BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00023311
         (584 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP76107.1| Putative ribonuclease H protein At1g65750 [Cajanu...    45   2e-06
emb|CDP14470.1| unnamed protein product [Coffea canephora]             44   8e-06

>gb|KYP76107.1| Putative ribonuclease H protein At1g65750 [Cajanus cajan]
          Length = 682

 Score = 45.4 bits (106), Expect(2) = 2e-06
 Identities = 24/65 (36%), Positives = 36/65 (55%)
 Frame = -3

Query: 555 ILMSEAKASSSWIWKSLMKPKHVLKLGMRSQIGDGKSTRICKHPWVSNGQFILSKTDAMT 376
           IL +    + S+ WKS  K KH L  G+R +IG GKS  I   PW+ + Q  + K+ + T
Sbjct: 217 ILEANLGHNPSYTWKSFWKAKHFLNDGLRWKIGSGKSISIWNEPWILHNQTYI-KSPSCT 275

Query: 375 TNHYQ 361
            + Y+
Sbjct: 276 NDVYK 280



 Score = 33.9 bits (76), Expect(2) = 2e-06
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = -2

Query: 349 WNEDIIFRNFNGSTTQNILLVLIHHHFSRDRFIWQ 245
           WN +II   F+ +TT++IL   ++ H + D ++W+
Sbjct: 295 WNHNIIHHIFDEATTKDILATPVYSHCTDDSYVWK 329


>emb|CDP14470.1| unnamed protein product [Coffea canephora]
          Length = 660

 Score = 44.3 bits (103), Expect(2) = 8e-06
 Identities = 18/49 (36%), Positives = 31/49 (63%)
 Frame = -3

Query: 564 RGGILMSEAKASSSWIWKSLMKPKHVLKLGMRSQIGDGKSTRICKHPWV 418
           +  IL    K ++SWIW+ L+  + V++ G+  +IG+G+ST I  H W+
Sbjct: 188 KDSILTCRPKQNASWIWQGLLGARRVVEKGVIRRIGNGRSTSIWGHRWI 236



 Score = 33.1 bits (74), Expect(2) = 8e-06
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -2

Query: 355 HTWNEDIIFRNFNGSTTQNILLVLIHHHFSRDRFIWQH 242
           H W  + IF++FN S  + IL + +      D + WQH
Sbjct: 264 HRWKRNTIFQHFNQSDAEKILNIPLSLMGREDNYYWQH 301