHVMTTLVDMYAKFGCVENASFVFSSMPVKNLVSW 302
              ++ L  GK +H +ILR G +  + V++ LV +YA+ G +E    VF  M  +++VSW
Sbjct: 299 ---LAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSW 355

Query: 301 SAMIACFSKNGRPFEALELFREMMLESGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYI 122
           +++I+ +  +G   +A+++F+EM+ +   + P+ ++ VSVL AC+    +E+GK++   +
Sbjct: 356 NSLISSYGIHGFGRKAIQIFKEMIDQG--LSPSPISFVSVLGACSHAGLVEEGKVLFESM 413

Query: 121 LRNGLDNILPVM---SALVTMYARCGDLDLGRNVFNQM 17
           +R     I P +   + +V +  R   LD    + + M
Sbjct: 414 VRG--HKIFPSVEHYACMVDLLGRANRLDEAAKIIDDM 449


>ref|XP_002313416.2| chlororespiratory reduction 2 family protein [Populus trichocarpa]
 gb|PNT19416.1| hypothetical protein POPTR_009G037600v3 [Populus trichocarpa]
          Length = 650

 Score =  466 bits (1200), Expect = e-158
 Identities = 225/307 (73%), Positives = 270/307 (87%)
 Frame = -2

Query: 922 STSNKNPSIQSLCKKGQLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHRHLI 743
           ST++ N  IQSLCK+G L QA+ LL+ E NP QHTYELLI SC  Q +L DA  VHRHL+
Sbjct: 38  STADNNKLIQSLCKQGNLTQALELLSLEPNPAQHTYELLILSCTHQNSLLDAQRVHRHLL 97

Query: 742 DNGFDEDPFLATKLIDMYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEEVLS 563
           +NGFD+DPFLATKLI+MYS  DSI +ARKVFD+  N+TIYV+NA+FR+LSL+G+GEEVL+
Sbjct: 98  ENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLN 157

Query: 562 LYRKMNRIGMPSDRFTYTYALKACVVSESRISLLCHGKEIHAHILRHGYEGHVHVMTTLV 383
           +YR+MN IG+PSDRFTYTY LKACV SE  +SLL  G+EIHAHILRHGY+G+VH+MTTLV
Sbjct: 158 MYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLV 217

Query: 382 DMYAKFGCVENASFVFSSMPVKNLVSWSAMIACFSKNGRPFEALELFREMMLESGDMLPN 203
           DMYAKFGCV NAS VF+ MPVKN+VSWSAMIAC++KNG+ FEALELFRE+MLE+ D+ PN
Sbjct: 218 DMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPN 277

Query: 202 SVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNVFN 23
           SVTMVSVLQACAA++ALEQG+LIHGYILR GLD+ILPV+SALVTMYARCG L+LG+ VF+
Sbjct: 278 SVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFD 337

Query: 22  QMEKRDI 2
           QM+KRD+
Sbjct: 338 QMDKRDV 344



 Score =  114 bits (286), Expect = 1e-24
 Identities = 71/275 (25%), Positives = 143/275 (52%), Gaps = 7/275 (2%)
 Frame = -2

Query: 820 TYELLIRSCAQQKN----LSDAFTVHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKV 653
           TY  ++++C   +     L+    +H H++ +G+D    + T L+DMY++   + +A  V
Sbjct: 173 TYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCV 232

Query: 652 FDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKM--NRIGMPSDRFTYTYALKACVVSE 479
           F+++  K +  W+A+    + +G   E L L+R++      +  +  T    L+AC    
Sbjct: 233 FNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAA-- 290

Query: 478 SRISLLCHGKEIHAHILRHGYEGHVHVMTTLVDMYAKFGCVENASFVFSSMPVKNLVSWS 299
             ++ L  G+ IH +ILR G +  + V++ LV MYA+ G +E    VF  M  +++VSW+
Sbjct: 291 --LAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWN 348

Query: 298 AMIACFSKNGRPFEALELFREMMLESGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYI- 122
           ++I+ +  +G   +A+ +F EM     +  P+ V+ VSVL AC+    +++GK++   + 
Sbjct: 349 SLISSYGVHGFGKKAIGIFEEMTYNGVE--PSPVSFVSVLGACSHAGLVDEGKMLFSSMH 406

Query: 121 LRNGLDNILPVMSALVTMYARCGDLDLGRNVFNQM 17
           + +G+   +   + +V +  R   L+    +   M
Sbjct: 407 VAHGICPSVEHYACMVDLLGRANRLEEAAKIIENM 441



 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 39/187 (20%), Positives = 90/187 (48%), Gaps = 1/187 (0%)
 Frame = -2

Query: 874 QLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHRHLIDNGFDEDPFLATKLID 695
           +L + + L T +  P   T   ++++CA    L     +H +++  G D    + + L+ 
Sbjct: 262 ELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVT 321

Query: 694 MYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKMNRIGMPSDRFT 515
           MY+    ++  ++VFD++  + +  WN++  S  + G+G++ + ++ +M   G+     +
Sbjct: 322 MYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPVS 381

Query: 514 YTYALKACVVSESRISLLCHGKEIHAHI-LRHGYEGHVHVMTTLVDMYAKFGCVENASFV 338
           +   L AC    S   L+  GK + + + + HG    V     +VD+  +   +E A+ +
Sbjct: 382 FVSVLGAC----SHAGLVDEGKMLFSSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKI 437

Query: 337 FSSMPVK 317
             +M ++
Sbjct: 438 IENMRIE 444


>ref|XP_023910915.1| pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Quercus suber]
          Length = 655

 Score =  466 bits (1199), Expect = e-158
 Identities = 225/308 (73%), Positives = 267/308 (86%)
 Frame = -2

Query: 925 KSTSNKNPSIQSLCKKGQLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHRHL 746
           K  +N N  IQSLCK+G LKQA+ +L+HE NP QHTYE LI SC++Q +LSD   VHRHL
Sbjct: 42  KPETNCNHLIQSLCKQGSLKQALEVLSHEPNPTQHTYEALILSCSRQSSLSDGLDVHRHL 101

Query: 745 IDNGFDEDPFLATKLIDMYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEEVL 566
           +D GFD+DPFLATKLI+MYSELD+I +ARKVFDE   +TIYVWNA+FR+L+L+G+G+EVL
Sbjct: 102 VDAGFDQDPFLATKLINMYSELDAIDNARKVFDETRKRTIYVWNALFRALTLAGHGQEVL 161

Query: 565 SLYRKMNRIGMPSDRFTYTYALKACVVSESRISLLCHGKEIHAHILRHGYEGHVHVMTTL 386
            LYR+MN+IG+PSDRFTYTY LKACV SES ISLL  GKE+HAHILRHGYE  VH+ TTL
Sbjct: 162 DLYRRMNQIGIPSDRFTYTYVLKACVASESLISLLLTGKEVHAHILRHGYESLVHITTTL 221

Query: 385 VDMYAKFGCVENASFVFSSMPVKNLVSWSAMIACFSKNGRPFEALELFREMMLESGDMLP 206
           VDMYA+FG V  AS+VF  MPV+N+VSWSAMIAC+ KNGR FEALELFREM+LE+ D +P
Sbjct: 222 VDMYARFGSVSYASYVFDEMPVRNVVSWSAMIACYVKNGRAFEALELFREMILETQDSIP 281

Query: 205 NSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNVF 26
           NSVTMVSVLQACAA++ALEQGKLIHGYILR GLD+ILPV+SAL+TMYARCG L+LG+ VF
Sbjct: 282 NSVTMVSVLQACAALAALEQGKLIHGYILRRGLDSILPVISALLTMYARCGKLELGQRVF 341

Query: 25  NQMEKRDI 2
           +QMEKRD+
Sbjct: 342 DQMEKRDV 349



 Score =  124 bits (312), Expect = 4e-28
 Identities = 78/278 (28%), Positives = 146/278 (52%), Gaps = 10/278 (3%)
 Frame = -2

Query: 820 TYELLIRSCAQQKNLSDAFT----VHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKV 653
           TY  ++++C   ++L         VH H++ +G++    + T L+DMY+   S+ +A  V
Sbjct: 178 TYTYVLKACVASESLISLLLTGKEVHAHILRHGYESLVHITTTLVDMYARFGSVSYASYV 237

Query: 652 FDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKM---NRIGMPSDRFTYTYALKACVVS 482
           FDE+  + +  W+A+      +G   E L L+R+M    +  +P+   T    L+AC   
Sbjct: 238 FDEMPVRNVVSWSAMIACYVKNGRAFEALELFREMILETQDSIPNS-VTMVSVLQACAA- 295

Query: 481 ESRISLLCHGKEIHAHILRHGYEGHVHVMTTLVDMYAKFGCVENASFVFSSMPVKNLVSW 302
              ++ L  GK IH +ILR G +  + V++ L+ MYA+ G +E    VF  M  +++VSW
Sbjct: 296 ---LAALEQGKLIHGYILRRGLDSILPVISALLTMYARCGKLELGQRVFDQMEKRDVVSW 352

Query: 301 SAMIACFSKNGRPFEALELFREMMLESGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYI 122
           +++I+ +  +G    A+++F EM+     + P+ V+ VSVL AC+    +E+GK++   +
Sbjct: 353 NSLISSYGIHGCGRRAIKIFEEMIYHG--VSPSHVSFVSVLGACSHAGFVEEGKMLFESM 410

Query: 121 LRNGLDNILPVM---SALVTMYARCGDLDLGRNVFNQM 17
           ++     I P +   + +V +  R   LD    +  +M
Sbjct: 411 VKQ--HRIYPSVEHYACMVDILGRANQLDAAAKIIEEM 446



 Score = 58.5 bits (140), Expect = 8e-06
 Identities = 36/187 (19%), Positives = 84/187 (44%), Gaps = 1/187 (0%)
 Frame = -2

Query: 874 QLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHRHLIDNGFDEDPFLATKLID 695
           +L + + L T +  P   T   ++++CA    L     +H +++  G D    + + L+ 
Sbjct: 267 ELFREMILETQDSIPNSVTMVSVLQACAALAALEQGKLIHGYILRRGLDSILPVISALLT 326

Query: 694 MYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKMNRIGMPSDRFT 515
           MY+    ++  ++VFD++  + +  WN++  S  + G G   + ++ +M   G+     +
Sbjct: 327 MYARCGKLELGQRVFDQMEKRDVVSWNSLISSYGIHGCGRRAIKIFEEMIYHGVSPSHVS 386

Query: 514 YTYALKACVVSESRISLLCHGKEI-HAHILRHGYEGHVHVMTTLVDMYAKFGCVENASFV 338
           +   L AC    S    +  GK +  + + +H     V     +VD+  +   ++ A+ +
Sbjct: 387 FVSVLGAC----SHAGFVEEGKMLFESMVKQHRIYPSVEHYACMVDILGRANQLDAAAKI 442

Query: 337 FSSMPVK 317
              M ++
Sbjct: 443 IEEMRIE 449


>ref|XP_023910914.1| pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Quercus suber]
          Length = 655

 Score =  466 bits (1198), Expect = e-158
 Identities = 225/308 (73%), Positives = 266/308 (86%)
 Frame = -2

Query: 925 KSTSNKNPSIQSLCKKGQLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHRHL 746
           K  +N N  IQSLCK+G LKQA+ +L HE NP QHTYE LI SC++Q +LSD   VHRHL
Sbjct: 42  KPETNCNHLIQSLCKQGSLKQALEVLAHEPNPTQHTYEALILSCSRQSSLSDGLDVHRHL 101

Query: 745 IDNGFDEDPFLATKLIDMYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEEVL 566
           +D GFD+DPFLATKLI+MYSELD+I +ARKVFDE   +TIYVWNA+FR+L+L+G+G+EVL
Sbjct: 102 VDAGFDQDPFLATKLINMYSELDAIDNARKVFDETRKRTIYVWNALFRALTLAGHGQEVL 161

Query: 565 SLYRKMNRIGMPSDRFTYTYALKACVVSESRISLLCHGKEIHAHILRHGYEGHVHVMTTL 386
            LYR+MN+IG+PSDRFTYTY LKACV SES ISLL  GKE+HAHILRHGYE  VH+ TTL
Sbjct: 162 DLYRRMNQIGIPSDRFTYTYVLKACVASESLISLLLTGKEVHAHILRHGYESLVHITTTL 221

Query: 385 VDMYAKFGCVENASFVFSSMPVKNLVSWSAMIACFSKNGRPFEALELFREMMLESGDMLP 206
           VDMYA+FG V  AS+VF  MPV+N+VSWSAMIAC+ KNGR FEALELFREM+LE+ D +P
Sbjct: 222 VDMYARFGSVSYASYVFDEMPVRNVVSWSAMIACYVKNGRAFEALELFREMILETQDSIP 281

Query: 205 NSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNVF 26
           NSVTMVSVLQACAA++ALEQGKLIHGYILR GLD+ILPV+SAL+TMYARCG L+LG+ VF
Sbjct: 282 NSVTMVSVLQACAALAALEQGKLIHGYILRRGLDSILPVISALLTMYARCGKLELGQRVF 341

Query: 25  NQMEKRDI 2
           +QMEKRD+
Sbjct: 342 DQMEKRDV 349



 Score =  124 bits (312), Expect = 4e-28
 Identities = 78/278 (28%), Positives = 146/278 (52%), Gaps = 10/278 (3%)
 Frame = -2

Query: 820 TYELLIRSCAQQKNLSDAFT----VHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKV 653
           TY  ++++C   ++L         VH H++ +G++    + T L+DMY+   S+ +A  V
Sbjct: 178 TYTYVLKACVASESLISLLLTGKEVHAHILRHGYESLVHITTTLVDMYARFGSVSYASYV 237

Query: 652 FDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKM---NRIGMPSDRFTYTYALKACVVS 482
           FDE+  + +  W+A+      +G   E L L+R+M    +  +P+   T    L+AC   
Sbjct: 238 FDEMPVRNVVSWSAMIACYVKNGRAFEALELFREMILETQDSIPNS-VTMVSVLQACAA- 295

Query: 481 ESRISLLCHGKEIHAHILRHGYEGHVHVMTTLVDMYAKFGCVENASFVFSSMPVKNLVSW 302
              ++ L  GK IH +ILR G +  + V++ L+ MYA+ G +E    VF  M  +++VSW
Sbjct: 296 ---LAALEQGKLIHGYILRRGLDSILPVISALLTMYARCGKLELGQRVFDQMEKRDVVSW 352

Query: 301 SAMIACFSKNGRPFEALELFREMMLESGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYI 122
           +++I+ +  +G    A+++F EM+     + P+ V+ VSVL AC+    +E+GK++   +
Sbjct: 353 NSLISSYGIHGCGRRAIKIFEEMIYHG--VSPSHVSFVSVLGACSHAGFVEEGKMLFESM 410

Query: 121 LRNGLDNILPVM---SALVTMYARCGDLDLGRNVFNQM 17
           ++     I P +   + +V +  R   LD    +  +M
Sbjct: 411 VKQ--HRIYPSVEHYACMVDILGRANQLDAAAKIIEEM 446



 Score = 58.5 bits (140), Expect = 8e-06
 Identities = 36/187 (19%), Positives = 84/187 (44%), Gaps = 1/187 (0%)
 Frame = -2

Query: 874 QLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHRHLIDNGFDEDPFLATKLID 695
           +L + + L T +  P   T   ++++CA    L     +H +++  G D    + + L+ 
Sbjct: 267 ELFREMILETQDSIPNSVTMVSVLQACAALAALEQGKLIHGYILRRGLDSILPVISALLT 326

Query: 694 MYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKMNRIGMPSDRFT 515
           MY+    ++  ++VFD++  + +  WN++  S  + G G   + ++ +M   G+     +
Sbjct: 327 MYARCGKLELGQRVFDQMEKRDVVSWNSLISSYGIHGCGRRAIKIFEEMIYHGVSPSHVS 386

Query: 514 YTYALKACVVSESRISLLCHGKEI-HAHILRHGYEGHVHVMTTLVDMYAKFGCVENASFV 338
           +   L AC    S    +  GK +  + + +H     V     +VD+  +   ++ A+ +
Sbjct: 387 FVSVLGAC----SHAGFVEEGKMLFESMVKQHRIYPSVEHYACMVDILGRANQLDAAAKI 442

Query: 337 FSSMPVK 317
              M ++
Sbjct: 443 IEEMRIE 449


>emb|CDP09112.1| unnamed protein product [Coffea canephora]
          Length = 656

 Score =  462 bits (1190), Expect = e-157
 Identities = 224/307 (72%), Positives = 266/307 (86%)
 Frame = -2

Query: 922 STSNKNPSIQSLCKKGQLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHRHLI 743
           ST N NPSIQSLC KGQLKQA+ LL+ E  P QHTYELLI SCA Q +LSDA  VHR LI
Sbjct: 44  STINHNPSIQSLCVKGQLKQALELLSQEPCPTQHTYELLILSCANQHSLSDALIVHRKLI 103

Query: 742 DNGFDEDPFLATKLIDMYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEEVLS 563
           DNGFD+DPFLATKLI+MY ELD I+  R+VFD+   KTIYVWNA+FR+L+L G GEEVL 
Sbjct: 104 DNGFDQDPFLATKLINMYHELDCIERVRQVFDKTLKKTIYVWNALFRALTLWGRGEEVLG 163

Query: 562 LYRKMNRIGMPSDRFTYTYALKACVVSESRISLLCHGKEIHAHILRHGYEGHVHVMTTLV 383
           LY +MNRIG+PSDRFTYTY LKACV +E+  SLL  GKEIHAHILRHGYE H+H+MTT+V
Sbjct: 164 LYSRMNRIGIPSDRFTYTYVLKACVAAETLGSLLQKGKEIHAHILRHGYESHIHIMTTMV 223

Query: 382 DMYAKFGCVENASFVFSSMPVKNLVSWSAMIACFSKNGRPFEALELFREMMLESGDMLPN 203
           DMYA+FGCV +A+ VF+SMPVKN+VSWSAMIAC++KNG+PF+ALELF +++L++ D LPN
Sbjct: 224 DMYARFGCVADATSVFNSMPVKNVVSWSAMIACYAKNGKPFDALELFHQLVLDNCDTLPN 283

Query: 202 SVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNVFN 23
           SVTMVSVLQACAAV+AL QGKLIHGYILR GLD+ILPV+SA+VTMYARCG+L+ G+ VF+
Sbjct: 284 SVTMVSVLQACAAVAALGQGKLIHGYILRKGLDSILPVISAMVTMYARCGNLEWGKRVFS 343

Query: 22  QMEKRDI 2
           QMEK+D+
Sbjct: 344 QMEKKDV 350



 Score =  121 bits (304), Expect = 5e-27
 Identities = 75/276 (27%), Positives = 142/276 (51%), Gaps = 8/276 (2%)
 Frame = -2

Query: 820 TYELLIRSCAQQKNLSDAFT----VHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKV 653
           TY  ++++C   + L         +H H++ +G++    + T ++DMY+    +  A  V
Sbjct: 179 TYTYVLKACVAAETLGSLLQKGKEIHAHILRHGYESHIHIMTTMVDMYARFGCVADATSV 238

Query: 652 FDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKM---NRIGMPSDRFTYTYALKACVVS 482
           F+ +  K +  W+A+    + +G   + L L+ ++   N   +P+   T    L+AC   
Sbjct: 239 FNSMPVKNVVSWSAMIACYAKNGKPFDALELFHQLVLDNCDTLPNS-VTMVSVLQACAA- 296

Query: 481 ESRISLLCHGKEIHAHILRHGYEGHVHVMTTLVDMYAKFGCVENASFVFSSMPVKNLVSW 302
              ++ L  GK IH +ILR G +  + V++ +V MYA+ G +E    VFS M  K++V+W
Sbjct: 297 ---VAALGQGKLIHGYILRKGLDSILPVISAMVTMYARCGNLEWGKRVFSQMEKKDVVAW 353

Query: 301 SAMIACFSKNGRPFEALELFREMMLESGDMLPNSVTMVSVLQACAAVSALEQGK-LIHGY 125
           ++MI+ +  +G   EA+E+F+EM+L    + P+ ++ VSVL AC+    +E+G+ L    
Sbjct: 354 NSMISSYGIHGFGREAIEVFKEMILSG--VSPSPISFVSVLGACSHSGLIEEGRFLFESM 411

Query: 124 ILRNGLDNILPVMSALVTMYARCGDLDLGRNVFNQM 17
           I  +G+   +   + +V +  R   L     +   M
Sbjct: 412 IKEHGITPTVEHYACMVDLLGRANQLYEAAKIIQDM 447



 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 34/173 (19%), Positives = 81/173 (46%), Gaps = 1/173 (0%)
 Frame = -2

Query: 832 PIQHTYELLIRSCAQQKNLSDAFTVHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKV 653
           P   T   ++++CA    L     +H +++  G D    + + ++ MY+   +++  ++V
Sbjct: 282 PNSVTMVSVLQACAAVAALGQGKLIHGYILRKGLDSILPVISAMVTMYARCGNLEWGKRV 341

Query: 652 FDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKMNRIGMPSDRFTYTYALKACVVSESR 473
           F ++  K +  WN++  S  + G+G E + ++++M   G+     ++   L AC    S 
Sbjct: 342 FSQMEKKDVVAWNSMISSYGIHGFGREAIEVFKEMILSGVSPSPISFVSVLGAC----SH 397

Query: 472 ISLLCHGKEIHAHILR-HGYEGHVHVMTTLVDMYAKFGCVENASFVFSSMPVK 317
             L+  G+ +   +++ HG    V     +VD+  +   +  A+ +   M ++
Sbjct: 398 SGLIEEGRFLFESMIKEHGITPTVEHYACMVDLLGRANQLYEAAKIIQDMRIE 450


>ref|XP_021642595.1| pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Hevea brasiliensis]
          Length = 658

 Score =  462 bits (1188), Expect = e-156
 Identities = 224/307 (72%), Positives = 264/307 (85%)
 Frame = -2

Query: 922 STSNKNPSIQSLCKKGQLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHRHLI 743
           +TSN N  IQSLCK+G LKQA+ LL+HE  P QHTYELLI SC  Q +L DA +VHRHL+
Sbjct: 46  TTSNNNQLIQSLCKQGNLKQALKLLSHEPEPTQHTYELLILSCTHQNSLPDAQSVHRHLL 105

Query: 742 DNGFDEDPFLATKLIDMYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEEVLS 563
           +NGFD+DPFLATKLI+MYS   SI  ARKVFD+   +TIYV+NA+FR+L+L G+GEEVLS
Sbjct: 106 ENGFDQDPFLATKLINMYSFFGSIHDARKVFDKTRRRTIYVYNALFRALTLGGHGEEVLS 165

Query: 562 LYRKMNRIGMPSDRFTYTYALKACVVSESRISLLCHGKEIHAHILRHGYEGHVHVMTTLV 383
           LYR+MN +G+PSDRFTYTY LKACV S+  ISLL  GKEIHA ILR GYE HVH+ TTLV
Sbjct: 166 LYRRMNSLGIPSDRFTYTYVLKACVASDCLISLLKKGKEIHAQILRRGYEAHVHIATTLV 225

Query: 382 DMYAKFGCVENASFVFSSMPVKNLVSWSAMIACFSKNGRPFEALELFREMMLESGDMLPN 203
           DMYA+FGCV  A FVF+ MPVKN+VSWSAMIAC++KNGRPFEALELFREM+LE+ D+ PN
Sbjct: 226 DMYARFGCVSYARFVFNEMPVKNVVSWSAMIACYAKNGRPFEALELFREMILENQDLCPN 285

Query: 202 SVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNVFN 23
           SVTMVSVLQACAA++ALEQG+LIHGYILR GLD+ILPV+SALVTMYARCG L+LG+ VF+
Sbjct: 286 SVTMVSVLQACAALAALEQGRLIHGYILRRGLDDILPVISALVTMYARCGKLELGQQVFD 345

Query: 22  QMEKRDI 2
           QM+KRD+
Sbjct: 346 QMDKRDV 352



 Score =  120 bits (300), Expect = 2e-26
 Identities = 77/276 (27%), Positives = 145/276 (52%), Gaps = 8/276 (2%)
 Frame = -2

Query: 820 TYELLIRSCAQQKNLSDAFT----VHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKV 653
           TY  ++++C     L         +H  ++  G++    +AT L+DMY+    + +AR V
Sbjct: 181 TYTYVLKACVASDCLISLLKKGKEIHAQILRRGYEAHVHIATTLVDMYARFGCVSYARFV 240

Query: 652 FDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKM---NRIGMPSDRFTYTYALKACVVS 482
           F+E+  K +  W+A+    + +G   E L L+R+M   N+   P+   T    L+AC   
Sbjct: 241 FNEMPVKNVVSWSAMIACYAKNGRPFEALELFREMILENQDLCPNS-VTMVSVLQACAA- 298

Query: 481 ESRISLLCHGKEIHAHILRHGYEGHVHVMTTLVDMYAKFGCVENASFVFSSMPVKNLVSW 302
              ++ L  G+ IH +ILR G +  + V++ LV MYA+ G +E    VF  M  +++VSW
Sbjct: 299 ---LAALEQGRLIHGYILRRGLDDILPVISALVTMYARCGKLELGQQVFDQMDKRDVVSW 355

Query: 301 SAMIACFSKNGRPFEALELFREMMLESGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYI 122
           +++I+ +  +G   +A+++F EM+ +   +LP+ ++ VSVL AC+    +E+GK++   +
Sbjct: 356 NSLISSYGVHGFGKKAIQIFEEMIHKG--VLPSPISFVSVLGACSHAGLVEEGKILFQSM 413

Query: 121 LRN-GLDNILPVMSALVTMYARCGDLDLGRNVFNQM 17
            +  G+   +   + +V +  R   L+    V   M
Sbjct: 414 HKKYGIYPSVEHYACMVDLLGRANRLEEAAKVIQDM 449



 Score = 61.6 bits (148), Expect = 8e-07
 Identities = 36/173 (20%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
 Frame = -2

Query: 832 PIQHTYELLIRSCAQQKNLSDAFTVHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKV 653
           P   T   ++++CA    L     +H +++  G D+   + + L+ MY+    ++  ++V
Sbjct: 284 PNSVTMVSVLQACAALAALEQGRLIHGYILRRGLDDILPVISALVTMYARCGKLELGQQV 343

Query: 652 FDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKMNRIGMPSDRFTYTYALKACVVSESR 473
           FD++  + +  WN++  S  + G+G++ + ++ +M   G+     ++   L AC    S 
Sbjct: 344 FDQMDKRDVVSWNSLISSYGVHGFGKKAIQIFEEMIHKGVLPSPISFVSVLGAC----SH 399

Query: 472 ISLLCHGKEIHAHI-LRHGYEGHVHVMTTLVDMYAKFGCVENASFVFSSMPVK 317
             L+  GK +   +  ++G    V     +VD+  +   +E A+ V   M ++
Sbjct: 400 AGLVEEGKILFQSMHKKYGIYPSVEHYACMVDLLGRANRLEEAAKVIQDMRIE 452


>ref|XP_012471277.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Gossypium raimondii]
 gb|KJB19990.1| hypothetical protein B456_003G128500 [Gossypium raimondii]
          Length = 651

 Score =  460 bits (1184), Expect = e-156
 Identities = 218/310 (70%), Positives = 265/310 (85%)
 Frame = -2

Query: 931 VRKSTSNKNPSIQSLCKKGQLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHR 752
           +  ST N N  IQSLCK+G LKQA  LL+ E NP Q TYE+LI SCA Q +LS A ++H 
Sbjct: 36  ISNSTPNHNQLIQSLCKQGDLKQAFKLLSREPNPSQRTYEVLILSCADQNSLSLAQSLHS 95

Query: 751 HLIDNGFDEDPFLATKLIDMYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEE 572
           H+ +NGFD+DPFL TKLI MY+ LDS+  ARKVFD+   +TI+VWNA+FR+L+L+G+GEE
Sbjct: 96  HISENGFDQDPFLVTKLISMYAALDSLDDARKVFDKTRKRTIFVWNALFRALTLAGFGEE 155

Query: 571 VLSLYRKMNRIGMPSDRFTYTYALKACVVSESRISLLCHGKEIHAHILRHGYEGHVHVMT 392
           VL LYRKMNRIG+PSDRFTYTY LKACV SE  +SLL  GKEIHAHILRHG EG+VH+MT
Sbjct: 156 VLGLYRKMNRIGLPSDRFTYTYVLKACVASECMVSLLNKGKEIHAHILRHGLEGYVHIMT 215

Query: 391 TLVDMYAKFGCVENASFVFSSMPVKNLVSWSAMIACFSKNGRPFEALELFREMMLESGDM 212
           TLVDMYA+FGCV +ASFVF  MPV+N+VSWSAM+AC++KNG+PFEALELFREMM+E+ D 
Sbjct: 216 TLVDMYARFGCVAHASFVFEKMPVRNVVSWSAMMACYAKNGKPFEALELFREMMIETQDS 275

Query: 211 LPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRN 32
            PNSVTMVSVLQACAA+SALEQGKL+H YILR GLD++LPV+SAL+TMYARCG+L+LG+ 
Sbjct: 276 APNSVTMVSVLQACAALSALEQGKLVHAYILRRGLDSVLPVISALITMYARCGELELGQR 335

Query: 31  VFNQMEKRDI 2
           +F++MEKRD+
Sbjct: 336 IFDRMEKRDV 345



 Score =  122 bits (307), Expect = 2e-27
 Identities = 75/275 (27%), Positives = 146/275 (53%), Gaps = 7/275 (2%)
 Frame = -2

Query: 820 TYELLIRSCAQQKN----LSDAFTVHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKV 653
           TY  ++++C   +     L+    +H H++ +G +    + T L+DMY+    + HA  V
Sbjct: 174 TYTYVLKACVASECMVSLLNKGKEIHAHILRHGLEGYVHIMTTLVDMYARFGCVAHASFV 233

Query: 652 FDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKMNRIGMPS--DRFTYTYALKACVVSE 479
           F+++  + +  W+A+    + +G   E L L+R+M      S  +  T    L+AC    
Sbjct: 234 FEKMPVRNVVSWSAMMACYAKNGKPFEALELFREMMIETQDSAPNSVTMVSVLQACAA-- 291

Query: 478 SRISLLCHGKEIHAHILRHGYEGHVHVMTTLVDMYAKFGCVENASFVFSSMPVKNLVSWS 299
             +S L  GK +HA+ILR G +  + V++ L+ MYA+ G +E    +F  M  +++VSW+
Sbjct: 292 --LSALEQGKLVHAYILRRGLDSVLPVISALITMYARCGELELGQRIFDRMEKRDVVSWN 349

Query: 298 AMIACFSKNGRPFEALELFREMMLESGDMLPNSVTMVSVLQACAAVSALEQG-KLIHGYI 122
           ++I+ +  +G   +A+++F+EM+ +   + P+S+T VSVL AC+    +E+G KL     
Sbjct: 350 SLISSYGLHGYGKKAMQIFQEMIHQG--VSPSSITFVSVLGACSHAGLVEEGKKLFDSMR 407

Query: 121 LRNGLDNILPVMSALVTMYARCGDLDLGRNVFNQM 17
             +G+   +   + +V +  R   L+    + ++M
Sbjct: 408 KEHGIHPSVEHYACMVDLLGRANRLEEAAKIIDEM 442



 Score = 73.9 bits (180), Expect = 7e-11
 Identities = 42/187 (22%), Positives = 89/187 (47%), Gaps = 1/187 (0%)
 Frame = -2

Query: 874 QLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHRHLIDNGFDEDPFLATKLID 695
           +L + + + T +  P   T   ++++CA    L     VH +++  G D    + + LI 
Sbjct: 263 ELFREMMIETQDSAPNSVTMVSVLQACAALSALEQGKLVHAYILRRGLDSVLPVISALIT 322

Query: 694 MYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKMNRIGMPSDRFT 515
           MY+    ++  +++FD +  + +  WN++  S  L GYG++ + ++++M   G+     T
Sbjct: 323 MYARCGELELGQRIFDRMEKRDVVSWNSLISSYGLHGYGKKAMQIFQEMIHQGVSPSSIT 382

Query: 514 YTYALKACVVSESRISLLCHGKEIHAHILR-HGYEGHVHVMTTLVDMYAKFGCVENASFV 338
           +   L AC    S   L+  GK++   + + HG    V     +VD+  +   +E A+ +
Sbjct: 383 FVSVLGAC----SHAGLVEEGKKLFDSMRKEHGIHPSVEHYACMVDLLGRANRLEEAAKI 438

Query: 337 FSSMPVK 317
              M ++
Sbjct: 439 IDEMRIE 445


>gb|PPD69149.1| hypothetical protein GOBAR_DD33973 [Gossypium barbadense]
          Length = 651

 Score =  460 bits (1183), Expect = e-156
 Identities = 218/310 (70%), Positives = 265/310 (85%)
 Frame = -2

Query: 931 VRKSTSNKNPSIQSLCKKGQLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHR 752
           +  ST N+N  IQSLCK+G LKQA  LL+ E N  Q TYE+LI SCA Q +LS A ++H 
Sbjct: 36  ISNSTPNRNQLIQSLCKQGDLKQAFKLLSREPNASQRTYEVLILSCADQNSLSLAQSLHS 95

Query: 751 HLIDNGFDEDPFLATKLIDMYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEE 572
           H+ +NGFD+DPFL TKLI MY+ LDS+  ARKVFD+   +TI+VWNA+FR+L+L+G+GEE
Sbjct: 96  HISENGFDQDPFLVTKLISMYAALDSLDDARKVFDKTRKRTIFVWNALFRALTLAGFGEE 155

Query: 571 VLSLYRKMNRIGMPSDRFTYTYALKACVVSESRISLLCHGKEIHAHILRHGYEGHVHVMT 392
           VL LYRKMNRIG+PSDRFTYTY LKACV SE  +SLL  GKEIHAHILRHG EG+VH+MT
Sbjct: 156 VLGLYRKMNRIGLPSDRFTYTYVLKACVASECMVSLLNKGKEIHAHILRHGLEGYVHIMT 215

Query: 391 TLVDMYAKFGCVENASFVFSSMPVKNLVSWSAMIACFSKNGRPFEALELFREMMLESGDM 212
           TLVDMYA+FGCV +ASFVF  MPV+N+VSWSAM+AC++KNG+PFEALELFREMM+E+ D 
Sbjct: 216 TLVDMYARFGCVAHASFVFEKMPVRNVVSWSAMMACYAKNGKPFEALELFREMMIETQDS 275

Query: 211 LPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRN 32
            PNSVTMVSVLQACAA+SALEQGKL+H YILR GLD++LPV+SAL+TMYARCG+L+LG+ 
Sbjct: 276 APNSVTMVSVLQACAALSALEQGKLVHAYILRRGLDSVLPVISALITMYARCGELELGQR 335

Query: 31  VFNQMEKRDI 2
           +F+QMEKRD+
Sbjct: 336 IFDQMEKRDV 345



 Score =  122 bits (306), Expect = 2e-27
 Identities = 74/275 (26%), Positives = 147/275 (53%), Gaps = 7/275 (2%)
 Frame = -2

Query: 820 TYELLIRSCAQQKN----LSDAFTVHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKV 653
           TY  ++++C   +     L+    +H H++ +G +    + T L+DMY+    + HA  V
Sbjct: 174 TYTYVLKACVASECMVSLLNKGKEIHAHILRHGLEGYVHIMTTLVDMYARFGCVAHASFV 233

Query: 652 FDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKMNRIGMPS--DRFTYTYALKACVVSE 479
           F+++  + +  W+A+    + +G   E L L+R+M      S  +  T    L+AC    
Sbjct: 234 FEKMPVRNVVSWSAMMACYAKNGKPFEALELFREMMIETQDSAPNSVTMVSVLQACAA-- 291

Query: 478 SRISLLCHGKEIHAHILRHGYEGHVHVMTTLVDMYAKFGCVENASFVFSSMPVKNLVSWS 299
             +S L  GK +HA+ILR G +  + V++ L+ MYA+ G +E    +F  M  +++VSW+
Sbjct: 292 --LSALEQGKLVHAYILRRGLDSVLPVISALITMYARCGELELGQRIFDQMEKRDVVSWN 349

Query: 298 AMIACFSKNGRPFEALELFREMMLESGDMLPNSVTMVSVLQACAAVSALEQGKLIHGYIL 119
           ++I+ +  +G   +A+++F+EM+ +   + P+ +T VSVL AC+    +E+GK +   +L
Sbjct: 350 SLISSYGLHGYGKKAMQIFQEMIHQG--VSPSPITFVSVLGACSHAGLVEEGKKLFDSML 407

Query: 118 R-NGLDNILPVMSALVTMYARCGDLDLGRNVFNQM 17
           + +G    +   + +V +  R   L+    + ++M
Sbjct: 408 KEHGTHPSVEHYACMVDLLGRANRLEEAAKIIDEM 442



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 43/187 (22%), Positives = 91/187 (48%), Gaps = 1/187 (0%)
 Frame = -2

Query: 874 QLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHRHLIDNGFDEDPFLATKLID 695
           +L + + + T +  P   T   ++++CA    L     VH +++  G D    + + LI 
Sbjct: 263 ELFREMMIETQDSAPNSVTMVSVLQACAALSALEQGKLVHAYILRRGLDSVLPVISALIT 322

Query: 694 MYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKMNRIGMPSDRFT 515
           MY+    ++  +++FD++  + +  WN++  S  L GYG++ + ++++M   G+     T
Sbjct: 323 MYARCGELELGQRIFDQMEKRDVVSWNSLISSYGLHGYGKKAMQIFQEMIHQGVSPSPIT 382

Query: 514 YTYALKACVVSESRISLLCHGKEIHAHILR-HGYEGHVHVMTTLVDMYAKFGCVENASFV 338
           +   L AC    S   L+  GK++   +L+ HG    V     +VD+  +   +E A+ +
Sbjct: 383 FVSVLGAC----SHAGLVEEGKKLFDSMLKEHGTHPSVEHYACMVDLLGRANRLEEAAKI 438

Query: 337 FSSMPVK 317
              M ++
Sbjct: 439 IDEMRIE 445


>ref|XP_016740545.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic isoform X1 [Gossypium hirsutum]
 ref|XP_016740546.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic isoform X2 [Gossypium hirsutum]
          Length = 651

 Score =  460 bits (1183), Expect = e-156
 Identities = 218/310 (70%), Positives = 265/310 (85%)
 Frame = -2

Query: 931 VRKSTSNKNPSIQSLCKKGQLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHR 752
           +  ST N N  IQSLCK+G LKQA  LL+ E NP Q TYE+LI SCA Q +LS A ++H 
Sbjct: 36  ISNSTPNHNQLIQSLCKQGDLKQAFKLLSREPNPSQRTYEVLILSCADQNSLSLAQSLHS 95

Query: 751 HLIDNGFDEDPFLATKLIDMYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEE 572
           H+ +NGFD+DPFL TKLI MY+ LDS+  ARKVFD+   +TI+VWNA+FR+L+L+G+GEE
Sbjct: 96  HISENGFDQDPFLVTKLISMYAVLDSLDDARKVFDKTRKRTIFVWNALFRALTLAGFGEE 155

Query: 571 VLSLYRKMNRIGMPSDRFTYTYALKACVVSESRISLLCHGKEIHAHILRHGYEGHVHVMT 392
           VL LYRKMNRIG+PSDRFTYTY LKACV SE  +SLL  GKEIHAHILRHG EG+VH+MT
Sbjct: 156 VLGLYRKMNRIGLPSDRFTYTYVLKACVASECMVSLLNKGKEIHAHILRHGLEGYVHIMT 215

Query: 391 TLVDMYAKFGCVENASFVFSSMPVKNLVSWSAMIACFSKNGRPFEALELFREMMLESGDM 212
           TLVDMYA+FGCV +ASFVF  MPV+N+VSWSAM+AC++KNG+PFEALELFREMM+E+ D 
Sbjct: 216 TLVDMYARFGCVAHASFVFEKMPVRNVVSWSAMMACYAKNGKPFEALELFREMMIETRDS 275

Query: 211 LPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRN 32
            PNSVTMVSVLQACAA+SALEQGKL+H YILR GLD++LPV+SAL+TMYARCG+L+LG+ 
Sbjct: 276 APNSVTMVSVLQACAALSALEQGKLVHAYILRRGLDSVLPVISALITMYARCGELELGQR 335

Query: 31  VFNQMEKRDI 2
           +F++MEKRD+
Sbjct: 336 IFDRMEKRDV 345



 Score =  122 bits (306), Expect = 2e-27
 Identities = 75/276 (27%), Positives = 145/276 (52%), Gaps = 8/276 (2%)
 Frame = -2

Query: 820 TYELLIRSCAQQKN----LSDAFTVHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKV 653
           TY  ++++C   +     L+    +H H++ +G +    + T L+DMY+    + HA  V
Sbjct: 174 TYTYVLKACVASECMVSLLNKGKEIHAHILRHGLEGYVHIMTTLVDMYARFGCVAHASFV 233

Query: 652 FDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKM---NRIGMPSDRFTYTYALKACVVS 482
           F+++  + +  W+A+    + +G   E L L+R+M    R   P+   T    L+AC   
Sbjct: 234 FEKMPVRNVVSWSAMMACYAKNGKPFEALELFREMMIETRDSAPNS-VTMVSVLQACAA- 291

Query: 481 ESRISLLCHGKEIHAHILRHGYEGHVHVMTTLVDMYAKFGCVENASFVFSSMPVKNLVSW 302
              +S L  GK +HA+ILR G +  + V++ L+ MYA+ G +E    +F  M  +++VSW
Sbjct: 292 ---LSALEQGKLVHAYILRRGLDSVLPVISALITMYARCGELELGQRIFDRMEKRDVVSW 348

Query: 301 SAMIACFSKNGRPFEALELFREMMLESGDMLPNSVTMVSVLQACAAVSALEQG-KLIHGY 125
           +++I+ +  +G   +A+++F EM+ +   + P+ +T VSVL AC+    +E+G KL    
Sbjct: 349 NSLISSYGLHGYGKKAMQIFEEMIHQG--VSPSPITFVSVLGACSHAGLVEEGKKLFDSM 406

Query: 124 ILRNGLDNILPVMSALVTMYARCGDLDLGRNVFNQM 17
              +G+   +   + +V +  R   L+    + ++M
Sbjct: 407 CKEHGIHPSVEHYACMVDLLGRANRLEEAAKIIDEM 442



 Score = 73.6 bits (179), Expect = 9e-11
 Identities = 42/187 (22%), Positives = 88/187 (47%), Gaps = 1/187 (0%)
 Frame = -2

Query: 874 QLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHRHLIDNGFDEDPFLATKLID 695
           +L + + + T +  P   T   ++++CA    L     VH +++  G D    + + LI 
Sbjct: 263 ELFREMMIETRDSAPNSVTMVSVLQACAALSALEQGKLVHAYILRRGLDSVLPVISALIT 322

Query: 694 MYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKMNRIGMPSDRFT 515
           MY+    ++  +++FD +  + +  WN++  S  L GYG++ + ++ +M   G+     T
Sbjct: 323 MYARCGELELGQRIFDRMEKRDVVSWNSLISSYGLHGYGKKAMQIFEEMIHQGVSPSPIT 382

Query: 514 YTYALKACVVSESRISLLCHGKEIHAHILR-HGYEGHVHVMTTLVDMYAKFGCVENASFV 338
           +   L AC    S   L+  GK++   + + HG    V     +VD+  +   +E A+ +
Sbjct: 383 FVSVLGAC----SHAGLVEEGKKLFDSMCKEHGIHPSVEHYACMVDLLGRANRLEEAAKI 438

Query: 337 FSSMPVK 317
              M ++
Sbjct: 439 IDEMRIE 445


>ref|XP_017638570.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Gossypium arboreum]
          Length = 651

 Score =  459 bits (1181), Expect = e-155
 Identities = 217/310 (70%), Positives = 265/310 (85%)
 Frame = -2

Query: 931 VRKSTSNKNPSIQSLCKKGQLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHR 752
           +  ST N N  IQSLCK+G LKQA  LL+ E NP Q TYE+LI SCA Q +LS A ++H 
Sbjct: 36  ISNSTPNHNQLIQSLCKQGDLKQAFKLLSREPNPSQRTYEVLILSCADQNSLSLAQSLHS 95

Query: 751 HLIDNGFDEDPFLATKLIDMYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEE 572
           H+ +NGFD+DPFL TKLI MY+ LDS+  ARKVFD+   +TI+VWNA+FR+L+L+G+GEE
Sbjct: 96  HISENGFDQDPFLVTKLISMYAALDSLDDARKVFDKTRKRTIFVWNALFRALTLAGFGEE 155

Query: 571 VLSLYRKMNRIGMPSDRFTYTYALKACVVSESRISLLCHGKEIHAHILRHGYEGHVHVMT 392
           VL LYRKMNRIG+PSDRFTYTY LKACV SE  +SLL  GKEIHAHILRHG EG+VH+MT
Sbjct: 156 VLGLYRKMNRIGLPSDRFTYTYVLKACVASECMVSLLNKGKEIHAHILRHGLEGYVHIMT 215

Query: 391 TLVDMYAKFGCVENASFVFSSMPVKNLVSWSAMIACFSKNGRPFEALELFREMMLESGDM 212
           TLVDMYA+FGCV +ASFVF  MPV+N+VSWSAM+AC++KNG+PFEALELFREMM+E+ D 
Sbjct: 216 TLVDMYARFGCVAHASFVFEKMPVRNVVSWSAMMACYAKNGKPFEALELFREMMIETRDS 275

Query: 211 LPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRN 32
            PNSVTMVSVLQACAA+SALEQGKL+H YILR GLD++LP++SAL+TMYARCG+L+LG+ 
Sbjct: 276 APNSVTMVSVLQACAALSALEQGKLVHAYILRRGLDSVLPLISALITMYARCGELELGQR 335

Query: 31  VFNQMEKRDI 2
           +F++MEKRD+
Sbjct: 336 IFDRMEKRDV 345



 Score =  121 bits (304), Expect = 4e-27
 Identities = 74/276 (26%), Positives = 146/276 (52%), Gaps = 8/276 (2%)
 Frame = -2

Query: 820 TYELLIRSCAQQKN----LSDAFTVHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKV 653
           TY  ++++C   +     L+    +H H++ +G +    + T L+DMY+    + HA  V
Sbjct: 174 TYTYVLKACVASECMVSLLNKGKEIHAHILRHGLEGYVHIMTTLVDMYARFGCVAHASFV 233

Query: 652 FDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKM---NRIGMPSDRFTYTYALKACVVS 482
           F+++  + +  W+A+    + +G   E L L+R+M    R   P+   T    L+AC   
Sbjct: 234 FEKMPVRNVVSWSAMMACYAKNGKPFEALELFREMMIETRDSAPNS-VTMVSVLQACAA- 291

Query: 481 ESRISLLCHGKEIHAHILRHGYEGHVHVMTTLVDMYAKFGCVENASFVFSSMPVKNLVSW 302
              +S L  GK +HA+ILR G +  + +++ L+ MYA+ G +E    +F  M  +++VSW
Sbjct: 292 ---LSALEQGKLVHAYILRRGLDSVLPLISALITMYARCGELELGQRIFDRMEKRDVVSW 348

Query: 301 SAMIACFSKNGRPFEALELFREMMLESGDMLPNSVTMVSVLQACAAVSALEQG-KLIHGY 125
           +++I+ +  +G   +A+++F+EM+ +   + P+ +T VSVL AC+    +E+G KL    
Sbjct: 349 NSLISSYGLHGYGKKAMQIFQEMIHQG--VSPSPITFVSVLGACSHAGLVEEGKKLFDSM 406

Query: 124 ILRNGLDNILPVMSALVTMYARCGDLDLGRNVFNQM 17
              +G+   +   + +V +  R   L+    + ++M
Sbjct: 407 CKEHGIHPSVEHYACMVDLLGRANRLEEAAKIIDEM 442



 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 43/187 (22%), Positives = 89/187 (47%), Gaps = 1/187 (0%)
 Frame = -2

Query: 874 QLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHRHLIDNGFDEDPFLATKLID 695
           +L + + + T +  P   T   ++++CA    L     VH +++  G D    L + LI 
Sbjct: 263 ELFREMMIETRDSAPNSVTMVSVLQACAALSALEQGKLVHAYILRRGLDSVLPLISALIT 322

Query: 694 MYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKMNRIGMPSDRFT 515
           MY+    ++  +++FD +  + +  WN++  S  L GYG++ + ++++M   G+     T
Sbjct: 323 MYARCGELELGQRIFDRMEKRDVVSWNSLISSYGLHGYGKKAMQIFQEMIHQGVSPSPIT 382

Query: 514 YTYALKACVVSESRISLLCHGKEIHAHILR-HGYEGHVHVMTTLVDMYAKFGCVENASFV 338
           +   L AC    S   L+  GK++   + + HG    V     +VD+  +   +E A+ +
Sbjct: 383 FVSVLGAC----SHAGLVEEGKKLFDSMCKEHGIHPSVEHYACMVDLLGRANRLEEAAKI 438

Query: 337 FSSMPVK 317
              M ++
Sbjct: 439 IDEMRIE 445


>gb|PPS07722.1| hypothetical protein GOBAR_AA12923 [Gossypium barbadense]
          Length = 651

 Score =  459 bits (1180), Expect = e-155
 Identities = 217/310 (70%), Positives = 265/310 (85%)
 Frame = -2

Query: 931 VRKSTSNKNPSIQSLCKKGQLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHR 752
           +  ST N N  IQSLCK+G LKQA  LL+ E NP Q TYE+LI SCA Q +LS A ++H 
Sbjct: 36  ISNSTPNHNQLIQSLCKQGDLKQAFKLLSQEPNPSQRTYEVLILSCADQNSLSLAQSLHS 95

Query: 751 HLIDNGFDEDPFLATKLIDMYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEE 572
           H+ +NGFD+DPFL TKLI MY+ LDS+  ARKVFD+   +TI+VWNA+FR+L+L+G+GEE
Sbjct: 96  HISENGFDQDPFLVTKLISMYAVLDSLDDARKVFDKTRKRTIFVWNALFRALTLAGFGEE 155

Query: 571 VLSLYRKMNRIGMPSDRFTYTYALKACVVSESRISLLCHGKEIHAHILRHGYEGHVHVMT 392
           VL LYRKMNRIG+PSDRFTYTY LKACV SE  +SLL  GKEIHAHILRHG EG+VH+MT
Sbjct: 156 VLGLYRKMNRIGLPSDRFTYTYVLKACVASECMVSLLNKGKEIHAHILRHGLEGYVHIMT 215

Query: 391 TLVDMYAKFGCVENASFVFSSMPVKNLVSWSAMIACFSKNGRPFEALELFREMMLESGDM 212
           TLVDMYA+FGCV +ASFVF  MPV+N+VSWSAM+AC++KNG+PFEALELFREMM+E+ D 
Sbjct: 216 TLVDMYARFGCVAHASFVFEKMPVRNVVSWSAMMACYAKNGKPFEALELFREMMIETQDS 275

Query: 211 LPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRN 32
            PN+VTMVSVLQACAA+SALEQGKL+H YILR GLD++LPV+SAL+TMYARCG+L+LG+ 
Sbjct: 276 APNAVTMVSVLQACAALSALEQGKLVHAYILRRGLDSVLPVISALITMYARCGELELGQR 335

Query: 31  VFNQMEKRDI 2
           +F++MEKRD+
Sbjct: 336 IFDRMEKRDV 345



 Score =  120 bits (300), Expect = 2e-26
 Identities = 74/275 (26%), Positives = 144/275 (52%), Gaps = 7/275 (2%)
 Frame = -2

Query: 820 TYELLIRSCAQQKN----LSDAFTVHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKV 653
           TY  ++++C   +     L+    +H H++ +G +    + T L+DMY+    + HA  V
Sbjct: 174 TYTYVLKACVASECMVSLLNKGKEIHAHILRHGLEGYVHIMTTLVDMYARFGCVAHASFV 233

Query: 652 FDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKMNRIGMPS--DRFTYTYALKACVVSE 479
           F+++  + +  W+A+    + +G   E L L+R+M      S  +  T    L+AC    
Sbjct: 234 FEKMPVRNVVSWSAMMACYAKNGKPFEALELFREMMIETQDSAPNAVTMVSVLQACAA-- 291

Query: 478 SRISLLCHGKEIHAHILRHGYEGHVHVMTTLVDMYAKFGCVENASFVFSSMPVKNLVSWS 299
             +S L  GK +HA+ILR G +  + V++ L+ MYA+ G +E    +F  M  +++VSW+
Sbjct: 292 --LSALEQGKLVHAYILRRGLDSVLPVISALITMYARCGELELGQRIFDRMEKRDVVSWN 349

Query: 298 AMIACFSKNGRPFEALELFREMMLESGDMLPNSVTMVSVLQACAAVSALEQG-KLIHGYI 122
           ++I+ +  +G   +A+++F EM+ +   + P+ +T VSVL AC+    +E+G KL     
Sbjct: 350 SLISSYGLHGYGKKAMQIFEEMIHQG--VSPSPITFVSVLGACSHAGLVEEGKKLFDSMC 407

Query: 121 LRNGLDNILPVMSALVTMYARCGDLDLGRNVFNQM 17
             +G+   +   + +V +  R   L+    + ++M
Sbjct: 408 KEHGILPSVEHYACMVDLLGRANRLEEAAKIIDEM 442



 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 42/187 (22%), Positives = 88/187 (47%), Gaps = 1/187 (0%)
 Frame = -2

Query: 874 QLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHRHLIDNGFDEDPFLATKLID 695
           +L + + + T +  P   T   ++++CA    L     VH +++  G D    + + LI 
Sbjct: 263 ELFREMMIETQDSAPNAVTMVSVLQACAALSALEQGKLVHAYILRRGLDSVLPVISALIT 322

Query: 694 MYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKMNRIGMPSDRFT 515
           MY+    ++  +++FD +  + +  WN++  S  L GYG++ + ++ +M   G+     T
Sbjct: 323 MYARCGELELGQRIFDRMEKRDVVSWNSLISSYGLHGYGKKAMQIFEEMIHQGVSPSPIT 382

Query: 514 YTYALKACVVSESRISLLCHGKEIHAHILR-HGYEGHVHVMTTLVDMYAKFGCVENASFV 338
           +   L AC    S   L+  GK++   + + HG    V     +VD+  +   +E A+ +
Sbjct: 383 FVSVLGAC----SHAGLVEEGKKLFDSMCKEHGILPSVEHYACMVDLLGRANRLEEAAKI 438

Query: 337 FSSMPVK 317
              M ++
Sbjct: 439 IDEMRIE 445


>ref|XP_021278566.1| pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Herrania umbratica]
          Length = 651

 Score =  456 bits (1174), Expect = e-154
 Identities = 218/310 (70%), Positives = 260/310 (83%)
 Frame = -2

Query: 931 VRKSTSNKNPSIQSLCKKGQLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHR 752
           +  S  N N  IQSLCK+G LKQA  LL+ E NP Q TYELLI SCA Q +LS A ++H 
Sbjct: 36  ISTSNVNNNQLIQSLCKEGNLKQAFKLLSQEPNPSQRTYELLILSCAHQNSLSLAQSLHS 95

Query: 751 HLIDNGFDEDPFLATKLIDMYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEE 572
           H+  NGFD+DPFL TKLI MYS LDS+  ARK+FD+   +TI+VWNA+FR+L+L+G+GEE
Sbjct: 96  HISQNGFDQDPFLVTKLISMYSALDSVDDARKLFDKTRKRTIFVWNALFRALTLAGFGEE 155

Query: 571 VLSLYRKMNRIGMPSDRFTYTYALKACVVSESRISLLCHGKEIHAHILRHGYEGHVHVMT 392
           VL LYR+MNR G+PSDRFTYTY LKACV SE  +SLL  GKEIHAHILRHGYE HVH+MT
Sbjct: 156 VLGLYRQMNRTGIPSDRFTYTYVLKACVASECLVSLLKKGKEIHAHILRHGYEAHVHIMT 215

Query: 391 TLVDMYAKFGCVENASFVFSSMPVKNLVSWSAMIACFSKNGRPFEALELFREMMLESGDM 212
           TLVDMYA+FGCV NASFVF  MPV+N+VSWSAMIAC++KNG+ FEALELFREMM+E+ D 
Sbjct: 216 TLVDMYARFGCVSNASFVFGEMPVRNVVSWSAMIACYAKNGKSFEALELFREMMVETHDS 275

Query: 211 LPNSVTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRN 32
            PNSVTMVSVLQACAA++ALEQGKLIH YILR GLD++LPV+SAL+TMY+RCG L+LG+ 
Sbjct: 276 FPNSVTMVSVLQACAALAALEQGKLIHAYILRRGLDSVLPVISALITMYSRCGKLELGQR 335

Query: 31  VFNQMEKRDI 2
           +F+QMEKRD+
Sbjct: 336 IFDQMEKRDV 345



 Score =  123 bits (308), Expect = 1e-27
 Identities = 72/273 (26%), Positives = 148/273 (54%), Gaps = 5/273 (1%)
 Frame = -2

Query: 820 TYELLIRSCAQQKNLSDAFT----VHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKV 653
           TY  ++++C   + L         +H H++ +G++    + T L+DMY+    + +A  V
Sbjct: 174 TYTYVLKACVASECLVSLLKKGKEIHAHILRHGYEAHVHIMTTLVDMYARFGCVSNASFV 233

Query: 652 FDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKMNRIGMPSDRFTYTYALKACVVSESR 473
           F E+  + +  W+A+    + +G   E L L+R+M  +    D F  +  + + + + + 
Sbjct: 234 FGEMPVRNVVSWSAMIACYAKNGKSFEALELFREM--MVETHDSFPNSVTMVSVLQACAA 291

Query: 472 ISLLCHGKEIHAHILRHGYEGHVHVMTTLVDMYAKFGCVENASFVFSSMPVKNLVSWSAM 293
           ++ L  GK IHA+ILR G +  + V++ L+ MY++ G +E    +F  M  +++VSW+++
Sbjct: 292 LAALEQGKLIHAYILRRGLDSVLPVISALITMYSRCGKLELGQRIFDQMEKRDVVSWNSL 351

Query: 292 IACFSKNGRPFEALELFREMMLESGDMLPNSVTMVSVLQACAAVSALEQGK-LIHGYILR 116
           I+ ++ +G   +A+++F+EM+ +   +LP+ VT VSVL AC+    +E+GK L       
Sbjct: 352 ISSYAVHGFGKKAIQIFQEMIHQG--VLPSPVTFVSVLGACSHAGLVEEGKRLFDSMHKE 409

Query: 115 NGLDNILPVMSALVTMYARCGDLDLGRNVFNQM 17
           +G+   +   + +V +  R   L+    + ++M
Sbjct: 410 HGIYPSVEHYACMVDLLGRANRLEEAARIIDEM 442



 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 41/187 (21%), Positives = 91/187 (48%), Gaps = 1/187 (0%)
 Frame = -2

Query: 874 QLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHRHLIDNGFDEDPFLATKLID 695
           +L + + + TH+  P   T   ++++CA    L     +H +++  G D    + + LI 
Sbjct: 263 ELFREMMVETHDSFPNSVTMVSVLQACAALAALEQGKLIHAYILRRGLDSVLPVISALIT 322

Query: 694 MYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKMNRIGMPSDRFT 515
           MYS    ++  +++FD++  + +  WN++  S ++ G+G++ + ++++M   G+     T
Sbjct: 323 MYSRCGKLELGQRIFDQMEKRDVVSWNSLISSYAVHGFGKKAIQIFQEMIHQGVLPSPVT 382

Query: 514 YTYALKACVVSESRISLLCHGKEIHAHILR-HGYEGHVHVMTTLVDMYAKFGCVENASFV 338
           +   L AC    S   L+  GK +   + + HG    V     +VD+  +   +E A+ +
Sbjct: 383 FVSVLGAC----SHAGLVEEGKRLFDSMHKEHGIYPSVEHYACMVDLLGRANRLEEAARI 438

Query: 337 FSSMPVK 317
              M ++
Sbjct: 439 IDEMRIE 445


>gb|EEF41913.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 414

 Score =  447 bits (1151), Expect = e-154
 Identities = 220/306 (71%), Positives = 259/306 (84%)
 Frame = -2

Query: 919 TSNKNPSIQSLCKKGQLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHRHLID 740
           T+N N  IQSLCK+G LKQA+ LL +E +P QHTYELL+ SC  Q +  DA  VH+HL+D
Sbjct: 40  TANSNKLIQSLCKQGNLKQALNLLCNEPDPAQHTYELLLLSCTHQNSFLDAQFVHQHLLD 99

Query: 739 NGFDEDPFLATKLIDMYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEEVLSL 560
           NGFD+DPFLATKLI+MYS   SI +ARKVFD+  ++T+YV+NA+FR+L+L G GEEVL L
Sbjct: 100 NGFDQDPFLATKLINMYSSFGSIDNARKVFDKTRSRTLYVYNALFRALTLVGNGEEVLRL 159

Query: 559 YRKMNRIGMPSDRFTYTYALKACVVSESRISLLCHGKEIHAHILRHGYEGHVHVMTTLVD 380
           YR+MN IGMPSDRFTYTY LKACV S S +SLL  GKEIHA ILR GYE HVH+MTTLVD
Sbjct: 160 YRRMNSIGMPSDRFTYTYVLKACVASNSLLSLLKKGKEIHAQILRRGYEAHVHIMTTLVD 219

Query: 379 MYAKFGCVENASFVFSSMPVKNLVSWSAMIACFSKNGRPFEALELFREMMLESGDMLPNS 200
           MYA+FG V  AS VFS M VKN+VSWSAMIAC++KNGRPFEALELFREMMLE+ DM PNS
Sbjct: 220 MYARFGYVSYASCVFSEMSVKNVVSWSAMIACYAKNGRPFEALELFREMMLETKDMCPNS 279

Query: 199 VTMVSVLQACAAVSALEQGKLIHGYILRNGLDNILPVMSALVTMYARCGDLDLGRNVFNQ 20
           VTMVSVLQACAA++ALEQGKL+HGYILR GLD+ILPV+S+LVTMYARCG L L ++VF+Q
Sbjct: 280 VTMVSVLQACAALAALEQGKLLHGYILRRGLDSILPVISSLVTMYARCGKLQLAQHVFDQ 339

Query: 19  MEKRDI 2
           M+KRD+
Sbjct: 340 MDKRDV 345



 Score =  117 bits (294), Expect = 2e-26
 Identities = 66/235 (28%), Positives = 128/235 (54%), Gaps = 6/235 (2%)
 Frame = -2

Query: 820 TYELLIRSCAQQKNLSDAFT----VHRHLIDNGFDEDPFLATKLIDMYSELDSIQHARKV 653
           TY  ++++C    +L         +H  ++  G++    + T L+DMY+    + +A  V
Sbjct: 174 TYTYVLKACVASNSLLSLLKKGKEIHAQILRRGYEAHVHIMTTLVDMYARFGYVSYASCV 233

Query: 652 FDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKM--NRIGMPSDRFTYTYALKACVVSE 479
           F E++ K +  W+A+    + +G   E L L+R+M      M  +  T    L+AC    
Sbjct: 234 FSEMSVKNVVSWSAMIACYAKNGRPFEALELFREMMLETKDMCPNSVTMVSVLQACAA-- 291

Query: 478 SRISLLCHGKEIHAHILRHGYEGHVHVMTTLVDMYAKFGCVENASFVFSSMPVKNLVSWS 299
             ++ L  GK +H +ILR G +  + V+++LV MYA+ G ++ A  VF  M  +++VSW+
Sbjct: 292 --LAALEQGKLLHGYILRRGLDSILPVISSLVTMYARCGKLQLAQHVFDQMDKRDVVSWN 349

Query: 298 AMIACFSKNGRPFEALELFREMMLESGDMLPNSVTMVSVLQACAAVSALEQGKLI 134
           ++I+ +  +G   +A+++F++M      + P+ ++ VSVL AC+    +E+GK++
Sbjct: 350 SLISSYGVHGFGKKAIQIFKDM--TRNGVFPSPISFVSVLGACSHAGLVEEGKIL 402



 Score = 61.6 bits (148), Expect = 6e-07
 Identities = 33/139 (23%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
 Frame = -2

Query: 874 QLKQAIYLLTHEENPIQHTYELLIRSCAQQKNLSDAFTVHRHLIDNGFDEDPFLATKLID 695
           +L + + L T +  P   T   ++++CA    L     +H +++  G D    + + L+ 
Sbjct: 263 ELFREMMLETKDMCPNSVTMVSVLQACAALAALEQGKLLHGYILRRGLDSILPVISSLVT 322

Query: 694 MYSELDSIQHARKVFDEITNKTIYVWNAIFRSLSLSGYGEEVLSLYRKMNRIGMPSDRFT 515
           MY+    +Q A+ VFD++  + +  WN++  S  + G+G++ + +++ M R G+     +
Sbjct: 323 MYARCGKLQLAQHVFDQMDKRDVVSWNSLISSYGVHGFGKKAIQIFKDMTRNGVFPSPIS 382

Query: 514 YTYALKAC----VVSESRI 470
           +   L AC    +V E +I
Sbjct: 383 FVSVLGACSHAGLVEEGKI 401