BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00023406
         (967 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011090595.1| pentatricopeptide repeat-containing protein ...   516   e-180
ref|XP_012845185.1| PREDICTED: pentatricopeptide repeat-containi...   500   e-174
gb|PIN05720.1| hypothetical protein CDL12_21749 [Handroanthus im...   487   e-169
ref|XP_022894187.1| pentatricopeptide repeat-containing protein ...   464   e-160
gb|PON33583.1| Pentatricopeptide repeat [Parasponia andersonii]       433   e-147
gb|KZV37620.1| pentatricopeptide repeat-containing protein chlor...   433   e-147
gb|PON36814.1| Pentatricopeptide repeat [Trema orientalis]            432   e-147
ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containi...   430   e-146
ref|XP_015867273.1| PREDICTED: pentatricopeptide repeat-containi...   429   e-146
ref|XP_008364127.1| PREDICTED: pentatricopeptide repeat-containi...   424   e-144
ref|XP_016441969.1| PREDICTED: pentatricopeptide repeat-containi...   424   e-144
gb|PRQ38065.1| putative pentatricopeptide [Rosa chinensis]            416   e-143
ref|XP_011021906.1| PREDICTED: pentatricopeptide repeat-containi...   422   e-143
ref|XP_010245873.1| PREDICTED: pentatricopeptide repeat-containi...   422   e-143
ref|XP_023905919.1| pentatricopeptide repeat-containing protein ...   422   e-143
ref|XP_010681106.1| PREDICTED: pentatricopeptide repeat-containi...   421   e-143
gb|PNT35567.1| hypothetical protein POPTR_005G082400v3 [Populus ...   420   e-142
ref|XP_009345820.1| PREDICTED: pentatricopeptide repeat-containi...   419   e-142
ref|XP_019224228.1| PREDICTED: pentatricopeptide repeat-containi...   419   e-142
ref|XP_009608341.1| PREDICTED: pentatricopeptide repeat-containi...   419   e-142

>ref|XP_011090595.1| pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Sesamum indicum]
          Length = 492

 Score =  516 bits (1330), Expect = e-180
 Identities = 258/299 (86%), Positives = 273/299 (91%)
 Frame = -2

Query: 915 MTSISLPFTSSSLQLSPTLKFTHISTPIHAFTHHPSSPSGIRMCGVSARPQRKPGPKKTH 736
           MTS SLPFT SS QLSPT K T I TP  AFTH+P  PS IRMC  S +P++ PGPK+ +
Sbjct: 1   MTSSSLPFTCSSFQLSPTPKSTRIRTPTPAFTHNPFPPSAIRMCA-STQPKKIPGPKRIN 59

Query: 735 PKRXXXXXSEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSDKWLQC 556
            KR     SEAEDLVRL++RNFTDKQPLVNTLNKYVK VRTEHCFLLFEELG+SDKWLQC
Sbjct: 60  KKRGSSSSSEAEDLVRLLMRNFTDKQPLVNTLNKYVKLVRTEHCFLLFEELGKSDKWLQC 119

Query: 555 LEVFRWMQKQKWYIADNGVYSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALIT 376
           LE+FRWMQKQ+WYIADNGVYSK+ISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALIT
Sbjct: 120 LEMFRWMQKQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALIT 179

Query: 375 AHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKDLDE 196
           AHLHSRDKSKALAKAL YFEKMKGMERCKPSIVTYNILLRAFAQA+NVDQVNALFKDLDE
Sbjct: 180 AHLHSRDKSKALAKALWYFEKMKGMERCKPSIVTYNILLRAFAQARNVDQVNALFKDLDE 239

Query: 195 SIVTPDIYTFNGVMDAYGKIGMIREMESVLSRMKSNQIKPDIITFNLLIDAYGRKQEFD 19
           SIV+PDIYTFNGVMDAYGK+GMIREME VLSRMKSNQIKPDIITFNLLIDAYGRKQEFD
Sbjct: 240 SIVSPDIYTFNGVMDAYGKLGMIREMELVLSRMKSNQIKPDIITFNLLIDAYGRKQEFD 298



 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 37/157 (23%), Positives = 78/157 (49%), Gaps = 2/157 (1%)
 Frame = -2

Query: 498 YSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALITAHLHSR--DKSKALAKALS 325
           ++ V+   GK G  R    + S M+++  KPD   +N LI A+   +  DK + + K+L 
Sbjct: 249 FNGVMDAYGKLGMIREMELVLSRMKSNQIKPDIITFNLLIDAYGRKQEFDKMEQVFKSL- 307

Query: 324 YFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAY 145
               ++  E  KP++ T+N ++  + +A+  ++ + +F+ + E    P   T+  ++  Y
Sbjct: 308 ----LRSKE--KPTLPTFNSMITNYGKARLREKADLVFQKMTEMGYKPSFITYECLIMMY 361

Query: 144 GKIGMIREMESVLSRMKSNQIKPDIITFNLLIDAYGR 34
           G    I +   +  +M  ++ +  + T N ++D Y R
Sbjct: 362 GYCDCISKAREIFDQMAESEKEKKVSTLNAMLDVYCR 398


>ref|XP_012845185.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Erythranthe guttata]
 gb|EYU31068.1| hypothetical protein MIMGU_mgv1a024034mg [Erythranthe guttata]
          Length = 496

 Score =  500 bits (1287), Expect = e-174
 Identities = 246/300 (82%), Positives = 270/300 (90%), Gaps = 1/300 (0%)
 Frame = -2

Query: 915 MTSISLPFTSSSLQLSPTLKFTHISTPIHAFTHHPSSPSGIRMCG-VSARPQRKPGPKKT 739
           MTS + PFTSSSL L  T KFT+ISTP  A T HP  PS IRMC  VSARP+R PGP+KT
Sbjct: 1   MTSATPPFTSSSLHLPHTPKFTYISTPFRALTRHPCPPSTIRMCSWVSARPERNPGPRKT 60

Query: 738 HPKRXXXXXSEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSDKWLQ 559
           H +      SEAEDLV+LI+RNF+DKQPLVNTL+KYVKFVRT+HCFLLFEELG+++KWLQ
Sbjct: 61  HKRSTSSPSSEAEDLVKLIMRNFSDKQPLVNTLDKYVKFVRTDHCFLLFEELGKTEKWLQ 120

Query: 558 CLEVFRWMQKQKWYIADNGVYSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALI 379
           CLEVFRWMQKQ+WYIADNGVYSK+ISVMGKKGQTRMAMWLFSEMRNSGC+PDTSVYN+LI
Sbjct: 121 CLEVFRWMQKQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNSLI 180

Query: 378 TAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKDLD 199
           TAHLHSRDKSKALAK+L YFEKMK MERCKPSIVTYNILLRAFAQAKNVDQVN LFKDL+
Sbjct: 181 TAHLHSRDKSKALAKSLGYFEKMKSMERCKPSIVTYNILLRAFAQAKNVDQVNTLFKDLE 240

Query: 198 ESIVTPDIYTFNGVMDAYGKIGMIREMESVLSRMKSNQIKPDIITFNLLIDAYGRKQEFD 19
           ESIVTPDI+TFNGVMDAYGK GMIREME VL++MKSNQIKPD ITFN LIDAYG+KQEF+
Sbjct: 241 ESIVTPDIFTFNGVMDAYGKNGMIREMEFVLAKMKSNQIKPDTITFNSLIDAYGKKQEFE 300



 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 37/153 (24%), Positives = 75/153 (49%)
 Frame = -2

Query: 498 YSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALITAHLHSRDKSKALAKALSYF 319
           ++ V+   GK G  R   ++ ++M+++  KPDT  +N+LI A+     K +   K    F
Sbjct: 251 FNGVMDAYGKNGMIREMEFVLAKMKSNQIKPDTITFNSLIDAY----GKKQEFEKMEQVF 306

Query: 318 EKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGK 139
             +   +  KP++ T+N ++  + +A+  ++ + +FK + E    P   T+  ++  YG 
Sbjct: 307 TSLLRSKE-KPTLPTFNSMITNYGKARLREKGDLVFKRMTEMGYKPSFVTYECLITMYGY 365

Query: 138 IGMIREMESVLSRMKSNQIKPDIITFNLLIDAY 40
              +     V   M  ++ +  I T N ++DAY
Sbjct: 366 CDRVSRAREVFDEMVDSENEKKISTLNAMLDAY 398



 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 1/158 (0%)
 Frame = -2

Query: 510 DNGVYSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALITAHLHSRDKSKALAKA 331
           D   ++ +I   GKK +      +F+ +  S  KP    +N++IT +     K++   K 
Sbjct: 282 DTITFNSLIDAYGKKQEFEKMEQVFTSLLRSKEKPTLPTFNSMITNY----GKARLREKG 337

Query: 330 LSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMD 151
              F++M  M   KPS VTY  L+  +     V +   +F ++ +S     I T N ++D
Sbjct: 338 DLVFKRMTEMGY-KPSFVTYECLITMYGYCDRVSRAREVFDEMVDSENEKKISTLNAMLD 396

Query: 150 AYGKIGMIREMESVLSRMKSNQI-KPDIITFNLLIDAY 40
           AY   G+  E +++    +S+++ + D  T+ LL  AY
Sbjct: 397 AYCMNGLPMEADALFDNARSSRMFRVDSSTYKLLYKAY 434


>gb|PIN05720.1| hypothetical protein CDL12_21749 [Handroanthus impetiginosus]
          Length = 488

 Score =  487 bits (1254), Expect = e-169
 Identities = 250/299 (83%), Positives = 263/299 (87%)
 Frame = -2

Query: 915 MTSISLPFTSSSLQLSPTLKFTHISTPIHAFTHHPSSPSGIRMCGVSARPQRKPGPKKTH 736
           MT   LPFTSSSL   PT K T    P HA    PSS   IRMCGVS  P++  GPK+T 
Sbjct: 1   MTCTLLPFTSSSLHF-PTRKITQNWIPTHAC---PSSR--IRMCGVSTGPKKISGPKRTR 54

Query: 735 PKRXXXXXSEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSDKWLQC 556
            K      SEAEDLVRL++RNFTDK PLVNTLNKYVKFVRTEHCFLLFEELG+SD+WLQC
Sbjct: 55  KKSSLSSSSEAEDLVRLLMRNFTDKHPLVNTLNKYVKFVRTEHCFLLFEELGKSDEWLQC 114

Query: 555 LEVFRWMQKQKWYIADNGVYSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALIT 376
           LEVFRWMQKQKWYIADNGVYSK+ISVMGKKGQTRMAMWLFSEMRNSGC+PDTSVYNALIT
Sbjct: 115 LEVFRWMQKQKWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALIT 174

Query: 375 AHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKDLDE 196
           AHLHSRDKSKALAKAL YFEKMKGMERCKP+IVTYNILLRAFAQA+NVDQVNALFKDLDE
Sbjct: 175 AHLHSRDKSKALAKALGYFEKMKGMERCKPNIVTYNILLRAFAQARNVDQVNALFKDLDE 234

Query: 195 SIVTPDIYTFNGVMDAYGKIGMIREMESVLSRMKSNQIKPDIITFNLLIDAYGRKQEFD 19
           SIVTPDI+TFNGVMDAYGKIGMIR+ME VLSRMKS QIKPDIITFNLLIDAYGRKQEFD
Sbjct: 235 SIVTPDIFTFNGVMDAYGKIGMIRDMELVLSRMKSKQIKPDIITFNLLIDAYGRKQEFD 293


>ref|XP_022894187.1| pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Olea europaea var. sylvestris]
          Length = 492

 Score =  464 bits (1195), Expect = e-160
 Identities = 232/302 (76%), Positives = 260/302 (86%), Gaps = 3/302 (0%)
 Frame = -2

Query: 915 MTSISLPFTSSSLQLSPTLKFTHISTPIHAFTHHPSS---PSGIRMCGVSARPQRKPGPK 745
           MT  SL F  +SL+LSPT KFT  S+P +AFT HP        + MC V  + +  PGPK
Sbjct: 1   MTLSSLTFPPNSLRLSPTSKFTIFSSPNYAFTQHPCPLPITRPVSMC-VPTQHRNNPGPK 59

Query: 744 KTHPKRXXXXXSEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSDKW 565
           KTH K       EAE+LVR ++RNF +K+PLV TL+KY KF+RTEHCF+LFEELG+ DKW
Sbjct: 60  KTHKKNSSSS--EAEELVRSVLRNFREKKPLVTTLDKYAKFLRTEHCFMLFEELGKDDKW 117

Query: 564 LQCLEVFRWMQKQKWYIADNGVYSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNA 385
           LQCLEVFRWMQKQ+WYIADNGVYSK+ISVMGKKGQTRMAMWLFSEMRNSGC+PDTSVYNA
Sbjct: 118 LQCLEVFRWMQKQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNA 177

Query: 384 LITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKD 205
           LI+AHLHSRDKSKAL+KAL YF+KMKGMERCKPSIVTYNILLRAFAQAKNVDQVN LFKD
Sbjct: 178 LISAHLHSRDKSKALSKALGYFDKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNILFKD 237

Query: 204 LDESIVTPDIYTFNGVMDAYGKIGMIREMESVLSRMKSNQIKPDIITFNLLIDAYGRKQE 25
           L++SIVTPDI+TFNGVMDAYGK GMIREMESVLS MKSNQ+KPDIITFNLLID+YGRKQE
Sbjct: 238 LNDSIVTPDIFTFNGVMDAYGKNGMIREMESVLSMMKSNQLKPDIITFNLLIDSYGRKQE 297

Query: 24  FD 19
           F+
Sbjct: 298 FE 299


>gb|PON33583.1| Pentatricopeptide repeat [Parasponia andersonii]
          Length = 489

 Score =  433 bits (1114), Expect = e-147
 Identities = 223/302 (73%), Positives = 250/302 (82%), Gaps = 7/302 (2%)
 Frame = -2

Query: 906 ISLPFTSSSLQLSPTLKFTHISTPIHAFTH-------HPSSPSGIRMCGVSARPQRKPGP 748
           +SL F S SLQ S    FTH     ++FT        HP  P    +  VS RP+RK   
Sbjct: 1   MSLSF-SQSLQPSK-FPFTHPYAQNYSFTQLWFPSIPHPERPLSTTISCVSTRPRRKSSV 58

Query: 747 KKTHPKRXXXXXSEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSDK 568
           K  +         EA +LVR+++RNF+DK+PLV TLNKYV+FVRTEHCFLLFEELG+SDK
Sbjct: 59  KNDNS--------EALELVRVLMRNFSDKEPLVKTLNKYVRFVRTEHCFLLFEELGKSDK 110

Query: 567 WLQCLEVFRWMQKQKWYIADNGVYSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYN 388
           WLQCLEVFRWMQKQ+WYIADNGVYSK+ISVMGKKGQTRMAMWLFSEMRNSGC+PDTSVYN
Sbjct: 111 WLQCLEVFRWMQKQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYN 170

Query: 387 ALITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFK 208
           ALITAHLHSRDK+KALAKA+ YFEKMKGME C+P+IVTYNILLRAFAQA+NV QVNALFK
Sbjct: 171 ALITAHLHSRDKAKALAKAIGYFEKMKGMEWCQPNIVTYNILLRAFAQARNVQQVNALFK 230

Query: 207 DLDESIVTPDIYTFNGVMDAYGKIGMIREMESVLSRMKSNQIKPDIITFNLLIDAYGRKQ 28
           DLDESIV+PDIYT+NGVMDAYGK GMIREMESVL+ MKSNQ KPDIITFNLLID+YG+KQ
Sbjct: 231 DLDESIVSPDIYTYNGVMDAYGKNGMIREMESVLTMMKSNQTKPDIITFNLLIDSYGKKQ 290

Query: 27  EF 22
           EF
Sbjct: 291 EF 292



 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 42/170 (24%), Positives = 77/170 (45%)
 Frame = -2

Query: 546 FRWMQKQKWYIADNGVYSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALITAHL 367
           F  M+  +W   +   Y+ ++    +    +    LF ++  S   PD   YN ++ A+ 
Sbjct: 193 FEKMKGMEWCQPNIVTYNILLRAFAQARNVQQVNALFKDLDESIVSPDIYTYNGVMDAY- 251

Query: 366 HSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIV 187
               K+  + +  S    MK   + KP I+T+N+L+ ++ + +   ++  +FK L  S  
Sbjct: 252 ---GKNGMIREMESVLTMMKS-NQTKPDIITFNLLIDSYGKKQEFKKMEQVFKSLLRSRE 307

Query: 186 TPDIYTFNGVMDAYGKIGMIREMESVLSRMKSNQIKPDIITFNLLIDAYG 37
            P + TFN ++  YGK   +   E    +M     KP  +T+  LI  YG
Sbjct: 308 RPTLPTFNSMIINYGKARQLERAEHAFGKMTEMGYKPSFVTYESLITMYG 357



 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 46/168 (27%), Positives = 73/168 (43%)
 Frame = -2

Query: 537 MQKQKWYIADNGVYSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALITAHLHSR 358
           M K      D   ++ +I   GKK + +    +F  +  S  +P    +N++I  +    
Sbjct: 266 MMKSNQTKPDIITFNLLIDSYGKKQEFKKMEQVFKSLLRSRERPTLPTFNSMIINY---- 321

Query: 357 DKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPD 178
            K++ L +A   F KM  M   KPS VTY  L+  +     V +   +F  L ES     
Sbjct: 322 GKARQLERAEHAFGKMTEMGY-KPSFVTYESLITMYGLCDCVSRAQDIFDKLIESKEEMK 380

Query: 177 IYTFNGVMDAYGKIGMIREMESVLSRMKSNQIKPDIITFNLLIDAYGR 34
           + T N ++D Y   G+  E   +    KS  + PD  T+ LL  AY +
Sbjct: 381 VSTLNAMLDVYCMNGLPTEAHKLFESAKSIGVAPDSSTYKLLYKAYSK 428


>gb|KZV37620.1| pentatricopeptide repeat-containing protein chloroplastic
           [Dorcoceras hygrometricum]
          Length = 497

 Score =  433 bits (1114), Expect = e-147
 Identities = 221/304 (72%), Positives = 250/304 (82%)
 Frame = -2

Query: 930 LKFTKMTSISLPFTSSSLQLSPTLKFTHISTPIHAFTHHPSSPSGIRMCGVSARPQRKPG 751
           +K T+MT ++ P   S + LSPT     +  P+          + + MC +S+RP+R P 
Sbjct: 1   MKITEMT-LTYPSFWSPVYLSPTRTLI-LREPV----------ATVHMCNISSRPKRTP- 47

Query: 750 PKKTHPKRXXXXXSEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSD 571
                 KR     SE ++LVR I++NFTDKQPLVNTLNKYV+FVR EHCF LFEELG +D
Sbjct: 48  ------KRSVSQSSEEKELVRSIMKNFTDKQPLVNTLNKYVRFVRMEHCFFLFEELGNND 101

Query: 570 KWLQCLEVFRWMQKQKWYIADNGVYSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVY 391
            WLQCLEVFRWMQKQ+WYIADNGVYSK+ISVMGKKGQTRMAMWLFSEMR+SGCKPD+SVY
Sbjct: 102 NWLQCLEVFRWMQKQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRSSGCKPDSSVY 161

Query: 390 NALITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALF 211
           N+LITAHLHSRDKSKALAKA  YFEKMKGMERCKP++VTYNILLRAFAQA+NVDQV ALF
Sbjct: 162 NSLITAHLHSRDKSKALAKAFMYFEKMKGMERCKPTVVTYNILLRAFAQARNVDQVTALF 221

Query: 210 KDLDESIVTPDIYTFNGVMDAYGKIGMIREMESVLSRMKSNQIKPDIITFNLLIDAYGRK 31
           KDL ES VTPDI+TFNGVMDAYGK GMIREME VLSRMKSNQIKPDIIT+NLLID+YGRK
Sbjct: 222 KDLSESTVTPDIFTFNGVMDAYGKNGMIREMELVLSRMKSNQIKPDIITYNLLIDSYGRK 281

Query: 30  QEFD 19
           QEFD
Sbjct: 282 QEFD 285


>gb|PON36814.1| Pentatricopeptide repeat [Trema orientalis]
          Length = 489

 Score =  432 bits (1110), Expect = e-147
 Identities = 221/303 (72%), Positives = 250/303 (82%), Gaps = 7/303 (2%)
 Frame = -2

Query: 906 ISLPFTSSSLQLSPTLKFTHISTPIHAFTH-------HPSSPSGIRMCGVSARPQRKPGP 748
           +SL F S SLQ S    FTH     ++FT        HP  P    +  +S RP+RK   
Sbjct: 1   MSLSF-SQSLQPSK-FPFTHPFAQNYSFTQLWFPSIPHPERPLSTTISCISTRPRRKSSV 58

Query: 747 KKTHPKRXXXXXSEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSDK 568
           K  +         EA +LVR++VRNF+DK+PLV TLNKYV+FVRTEHCFLLFEELG+SDK
Sbjct: 59  KNDNS--------EALELVRVLVRNFSDKEPLVKTLNKYVRFVRTEHCFLLFEELGKSDK 110

Query: 567 WLQCLEVFRWMQKQKWYIADNGVYSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYN 388
           WLQCLEVFRWMQKQ+WYI DNGVYSK+ISVMGKKGQTRMAMWLFSEMRNSGC+PDTSVYN
Sbjct: 111 WLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYN 170

Query: 387 ALITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFK 208
           AL+TAHLHSRDK+KALAKA+ YFEKMKGME C+P+IVTYNILLRAFAQA+NV QVNALFK
Sbjct: 171 ALVTAHLHSRDKAKALAKAIGYFEKMKGMEWCQPNIVTYNILLRAFAQARNVQQVNALFK 230

Query: 207 DLDESIVTPDIYTFNGVMDAYGKIGMIREMESVLSRMKSNQIKPDIITFNLLIDAYGRKQ 28
           DLDESIV+PDIYT+NGVMDAYGK GMIREMESVL+ MKSNQ KPDIITFNLLID+YG+KQ
Sbjct: 231 DLDESIVSPDIYTYNGVMDAYGKNGMIREMESVLTIMKSNQTKPDIITFNLLIDSYGKKQ 290

Query: 27  EFD 19
           EF+
Sbjct: 291 EFE 293



 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 42/170 (24%), Positives = 78/170 (45%)
 Frame = -2

Query: 546 FRWMQKQKWYIADNGVYSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALITAHL 367
           F  M+  +W   +   Y+ ++    +    +    LF ++  S   PD   YN ++ A+ 
Sbjct: 193 FEKMKGMEWCQPNIVTYNILLRAFAQARNVQQVNALFKDLDESIVSPDIYTYNGVMDAY- 251

Query: 366 HSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIV 187
               K+  + +  S    MK   + KP I+T+N+L+ ++ + +  +++  +FK L  S  
Sbjct: 252 ---GKNGMIREMESVLTIMKS-NQTKPDIITFNLLIDSYGKKQEFEKMEQVFKSLLRSRE 307

Query: 186 TPDIYTFNGVMDAYGKIGMIREMESVLSRMKSNQIKPDIITFNLLIDAYG 37
            P + TFN ++  YGK   +   E    +M     KP  +T+  LI  YG
Sbjct: 308 RPTLPTFNSMIINYGKARQLERAEHAFGKMTEMGYKPSFVTYESLITMYG 357



 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 31/184 (16%)
 Frame = -2

Query: 498 YSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALITAH----------------L 367
           Y+ V+   GK G  R    + + M+++  KPD   +N LI ++                L
Sbjct: 244 YNGVMDAYGKNGMIREMESVLTIMKSNQTKPDIITFNLLIDSYGKKQEFEKMEQVFKSLL 303

Query: 366 HSRD---------------KSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNV 232
            SR+               K++ L +A   F KM  M   KPS VTY  L+  +     V
Sbjct: 304 RSRERPTLPTFNSMIINYGKARQLERAEHAFGKMTEMGY-KPSFVTYESLITMYGLCDCV 362

Query: 231 DQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREMESVLSRMKSNQIKPDIITFNLL 52
            +   +F  L ES     + T N ++D Y   G+  E   +    KS  + PD  T+ LL
Sbjct: 363 SRAQDIFDKLIESKKEMKVSTLNAMLDVYCMNGLPTEAHKLFESAKSIGVAPDSSTYKLL 422

Query: 51  IDAY 40
             AY
Sbjct: 423 YKAY 426


>ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Vitis vinifera]
 emb|CBI21486.3| unnamed protein product, partial [Vitis vinifera]
          Length = 489

 Score =  430 bits (1105), Expect = e-146
 Identities = 217/291 (74%), Positives = 248/291 (85%), Gaps = 2/291 (0%)
 Frame = -2

Query: 885 SSLQLSPTLKFTHISTPIHAFT--HHPSSPSGIRMCGVSARPQRKPGPKKTHPKRXXXXX 712
           SS  LSPT  FT  S+  +  T  H P  PS   +  VS RP+RKPGPK           
Sbjct: 16  SSSTLSPT--FTLPSSRFYKPTRLHLPPRPSTTVVSCVSTRPRRKPGPKPDKS------- 66

Query: 711 SEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSDKWLQCLEVFRWMQ 532
            E E+LVR++++NF  ++PL++TLNKYVK +RTEHCF LFEELG++DKWLQCLEVFRWMQ
Sbjct: 67  -EVEELVRVLMKNFGGERPLISTLNKYVKVIRTEHCFRLFEELGKTDKWLQCLEVFRWMQ 125

Query: 531 KQKWYIADNGVYSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALITAHLHSRDK 352
           KQ+WYIADNGVYSK+ISVMGKKGQTRMAMWLFSEMRNSGC+PDTSVYNALITAHLHSRDK
Sbjct: 126 KQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSRDK 185

Query: 351 SKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIY 172
           SKAL KAL YF+KMKGMERCKP+IVTYNILLRAFAQA+NV+Q NALFK+L+ESIV+PDI+
Sbjct: 186 SKALIKALGYFDKMKGMERCKPNIVTYNILLRAFAQAQNVNQANALFKELNESIVSPDIF 245

Query: 171 TFNGVMDAYGKIGMIREMESVLSRMKSNQIKPDIITFNLLIDAYGRKQEFD 19
           TFNGVMDAYGK GMI+EMESVLSRMKSNQ KPDIITFN+LID+YGR+QEFD
Sbjct: 246 TFNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNVLIDSYGRRQEFD 296



 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 34/155 (21%), Positives = 77/155 (49%), Gaps = 2/155 (1%)
 Frame = -2

Query: 498 YSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALITAHLHSR--DKSKALAKALS 325
           ++ V+   GK G  +    + S M+++ CKPD   +N LI ++   +  DK + + K+L 
Sbjct: 247 FNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNVLIDSYGRRQEFDKMEQVFKSL- 305

Query: 324 YFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAY 145
               ++  E  KP++ T+N ++  + +A+  ++   +FK + +    P+  T+  ++  Y
Sbjct: 306 ----LRSKE--KPTLPTFNSMITNYGKARLKEKAENVFKKMTDMGYAPNFITYESLIMMY 359

Query: 144 GKIGMIREMESVLSRMKSNQIKPDIITFNLLIDAY 40
           G    I     +   M +++ +  + T N +++ Y
Sbjct: 360 GFCDCISRAREIFDEMMASKKEMKVSTLNAMLEVY 394


>ref|XP_015867273.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Ziziphus jujuba]
          Length = 487

 Score =  429 bits (1104), Expect = e-146
 Identities = 219/302 (72%), Positives = 251/302 (83%), Gaps = 8/302 (2%)
 Frame = -2

Query: 900 LPFTSSSLQLSP-TLKFTHISTPIHAFTHHPSSPSGI-------RMCGVSARPQRKPGPK 745
           +P + SS  L P T  FT  ST  + F   P  P+ +       R+  VS RP+RK   K
Sbjct: 1   MPLSLSSHSLHPSTFLFTRPSTQNYNFAK-PWLPNSLLLERTITRISCVSTRPKRKSASK 59

Query: 744 KTHPKRXXXXXSEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSDKW 565
                      SEAE+LVRL++R+F+DK+PL+ TLNKYVK VRTEHCFLLFEELG+SDKW
Sbjct: 60  --------IESSEAEELVRLLMRSFSDKEPLLKTLNKYVKIVRTEHCFLLFEELGKSDKW 111

Query: 564 LQCLEVFRWMQKQKWYIADNGVYSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNA 385
           LQCLEVFRWMQKQ+WYIADNG+YSK+ISVMGK GQTRMAMWLFSEMRNSGC+PDTSVYNA
Sbjct: 112 LQCLEVFRWMQKQRWYIADNGIYSKLISVMGKNGQTRMAMWLFSEMRNSGCRPDTSVYNA 171

Query: 384 LITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKD 205
           L+TAHLHS+DK+KAL KAL YFEKMKGMERCKP++VTYNILLRA+AQA+NV+QVNAL KD
Sbjct: 172 LMTAHLHSKDKTKALCKALGYFEKMKGMERCKPNVVTYNILLRAYAQARNVEQVNALLKD 231

Query: 204 LDESIVTPDIYTFNGVMDAYGKIGMIREMESVLSRMKSNQIKPDIITFNLLIDAYGRKQE 25
           LDESIV+PDIYT+NGVMDAYGK GMIREMESVLSRMKSNQ KPDIITFNLLID+YG++QE
Sbjct: 232 LDESIVSPDIYTYNGVMDAYGKNGMIREMESVLSRMKSNQCKPDIITFNLLIDSYGKRQE 291

Query: 24  FD 19
           FD
Sbjct: 292 FD 293


>ref|XP_008364127.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Malus domestica]
          Length = 486

 Score =  424 bits (1089), Expect = e-144
 Identities = 212/302 (70%), Positives = 252/302 (83%), Gaps = 6/302 (1%)
 Frame = -2

Query: 906 ISLPFTSSSLQLSPTLKFTHISTPIHAFTH----HP--SSPSGIRMCGVSARPQRKPGPK 745
           +SL  + +SLQ S T +FT  S+  ++FT     HP        R+  VS RP+R PGPK
Sbjct: 1   MSLTISPNSLQPS-TFQFTFHSSQNYSFTQPWLPHPLIRKRPRTRISCVSTRPKRNPGPK 59

Query: 744 KTHPKRXXXXXSEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSDKW 565
              P        E  ++VR ++R+F+DK+PL+ TLNKYVK VRTEHCF+LFEELG++DKW
Sbjct: 60  TEDP--------EVREVVRTLMRSFSDKEPLLKTLNKYVKIVRTEHCFMLFEELGKTDKW 111

Query: 564 LQCLEVFRWMQKQKWYIADNGVYSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNA 385
           LQCLEVFRWMQ+Q+WY+ADNGVYSK+ISVMGKKGQTRMAMWLFSEMRNSGC+PDTSVYNA
Sbjct: 112 LQCLEVFRWMQRQRWYVADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNA 171

Query: 384 LITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKD 205
           LI+AHL+S+DK+KAL KAL YF KMKGMERC+PSIVTYNILLRAFAQ++NV++VNALFKD
Sbjct: 172 LISAHLNSKDKAKALDKALGYFNKMKGMERCQPSIVTYNILLRAFAQSRNVEKVNALFKD 231

Query: 204 LDESIVTPDIYTFNGVMDAYGKIGMIREMESVLSRMKSNQIKPDIITFNLLIDAYGRKQE 25
           LDES+ +PDIYT+NGVMDAYGK G IREMESVLSRMKSNQ KPDIITFNLLID+YG+KQ+
Sbjct: 232 LDESVASPDIYTYNGVMDAYGKNGNIREMESVLSRMKSNQCKPDIITFNLLIDSYGKKQQ 291

Query: 24  FD 19
           FD
Sbjct: 292 FD 293



 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 37/155 (23%), Positives = 77/155 (49%), Gaps = 2/155 (1%)
 Frame = -2

Query: 498 YSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALITAHLHSR--DKSKALAKALS 325
           Y+ V+   GK G  R    + S M+++ CKPD   +N LI ++   +  DK + + K+L 
Sbjct: 244 YNGVMDAYGKNGNIREMESVLSRMKSNQCKPDIITFNLLIDSYGKKQQFDKMEQVFKSL- 302

Query: 324 YFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAY 145
               ++  E  KP++ T+N ++  + +A+ +++   +F  + +   TP   T+  ++  Y
Sbjct: 303 ----LRSKE--KPTLPTFNSMIINYGKARLMEKAEHVFXKMTDMKYTPSFITYESLIMMY 356

Query: 144 GKIGMIREMESVLSRMKSNQIKPDIITFNLLIDAY 40
           G    + +   V  R+  +  +  + T N ++D Y
Sbjct: 357 GFCDCVSKARDVFERLADSGRELKVSTLNAMLDVY 391


>ref|XP_016441969.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Nicotiana tabacum]
          Length = 488

 Score =  424 bits (1089), Expect = e-144
 Identities = 214/301 (71%), Positives = 247/301 (82%), Gaps = 6/301 (1%)
 Frame = -2

Query: 906 ISLPFTSSSLQLSPTLKFTHISTPIHAFTHHP------SSPSGIRMCGVSARPQRKPGPK 745
           ++LPF+ S     P+L  T  +      TH+P        P    +  VS RP RK G  
Sbjct: 1   MTLPFSYSGSVQFPSLTTTTPTFQQPRLTHNPWLNFTYKRPVFYLIRCVSTRPGRKSGTT 60

Query: 744 KTHPKRXXXXXSEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSDKW 565
            T          EA++LV L++RNF+DK+PLV+TLNKYVKFVRTEHCFLLFEELG++D W
Sbjct: 61  STRGSS------EAQELVTLLMRNFSDKKPLVSTLNKYVKFVRTEHCFLLFEELGKTDNW 114

Query: 564 LQCLEVFRWMQKQKWYIADNGVYSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNA 385
           LQCLEVFRWMQKQ+WYIADNGVYSK+ISVMGKKGQ RMAMWLFSEMRNSGC+PDTSVYNA
Sbjct: 115 LQCLEVFRWMQKQRWYIADNGVYSKLISVMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNA 174

Query: 384 LITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKD 205
           +I+AHLHSRDKSKALAKA+ YFEKMKGMERC PSIVTYNILLRAFAQAKNV+QV+AL KD
Sbjct: 175 VISAHLHSRDKSKALAKAMGYFEKMKGMERCNPSIVTYNILLRAFAQAKNVEQVDALMKD 234

Query: 204 LDESIVTPDIYTFNGVMDAYGKIGMIREMESVLSRMKSNQIKPDIITFNLLIDAYGRKQE 25
           L+ESIVTPDI+TFNG+MDAYGK GMI+EME VLSRMKSN++KPDIITFN+LID+YG+KQE
Sbjct: 235 LEESIVTPDIFTFNGLMDAYGKNGMIKEMEHVLSRMKSNELKPDIITFNILIDSYGKKQE 294

Query: 24  F 22
           F
Sbjct: 295 F 295


>gb|PRQ38065.1| putative pentatricopeptide [Rosa chinensis]
          Length = 298

 Score =  416 bits (1068), Expect = e-143
 Identities = 200/271 (73%), Positives = 236/271 (87%), Gaps = 3/271 (1%)
 Frame = -2

Query: 822 THHPSSP---SGIRMCGVSARPQRKPGPKKTHPKRXXXXXSEAEDLVRLIVRNFTDKQPL 652
           THHP  P     +R+  +S R +RKPG +K+          EA + VR+++R+F+DK+PL
Sbjct: 23  THHPCLPLQKQPLRVSCISTRFRRKPGTRKSDNS-------EAHETVRMLIRSFSDKEPL 75

Query: 651 VNTLNKYVKFVRTEHCFLLFEELGRSDKWLQCLEVFRWMQKQKWYIADNGVYSKVISVMG 472
           + +LNKYVK VRTEHCFLLFEELG+SDKWLQCLEVFRWMQKQ+WY+ADNGVYSK+ISVMG
Sbjct: 76  LKSLNKYVKIVRTEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYVADNGVYSKLISVMG 135

Query: 471 KKGQTRMAMWLFSEMRNSGCKPDTSVYNALITAHLHSRDKSKALAKALSYFEKMKGMERC 292
           KKGQTRMAMWLFSEMRNSGC+PDTSVYNALI+AHL+ +DK KAL KAL YF KMKGMERC
Sbjct: 136 KKGQTRMAMWLFSEMRNSGCRPDTSVYNALISAHLNCKDKGKALEKALVYFNKMKGMERC 195

Query: 291 KPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREMES 112
           +P+IVTYNILLRAFAQ++NV++VN+LFKDLDESI +PDIYT+NGVMDAYGK GMIR+MES
Sbjct: 196 QPNIVTYNILLRAFAQSRNVEKVNSLFKDLDESIASPDIYTYNGVMDAYGKNGMIRDMES 255

Query: 111 VLSRMKSNQIKPDIITFNLLIDAYGRKQEFD 19
           VLSRMKSNQ KPD ITFNLLID+YG+KQ+FD
Sbjct: 256 VLSRMKSNQCKPDTITFNLLIDSYGKKQQFD 286


>ref|XP_011021906.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Populus euphratica]
          Length = 487

 Score =  422 bits (1085), Expect = e-143
 Identities = 211/294 (71%), Positives = 250/294 (85%), Gaps = 6/294 (2%)
 Frame = -2

Query: 882 SLQLSP--TLKFTH----ISTPIHAFTHHPSSPSGIRMCGVSARPQRKPGPKKTHPKRXX 721
           SLQLS   +  FTH    I  P  +   HP   S  ++  VS RP+++P P  T  K   
Sbjct: 6   SLQLSTLHSSSFTHSVSLIYNPTPSLPWHPMKYSPTQVSCVSTRPKKRPVP--TDDKS-- 61

Query: 720 XXXSEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSDKWLQCLEVFR 541
               EA++LVR++VR+F+DKQPLV TLNKYVK +RTEHCF+LFEELG++D WLQCLEVFR
Sbjct: 62  ----EAQELVRVLVRSFSDKQPLVKTLNKYVKVMRTEHCFMLFEELGKTDNWLQCLEVFR 117

Query: 540 WMQKQKWYIADNGVYSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALITAHLHS 361
           WMQKQ+WY+ADNG YSK+ISVMGKKGQTRMAMWLFSEMRNSGC+PDTSVYNALITAHLHS
Sbjct: 118 WMQKQRWYVADNGCYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHS 177

Query: 360 RDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTP 181
           +DK+KAL KAL+YFEKMKG+ERC+P++VTYNILLRAFAQA+NV+QVNALFKDL+ESIV+P
Sbjct: 178 KDKAKALTKALAYFEKMKGIERCQPNVVTYNILLRAFAQARNVNQVNALFKDLEESIVSP 237

Query: 180 DIYTFNGVMDAYGKIGMIREMESVLSRMKSNQIKPDIITFNLLIDAYGRKQEFD 19
           DIYT+NGV+DAYGK GMIREMESVLSRMK +Q KPDIITFNLLID+YG+KQ+F+
Sbjct: 238 DIYTYNGVLDAYGKNGMIREMESVLSRMKIDQCKPDIITFNLLIDSYGKKQDFE 291



 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 6/159 (3%)
 Frame = -2

Query: 498 YSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALITAHLHSRDKSKALAKALSYF 319
           Y+ V+   GK G  R    + S M+   CKPD   +N LI ++   +D           F
Sbjct: 242 YNGVLDAYGKNGMIREMESVLSRMKIDQCKPDIITFNLLIDSYGKKQD-----------F 290

Query: 318 EKMKGMERC------KPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGV 157
           EKM+ + +       KP++ T+N ++  + +A+  D+  ++FK + +   TP   TF  +
Sbjct: 291 EKMEQVFKSLLRSKEKPTLPTFNSMIVNYGKARLKDKAESVFKKMADMRYTPSFITFESL 350

Query: 156 MDAYGKIGMIREMESVLSRMKSNQIKPDIITFNLLIDAY 40
           +  YG    + +   +   M ++     + T N +++ Y
Sbjct: 351 IMMYGICDCVSKARDIFDDMVASGKVVKVSTLNAVLNVY 389


>ref|XP_010245873.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Nelumbo nucifera]
          Length = 491

 Score =  422 bits (1085), Expect = e-143
 Identities = 215/312 (68%), Positives = 248/312 (79%), Gaps = 4/312 (1%)
 Frame = -2

Query: 942 TAIPLKFTKMTSISLPFTSSSL----QLSPTLKFTHISTPIHAFTHHPSSPSGIRMCGVS 775
           TA+ L+ + +T   L F  SS+    Q  P         PIH            R+  ++
Sbjct: 6   TALSLQLSSVTPFPLQFRESSISKLKQAYPCPPQRFSLKPIH------------RISCIA 53

Query: 774 ARPQRKPGPKKTHPKRXXXXXSEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLL 595
            RP+++   K            EA +LVR ++RNF+D++PLV+TLNKYVK VRTEHCFLL
Sbjct: 54  TRPKKRFASKSDKS--------EAGELVRFLLRNFSDQKPLVSTLNKYVKLVRTEHCFLL 105

Query: 594 FEELGRSDKWLQCLEVFRWMQKQKWYIADNGVYSKVISVMGKKGQTRMAMWLFSEMRNSG 415
           FEELG+ D+WLQCLEVFRWMQKQ+WYIADNGVYSK+ISVMGKKGQTRMAMWLFSEMRNSG
Sbjct: 106 FEELGKRDRWLQCLEVFRWMQKQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSG 165

Query: 414 CKPDTSVYNALITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKN 235
           C+PDTSVYNALITAHLHSRDKSKALAKAL YFEKMKG+ERCKP+IVTYNILLRAFAQA+N
Sbjct: 166 CRPDTSVYNALITAHLHSRDKSKALAKALGYFEKMKGIERCKPNIVTYNILLRAFAQARN 225

Query: 234 VDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREMESVLSRMKSNQIKPDIITFNL 55
           VDQVNALFKDL+ S V+PD+YTFNGVMDAYGK GMIREMESVLSRMKSNQ KPD+ITFNL
Sbjct: 226 VDQVNALFKDLENSSVSPDVYTFNGVMDAYGKNGMIREMESVLSRMKSNQCKPDVITFNL 285

Query: 54  LIDAYGRKQEFD 19
           LID+YG++Q FD
Sbjct: 286 LIDSYGKRQAFD 297



 Score = 61.6 bits (148), Expect = 8e-07
 Identities = 35/153 (22%), Positives = 71/153 (46%)
 Frame = -2

Query: 498 YSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALITAHLHSRDKSKALAKALSYF 319
           ++ V+   GK G  R    + S M+++ CKPD   +N LI ++     K +A  K    F
Sbjct: 248 FNGVMDAYGKNGMIREMESVLSRMKSNQCKPDVITFNLLIDSY----GKRQAFDKMEQVF 303

Query: 318 EKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGK 139
           + +    + KP++ T+N ++  + +A+  ++  ++FK + +   TP   T   ++  YG 
Sbjct: 304 KSLL-RSKDKPTLPTFNSMIVNYGKARLREKAESIFKKMTDMGYTPSYVTNESLITTYGL 362

Query: 138 IGMIREMESVLSRMKSNQIKPDIITFNLLIDAY 40
              +     +   +  N     + T N ++D Y
Sbjct: 363 CDCVSRAREIFDGIMENSKDIQVSTVNCMLDVY 395


>ref|XP_023905919.1| pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Quercus suber]
 ref|XP_023905920.1| pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Quercus suber]
 ref|XP_023905921.1| pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Quercus suber]
 ref|XP_023905922.1| pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Quercus suber]
          Length = 509

 Score =  422 bits (1085), Expect = e-143
 Identities = 215/312 (68%), Positives = 253/312 (81%), Gaps = 10/312 (3%)
 Frame = -2

Query: 924 FTKMTSISLPFTSSSLQLSPTLKFTH--------ISTPIHAFTHHPSSPSGIRMCGVSAR 769
           F  ++S SL  +SSS  L  +L +TH        +S P  +  + P +    R+   S R
Sbjct: 2   FQNLSSHSLQPSSSSFTLHSSLYYTHTLIFTQPCLSLPNRSLRYRPMT----RISCASTR 57

Query: 768 PQRKPG--PKKTHPKRXXXXXSEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLL 595
           P+R PG  P K+          EAE+LVR+++RN  + +PL+ TLNKYVK VRTEHCFLL
Sbjct: 58  PKRNPGLMPDKS----------EAEELVRVMMRNMNEIEPLLKTLNKYVKVVRTEHCFLL 107

Query: 594 FEELGRSDKWLQCLEVFRWMQKQKWYIADNGVYSKVISVMGKKGQTRMAMWLFSEMRNSG 415
           FE+LG+SDKWLQCLEVFRWMQKQ+WY+ADNGVYSK+ISVMGKKGQTRMAMWLFSEMRNSG
Sbjct: 108 FEQLGKSDKWLQCLEVFRWMQKQRWYVADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSG 167

Query: 414 CKPDTSVYNALITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKN 235
           C+ DTSVYNALITAHLHSRDK+KAL KA+ YFEKMKG+E CKPS+VTYNILLRAFAQA+N
Sbjct: 168 CRADTSVYNALITAHLHSRDKAKALDKAIGYFEKMKGIEWCKPSVVTYNILLRAFAQARN 227

Query: 234 VDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREMESVLSRMKSNQIKPDIITFNL 55
           V++VNALFKDLDESI++PDIYT+NGVMDAYGK GMIREMESVLSRMK NQ KPDIITFNL
Sbjct: 228 VERVNALFKDLDESIISPDIYTYNGVMDAYGKNGMIREMESVLSRMKINQCKPDIITFNL 287

Query: 54  LIDAYGRKQEFD 19
           LID+YG+KQEF+
Sbjct: 288 LIDSYGKKQEFN 299


>ref|XP_010681106.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Beta vulgaris subsp. vulgaris]
 ref|XP_010681107.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Beta vulgaris subsp. vulgaris]
 ref|XP_019105795.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Beta vulgaris subsp. vulgaris]
 ref|XP_019105796.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Beta vulgaris subsp. vulgaris]
 ref|XP_019105797.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Beta vulgaris subsp. vulgaris]
 ref|XP_019105798.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Beta vulgaris subsp. vulgaris]
 gb|KMT08673.1| hypothetical protein BVRB_6g139490 [Beta vulgaris subsp. vulgaris]
          Length = 487

 Score =  421 bits (1082), Expect = e-143
 Identities = 203/259 (78%), Positives = 233/259 (89%)
 Frame = -2

Query: 795 IRMCGVSARPQRKPGPKKTHPKRXXXXXSEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVR 616
           I++  +S+RP ++   K  +         EA++LVRLI+RNF+DK+PLV+TLNKYVK +R
Sbjct: 49  IKITCISSRPNKRSSSKSVNS--------EAQELVRLILRNFSDKEPLVSTLNKYVKILR 100

Query: 615 TEHCFLLFEELGRSDKWLQCLEVFRWMQKQKWYIADNGVYSKVISVMGKKGQTRMAMWLF 436
           TEHCF+LFE+LG+SDKWLQCLEVFRWMQKQ+WYIADNGVYSK+ISVMGK+GQTRMAMWLF
Sbjct: 101 TEHCFMLFEDLGKSDKWLQCLEVFRWMQKQRWYIADNGVYSKLISVMGKRGQTRMAMWLF 160

Query: 435 SEMRNSGCKPDTSVYNALITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLR 256
           SEMRNSGC+PDTSVYNALITAHLHSRDKSK L KAL Y +KMKG+ERCKPSIVTYNILLR
Sbjct: 161 SEMRNSGCRPDTSVYNALITAHLHSRDKSKGLEKALGYLDKMKGIERCKPSIVTYNILLR 220

Query: 255 AFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREMESVLSRMKSNQIKP 76
           AFAQA+NV+QVNALFKDL+ESIV+PDIYTFNGVMDAYGK GMIREME VLSRMK NQ KP
Sbjct: 221 AFAQARNVNQVNALFKDLEESIVSPDIYTFNGVMDAYGKNGMIREMEDVLSRMKINQCKP 280

Query: 75  DIITFNLLIDAYGRKQEFD 19
           DIITFNLLIDAYG++QEF+
Sbjct: 281 DIITFNLLIDAYGKRQEFE 299


>gb|PNT35567.1| hypothetical protein POPTR_005G082400v3 [Populus trichocarpa]
          Length = 487

 Score =  420 bits (1079), Expect = e-142
 Identities = 209/294 (71%), Positives = 250/294 (85%), Gaps = 6/294 (2%)
 Frame = -2

Query: 882 SLQLSP--TLKFTH----ISTPIHAFTHHPSSPSGIRMCGVSARPQRKPGPKKTHPKRXX 721
           SLQLS   +  FTH    I  P  +   HP   S  ++  VS RP+++P P  T  K   
Sbjct: 6   SLQLSTLHSSSFTHNVSLIYNPTPSLPWHPMKYSPTQVSCVSTRPKKRPVP--TDEKS-- 61

Query: 720 XXXSEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSDKWLQCLEVFR 541
               EA++LVR++VR+F+DKQPLV TLNKYVK +RTEHCF+LFEELG++DKWLQCLEVFR
Sbjct: 62  ----EAQELVRVLVRSFSDKQPLVKTLNKYVKVMRTEHCFMLFEELGKTDKWLQCLEVFR 117

Query: 540 WMQKQKWYIADNGVYSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALITAHLHS 361
           WMQKQ+WY+ADNG YSK+ISVMGKKGQTRMAMWLFSEMRNSGC+PDTSVYNALITAHLHS
Sbjct: 118 WMQKQRWYVADNGCYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHS 177

Query: 360 RDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTP 181
           +DK+K+L KAL+YFEKMK +ERC+P++VTYNI+LRAFAQA+NV+QVNALFKDL+ESIV+P
Sbjct: 178 KDKAKSLTKALAYFEKMKSIERCQPNVVTYNIILRAFAQARNVNQVNALFKDLEESIVSP 237

Query: 180 DIYTFNGVMDAYGKIGMIREMESVLSRMKSNQIKPDIITFNLLIDAYGRKQEFD 19
           DIYT+NGV+DAYGK GMIREMESVLSRMK +Q KPDIITFNLLID+YG+KQ+F+
Sbjct: 238 DIYTYNGVLDAYGKNGMIREMESVLSRMKIDQCKPDIITFNLLIDSYGKKQDFE 291



 Score = 77.0 bits (188), Expect = 6e-12
 Identities = 43/154 (27%), Positives = 79/154 (51%)
 Frame = -2

Query: 498 YSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALITAHLHSRDKSKALAKALSYF 319
           Y+ ++    +         LF ++  S   PD   YN ++ A+     K+  + +  S  
Sbjct: 207 YNIILRAFAQARNVNQVNALFKDLEESIVSPDIYTYNGVLDAY----GKNGMIREMESVL 262

Query: 318 EKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAYGK 139
            +MK +++CKP I+T+N+L+ ++ + ++ +++  +FK L  S   P + TFN ++  YGK
Sbjct: 263 SRMK-IDQCKPDIITFNLLIDSYGKKQDFEKMEQVFKSLLRSKEKPTLPTFNSMIVNYGK 321

Query: 138 IGMIREMESVLSRMKSNQIKPDIITFNLLIDAYG 37
             +  + ESV  +M   +  P  ITF  LI  YG
Sbjct: 322 ARLKDKAESVFKKMADMRYTPSFITFESLIMMYG 355



 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 6/159 (3%)
 Frame = -2

Query: 498 YSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALITAHLHSRDKSKALAKALSYF 319
           Y+ V+   GK G  R    + S M+   CKPD   +N LI ++   +D           F
Sbjct: 242 YNGVLDAYGKNGMIREMESVLSRMKIDQCKPDIITFNLLIDSYGKKQD-----------F 290

Query: 318 EKMKGMERC------KPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGV 157
           EKM+ + +       KP++ T+N ++  + +A+  D+  ++FK + +   TP   TF  +
Sbjct: 291 EKMEQVFKSLLRSKEKPTLPTFNSMIVNYGKARLKDKAESVFKKMADMRYTPSFITFESL 350

Query: 156 MDAYGKIGMIREMESVLSRMKSNQIKPDIITFNLLIDAY 40
           +  YG    + +   +   M  +  +  + T N +++ Y
Sbjct: 351 IMMYGICDCVSKARDIFDDMVESGKEVKVSTLNAVLNVY 389


>ref|XP_009345820.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Pyrus x bretschneideri]
          Length = 486

 Score =  419 bits (1078), Expect = e-142
 Identities = 212/303 (69%), Positives = 250/303 (82%), Gaps = 7/303 (2%)
 Frame = -2

Query: 906 ISLPFTSSSLQLSPTLKFTHISTPIHAFTH----HP---SSPSGIRMCGVSARPQRKPGP 748
           +SL  +  SLQ S T +FT  S+  ++FT     HP     P     C VS RP+R PGP
Sbjct: 1   MSLTISPHSLQPS-TFQFTFHSSQNYSFTQPWLPHPLIRKRPRTQISC-VSTRPKRNPGP 58

Query: 747 KKTHPKRXXXXXSEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSDK 568
           +   P        E  ++VR ++R+F+DK+PL+ TLNKYVK VRTEHCF+LFEELG++DK
Sbjct: 59  RTEDP--------EVREVVRTLMRSFSDKEPLLKTLNKYVKIVRTEHCFMLFEELGKTDK 110

Query: 567 WLQCLEVFRWMQKQKWYIADNGVYSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYN 388
           WLQCLEVFRWMQ+Q+WY+ADNGVYSK+ISVMGKKGQTRMAMWLFSEMRNSGC+PDTSVYN
Sbjct: 111 WLQCLEVFRWMQRQRWYVADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYN 170

Query: 387 ALITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFK 208
           ALI+AHL+S+DK KAL KAL YF KMKGMERC+PSIVTYNILLRAFAQ++NV++VNALFK
Sbjct: 171 ALISAHLNSKDKVKALDKALGYFNKMKGMERCQPSIVTYNILLRAFAQSRNVEKVNALFK 230

Query: 207 DLDESIVTPDIYTFNGVMDAYGKIGMIREMESVLSRMKSNQIKPDIITFNLLIDAYGRKQ 28
           DLDES+ +PDIYT+NGVMDAYGK G IREMESVLSRMKSNQ KPDIITFNLLID+YG+KQ
Sbjct: 231 DLDESVASPDIYTYNGVMDAYGKNGNIREMESVLSRMKSNQCKPDIITFNLLIDSYGKKQ 290

Query: 27  EFD 19
           +FD
Sbjct: 291 QFD 293



 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 37/155 (23%), Positives = 78/155 (50%), Gaps = 2/155 (1%)
 Frame = -2

Query: 498 YSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNALITAHLHSR--DKSKALAKALS 325
           Y+ V+   GK G  R    + S M+++ CKPD   +N LI ++   +  DK + + K+L 
Sbjct: 244 YNGVMDAYGKNGNIREMESVLSRMKSNQCKPDIITFNLLIDSYGKKQQFDKMEQVFKSL- 302

Query: 324 YFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKDLDESIVTPDIYTFNGVMDAY 145
               ++  E  KP++ T+N ++  + +A+ +++   +F+ + +   TP   T+  ++  Y
Sbjct: 303 ----LRSKE--KPTLPTFNSMIINYGKARLMEKAEHVFQKMTDMKYTPSFITYESLIMMY 356

Query: 144 GKIGMIREMESVLSRMKSNQIKPDIITFNLLIDAY 40
           G    + +   V  R+  +  +  + T N ++D Y
Sbjct: 357 GFCDCVSKARDVFDRLADSGRELKVSTLNAMLDVY 391


>ref|XP_019224228.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Nicotiana attenuata]
 gb|OIT33517.1| pentatricopeptide repeat-containing protein, chloroplastic
           [Nicotiana attenuata]
          Length = 488

 Score =  419 bits (1078), Expect = e-142
 Identities = 214/310 (69%), Positives = 249/310 (80%)
 Frame = -2

Query: 951 PPSTAIPLKFTKMTSISLPFTSSSLQLSPTLKFTHISTPIHAFTHHPSSPSGIRMCGVSA 772
           P S +  ++FT  T+ +  F    L  +P L FT+     +              C VS 
Sbjct: 4   PFSYSGSVQFTSSTTTTPTFQQPKLTHNPWLNFTYKRPVFYVIR-----------C-VST 51

Query: 771 RPQRKPGPKKTHPKRXXXXXSEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLF 592
           RP RK G             SEA++LV L+++NF+DK+PLV+TLNKYVKFVRTEHCFLLF
Sbjct: 52  RPGRKSGTMSR------IGSSEAQELVTLLMKNFSDKKPLVSTLNKYVKFVRTEHCFLLF 105

Query: 591 EELGRSDKWLQCLEVFRWMQKQKWYIADNGVYSKVISVMGKKGQTRMAMWLFSEMRNSGC 412
           EELG++D WLQCLEVFRWMQKQ+WYIADNGVYSK+ISVMGKKGQ RMAMWLFSEMRNSGC
Sbjct: 106 EELGKTDNWLQCLEVFRWMQKQRWYIADNGVYSKLISVMGKKGQIRMAMWLFSEMRNSGC 165

Query: 411 KPDTSVYNALITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNV 232
           +PDTSVYNA+I+AHLHSRDKSKALAKA+ YFEKMKGMERC PSIVTYNILLRAFAQAKNV
Sbjct: 166 RPDTSVYNAVISAHLHSRDKSKALAKAMGYFEKMKGMERCNPSIVTYNILLRAFAQAKNV 225

Query: 231 DQVNALFKDLDESIVTPDIYTFNGVMDAYGKIGMIREMESVLSRMKSNQIKPDIITFNLL 52
           +QV+AL KDL+ESIVTPDI+TFNG+MDAYGK GMI+EME VLSRMKSN++KPDIITFN+L
Sbjct: 226 EQVDALLKDLEESIVTPDIFTFNGLMDAYGKNGMIKEMEHVLSRMKSNELKPDIITFNIL 285

Query: 51  IDAYGRKQEF 22
           ID+YG+KQEF
Sbjct: 286 IDSYGKKQEF 295


>ref|XP_009608341.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Nicotiana tomentosiformis]
          Length = 488

 Score =  419 bits (1078), Expect = e-142
 Identities = 212/301 (70%), Positives = 245/301 (81%), Gaps = 6/301 (1%)
 Frame = -2

Query: 906 ISLPFTSSSLQLSPTLKFTHISTPIHAFTHHP------SSPSGIRMCGVSARPQRKPGPK 745
           ++LPF+ S     P+   T  +      TH+P        P    +  VS RP RK G  
Sbjct: 1   MTLPFSYSGSVQFPSSTTTTPTFQQPRLTHNPWLNFTYKRPVFYLIRCVSTRPGRKSGTT 60

Query: 744 KTHPKRXXXXXSEAEDLVRLIVRNFTDKQPLVNTLNKYVKFVRTEHCFLLFEELGRSDKW 565
            T          E ++LV L++RNF+DK+PLV+TLNKYVKFVRTEHCFLLFEELG++D W
Sbjct: 61  STRGSS------EEQELVTLLMRNFSDKKPLVSTLNKYVKFVRTEHCFLLFEELGKTDNW 114

Query: 564 LQCLEVFRWMQKQKWYIADNGVYSKVISVMGKKGQTRMAMWLFSEMRNSGCKPDTSVYNA 385
           LQCLEVFRWMQKQ+WYIADNGVYSK+ISVMGKKGQ RMAMWLFSEMRNSGC+PDTSVYNA
Sbjct: 115 LQCLEVFRWMQKQRWYIADNGVYSKLISVMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNA 174

Query: 384 LITAHLHSRDKSKALAKALSYFEKMKGMERCKPSIVTYNILLRAFAQAKNVDQVNALFKD 205
           +I+AHLHSRDKSKALAKA+ YFEKMKGMERC PSIVTYNILLRAFAQAKNV+QV+AL KD
Sbjct: 175 VISAHLHSRDKSKALAKAMGYFEKMKGMERCNPSIVTYNILLRAFAQAKNVEQVDALMKD 234

Query: 204 LDESIVTPDIYTFNGVMDAYGKIGMIREMESVLSRMKSNQIKPDIITFNLLIDAYGRKQE 25
           L+ESIVTPDI+TFNG+MDAYGK GMI+EME VLSRMKSN++KPDIITFN+LID+YG+KQE
Sbjct: 235 LEESIVTPDIFTFNGLMDAYGKNGMIKEMEHVLSRMKSNELKPDIITFNILIDSYGKKQE 294

Query: 24  F 22
           F
Sbjct: 295 F 295