BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00022753
         (1856 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011080768.1| putative tRNA pseudouridine synthase [Sesamu...   809   0.0  
gb|PIN13457.1| Pseudouridylate synthase [Handroanthus impetigino...   792   0.0  
gb|PIN09232.1| Pseudouridylate synthase [Handroanthus impetigino...   790   0.0  
ref|XP_012839130.1| PREDICTED: putative tRNA pseudouridine synth...   733   0.0  
gb|KZV25771.1| tRNA pseudouridine synthase-like [Dorcoceras hygr...   682   0.0  
emb|CDP04070.1| unnamed protein product [Coffea canephora]            647   0.0  
ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synth...   638   0.0  
ref|XP_019229485.1| PREDICTED: putative tRNA pseudouridine synth...   636   0.0  
ref|XP_010650837.1| PREDICTED: putative tRNA pseudouridine synth...   633   0.0  
ref|XP_010650836.1| PREDICTED: putative tRNA pseudouridine synth...   633   0.0  
ref|XP_009592048.1| PREDICTED: putative tRNA pseudouridine synth...   633   0.0  
emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]   633   0.0  
emb|CBI15850.3| unnamed protein product, partial [Vitis vinifera]     628   0.0  
ref|XP_009789296.1| PREDICTED: putative tRNA pseudouridine synth...   628   0.0  
ref|XP_015088255.1| PREDICTED: putative tRNA pseudouridine synth...   625   0.0  
ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synth...   625   0.0  
ref|XP_019071271.1| PREDICTED: putative tRNA pseudouridine synth...   625   0.0  
ref|XP_015088254.1| PREDICTED: putative tRNA pseudouridine synth...   625   0.0  
ref|XP_021277897.1| putative tRNA pseudouridine synthase isoform...   625   0.0  
ref|XP_016542097.1| PREDICTED: putative tRNA pseudouridine synth...   624   0.0  

>ref|XP_011080768.1| putative tRNA pseudouridine synthase [Sesamum indicum]
          Length = 561

 Score =  809 bits (2090), Expect = 0.0
 Identities = 414/512 (80%), Positives = 440/512 (85%), Gaps = 4/512 (0%)
 Frame = +2

Query: 2    FLRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYAAATT*VSPSETALKWEPF 181
            FLR+P+SPWW+TP TTN   +N  N KPLK  IL  STS ++AATT V+  E A KWEPF
Sbjct: 50   FLRLPISPWWVTPFTTNFSLQNPTNCKPLKACILCLSTS-FSAATTQVTSLEAARKWEPF 108

Query: 182  RKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKIGWAR 361
            RKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSN+GDLHKIGWAR
Sbjct: 109  RKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNFGDLHKIGWAR 168

Query: 362  SSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQRSFD 541
            SSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFAL SY+NS+LPENIRVFSILPSQRSFD
Sbjct: 169  SSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALVSYVNSHLPENIRVFSILPSQRSFD 228

Query: 542  ARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVRAKYR 721
            ARRECSIRKYSYLLPAEIIGVKENFTA EVDNHLSDFNDILNTFEGEHPFHNYT+R+KYR
Sbjct: 229  ARRECSIRKYSYLLPAEIIGVKENFTADEVDNHLSDFNDILNTFEGEHPFHNYTIRSKYR 288

Query: 722  KQ-PRVSSGNGSVSKRVMSSIVQSVSESEGSDAEDIHESNESLAIGTGE---NXXXXXXX 889
            KQ  R SSGNG V KR   S +Q  SE E SD ED HE+NESLA   GE   +       
Sbjct: 289  KQLQRGSSGNGCVLKRATPSNMQGGSELEESDEEDTHEANESLATEFGETKTDSLLPSSG 348

Query: 890  XXXAEVFDAHEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKLEQLSGVN 1069
               A +FD  + N K +N  +PV ARWLHEPD++D+LSASHFRKIFQC CGKLEQLSG+N
Sbjct: 349  RTLAGLFDEDKANSKGQNLIVPVCARWLHEPDDRDRLSASHFRKIFQCRCGKLEQLSGLN 408

Query: 1070 YVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPSEVLILRG 1249
            YVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDIL+LSLSKFSRIV+PLAPSEVLILRG
Sbjct: 409  YVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILQLSLSKFSRIVLPLAPSEVLILRG 468

Query: 1250 NNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPWKDWVEIL 1429
            NNFVIRKRPGNI RPEMLTLVESEEILKLVDDFY SVMLPQLS FLDP   PW DWVEIL
Sbjct: 469  NNFVIRKRPGNITRPEMLTLVESEEILKLVDDFYNSVMLPQLSRFLDPSNSPWNDWVEIL 528

Query: 1430 DANTSIPESQLNEVRIAWKLWKEEFDSRKKTA 1525
            DANT IPE+QL EVR AWKLWKEEF SRKK A
Sbjct: 529  DANTGIPETQLIEVRNAWKLWKEEFQSRKKMA 560


>gb|PIN13457.1| Pseudouridylate synthase [Handroanthus impetiginosus]
          Length = 516

 Score =  792 bits (2045), Expect = 0.0
 Identities = 402/513 (78%), Positives = 439/513 (85%), Gaps = 4/513 (0%)
 Frame = +2

Query: 2    FLRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYAAAT--T*VSPSETALKWE 175
            FLR P+SPWW+ PLTTN RF+  +  KPLKVI+LRFSTS  + AT  T V  S+TA KWE
Sbjct: 5    FLRAPISPWWVNPLTTNLRFREHSCNKPLKVIVLRFSTSSSSTATAATNVLQSKTAPKWE 64

Query: 176  PFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKIGW 355
            PFRKKKV+MRVGYVGSDYRGLQIQRDE ALSTIEGELEKAIFKAGGIRDSN+GDLHKIGW
Sbjct: 65   PFRKKKVIMRVGYVGSDYRGLQIQRDEPALSTIEGELEKAIFKAGGIRDSNFGDLHKIGW 124

Query: 356  ARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQRS 535
            ARSSRTDKGVHSLATMISLK+EIP+FAW NDPNGFALA  +NSYLPENIRVFSILPSQRS
Sbjct: 125  ARSSRTDKGVHSLATMISLKMEIPDFAWGNDPNGFALARCVNSYLPENIRVFSILPSQRS 184

Query: 536  FDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVRAK 715
            FD RREC+IR+YSYLLP E+IGVK+NFTAGEVD+HLSDFNDILNTFEGEHPFHNYTVR+K
Sbjct: 185  FDPRRECNIRRYSYLLPVEVIGVKDNFTAGEVDHHLSDFNDILNTFEGEHPFHNYTVRSK 244

Query: 716  YRKQ--PRVSSGNGSVSKRVMSSIVQSVSESEGSDAEDIHESNESLAIGTGENXXXXXXX 889
            YR++   R SS NGSVSKR +S   QS +ESEGSD +D +  NESL    GE        
Sbjct: 245  YRRKSYQRGSSANGSVSKRDVSPNEQSDTESEGSDDKDTNGENESLTTDYGET-DSLCSD 303

Query: 890  XXXAEVFDAHEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKLEQLSGVN 1069
               A V +  ED+LKE N  +P+ ARWL+EPDEKD+LS SHFRKIFQCCCG+LEQLSG+N
Sbjct: 304  RVLAVVNEGDEDSLKEPNLVVPLRARWLYEPDEKDRLSGSHFRKIFQCCCGRLEQLSGLN 363

Query: 1070 YVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPSEVLILRG 1249
            YVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDIL LSLSKFSRIV+PLAPSEVLILRG
Sbjct: 364  YVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILTLSLSKFSRIVLPLAPSEVLILRG 423

Query: 1250 NNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPWKDWVEIL 1429
            NNF IRKRP  + RPEMLTLVESEEILKLV+DFY+SVMLPQLS FLDP + PW DWV IL
Sbjct: 424  NNFAIRKRPDKLTRPEMLTLVESEEILKLVNDFYHSVMLPQLSKFLDPSKSPWNDWVAIL 483

Query: 1430 DANTSIPESQLNEVRIAWKLWKEEFDSRKKTAV 1528
            DANTSIPESQLNEVRIAWK WKEE D RKK AV
Sbjct: 484  DANTSIPESQLNEVRIAWKSWKEELDKRKKAAV 516


>gb|PIN09232.1| Pseudouridylate synthase [Handroanthus impetiginosus]
          Length = 516

 Score =  790 bits (2040), Expect = 0.0
 Identities = 401/513 (78%), Positives = 439/513 (85%), Gaps = 4/513 (0%)
 Frame = +2

Query: 2    FLRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYAAAT--T*VSPSETALKWE 175
            FLR P+SPWW+ PLTTN RF+  +  KPLKVI+LRFSTS  + AT  T V  S+TA KWE
Sbjct: 5    FLRAPISPWWVNPLTTNLRFREHSCNKPLKVIVLRFSTSSSSTATAATNVLQSKTAPKWE 64

Query: 176  PFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKIGW 355
            PFRKKKV+MRVGYVGSDYRGLQIQRDE ALSTIEGELEKAIFKAGGIRDSN+GDLHKIGW
Sbjct: 65   PFRKKKVIMRVGYVGSDYRGLQIQRDEPALSTIEGELEKAIFKAGGIRDSNFGDLHKIGW 124

Query: 356  ARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQRS 535
            ARSSRTDKGVHSLATMISLK+EIP+FAW+NDPNGFALA  +NSYLPENIRVFSILPSQRS
Sbjct: 125  ARSSRTDKGVHSLATMISLKMEIPDFAWENDPNGFALARCVNSYLPENIRVFSILPSQRS 184

Query: 536  FDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVRAK 715
            FD RREC+IR+YSYLLP E+IGVK+NFTAGEVD+HLSDFNDILNTFEGEHPFHNYTVR+K
Sbjct: 185  FDPRRECNIRRYSYLLPVEVIGVKDNFTAGEVDHHLSDFNDILNTFEGEHPFHNYTVRSK 244

Query: 716  YRKQ--PRVSSGNGSVSKRVMSSIVQSVSESEGSDAEDIHESNESLAIGTGENXXXXXXX 889
            YR++   R SS NGSVSKR +S   QS +ESEGSD +D +  NESL     E        
Sbjct: 245  YRRKSYQRGSSANGSVSKRDVSPNEQSDTESEGSDDKDTNGENESLTTDYRET-DSLCSD 303

Query: 890  XXXAEVFDAHEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKLEQLSGVN 1069
               A V +  ED+LKE N  +P+ ARWL+EPDEKD+LS SHFRKIFQCCCGKLEQLSG+N
Sbjct: 304  RVLAVVNEGDEDSLKEPNLVVPLRARWLYEPDEKDRLSGSHFRKIFQCCCGKLEQLSGLN 363

Query: 1070 YVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPSEVLILRG 1249
            YVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDIL LSLSKFSRIV+PLAPSEVLILRG
Sbjct: 364  YVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILTLSLSKFSRIVLPLAPSEVLILRG 423

Query: 1250 NNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPWKDWVEIL 1429
            NNF IRKRP  + RPEMLTLVESEEILKLV+DFY+SVMLPQLS FLDP + PW DWV IL
Sbjct: 424  NNFAIRKRPDKLTRPEMLTLVESEEILKLVNDFYHSVMLPQLSKFLDPSKSPWNDWVAIL 483

Query: 1430 DANTSIPESQLNEVRIAWKLWKEEFDSRKKTAV 1528
            DANTSIPESQLNEVRIAWK WKEE D RKK A+
Sbjct: 484  DANTSIPESQLNEVRIAWKSWKEELDKRKKAAM 516


>ref|XP_012839130.1| PREDICTED: putative tRNA pseudouridine synthase [Erythranthe guttata]
 gb|EYU45681.1| hypothetical protein MIMGU_mgv1a004890mg [Erythranthe guttata]
          Length = 506

 Score =  733 bits (1892), Expect = 0.0
 Identities = 387/514 (75%), Positives = 423/514 (82%), Gaps = 7/514 (1%)
 Frame = +2

Query: 2    FLRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPY--AAATT*VSPSETALKWE 175
            FLR   SP W+T LT +RRFK L ++KP K+ +L FSTS    AAA   VSPSE A KWE
Sbjct: 5    FLR---SPRWVT-LTPHRRFKYLTDFKPFKLSVLGFSTSSSSAAAAAVEVSPSENADKWE 60

Query: 176  PFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKIGW 355
            PFRKKKVVMRVGYVGSDY+GLQIQRD+   STIEGELE AI+KAGGIRDSN+GDL+KIGW
Sbjct: 61   PFRKKKVVMRVGYVGSDYKGLQIQRDQPEFSTIEGELENAIYKAGGIRDSNFGDLNKIGW 120

Query: 356  ARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQRS 535
            ARSSRTDKGVHSLATMI+LKLEIPE AW+NDPNGFALA+Y+NSYLP NIRVFSILPSQRS
Sbjct: 121  ARSSRTDKGVHSLATMITLKLEIPESAWNNDPNGFALATYVNSYLPRNIRVFSILPSQRS 180

Query: 536  FDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVRAK 715
            FDARRECSIRKYSYLLPAEIIGVKEN TA EVD+HLSDFNDILNTF+GEHPFHNYTVR+K
Sbjct: 181  FDARRECSIRKYSYLLPAEIIGVKENSTASEVDHHLSDFNDILNTFQGEHPFHNYTVRSK 240

Query: 716  YRKQ-PRVSSGNGSVSKRVMSSIVQSVSESEGSDAEDIHES----NESLAIGTGENXXXX 880
            YRKQ P+  S   S SK   S  VQS   SEGSD E+  E      ESLA    E     
Sbjct: 241  YRKQFPKKGS---SASKMGKSLDVQSEFVSEGSDDEEEEEDTNVVTESLATEAEETKYDS 297

Query: 881  XXXXXXAEVFDAHEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKLEQLS 1060
                         ED  K++N   PVLARWLHEPDEKD++SASHFRKIFQC CGKLEQLS
Sbjct: 298  LLPKD-------EEDQPKKQNLVSPVLARWLHEPDEKDRISASHFRKIFQCSCGKLEQLS 350

Query: 1061 GVNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPSEVLI 1240
            G+N+VEISICGESFMLHQIRKMVGTAIA+KR+LLPRDILKLSLSKFSRIVVPLAPSEVLI
Sbjct: 351  GMNFVEISICGESFMLHQIRKMVGTAIAVKRDLLPRDILKLSLSKFSRIVVPLAPSEVLI 410

Query: 1241 LRGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPWKDWV 1420
            LRGNNFVIR RPGNI RPEMLTLVES+EILKLVDDFYYSVMLPQLS FLDP++ PW +WV
Sbjct: 411  LRGNNFVIRNRPGNIKRPEMLTLVESKEILKLVDDFYYSVMLPQLSVFLDPVKSPWNEWV 470

Query: 1421 EILDANTSIPESQLNEVRIAWKLWKEEFDSRKKT 1522
            ++LDANT IPESQL EVR AWKLW+EEF   +KT
Sbjct: 471  DLLDANTCIPESQLEEVRSAWKLWREEFYGPRKT 504


>gb|KZV25771.1| tRNA pseudouridine synthase-like [Dorcoceras hygrometricum]
          Length = 515

 Score =  682 bits (1759), Expect = 0.0
 Identities = 361/527 (68%), Positives = 409/527 (77%), Gaps = 19/527 (3%)
 Frame = +2

Query: 5    LRIPVSPWWLTPLTTNRRFKNLNNYKPL-KVIILRFSTSPYAAATT*VSPSE-------- 157
            LR P++P     L T+ +  N  N   L K+I+L +STS  AA  T  + +         
Sbjct: 7    LRNPIAPC----LFTSAKIVNSGNRNKLFKLILLHYSTSSSAATATATATATAPPQLLET 62

Query: 158  TALKWEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGD 337
            T  KWEPFRKKKVVMRVGYVGSDYR             +EGELEKAIF +GGIR+SN+GD
Sbjct: 63   TVRKWEPFRKKKVVMRVGYVGSDYRA------------VEGELEKAIFSSGGIRESNFGD 110

Query: 338  LHKIGWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSI 517
            LHKIGWARSSRTDKGVHSLAT+ISLK+EIPEFAW+NDPNGF LA YINS+LP NIRVFSI
Sbjct: 111  LHKIGWARSSRTDKGVHSLATVISLKMEIPEFAWNNDPNGFILAGYINSHLPNNIRVFSI 170

Query: 518  LPSQRSFDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHN 697
            +PSQRSFDARRECSIRKYSYLLPA+IIGVK+++TA EVD H+S FNDILN F+GEHPFHN
Sbjct: 171  VPSQRSFDARRECSIRKYSYLLPADIIGVKKSYTAVEVDRHISCFNDILNEFKGEHPFHN 230

Query: 698  YTVRAKYRKQ--PRVSSGNGSVS-----KRVMSSIVQSVSESEGSDAEDIHESNESLAIG 856
            YT+RAKYRKQ  P+ S+GNGS       KR  SS VQ+ S SE SD EDIH +      G
Sbjct: 231  YTIRAKYRKQFAPKSSAGNGSAGNGSARKRKGSSNVQNGSMSEESDGEDIHGTTLMTDSG 290

Query: 857  TGE---NXXXXXXXXXXAEVFDAHEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIF 1027
              E   +            V +AH  NL + + T+PVLARWLHEPD  DKLS SHFRKIF
Sbjct: 291  ESECNFHFPCSDQTLIGLSVVEAH--NLNKLDPTLPVLARWLHEPDAMDKLSGSHFRKIF 348

Query: 1028 QCCCGKLEQLSGVNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRI 1207
            QCCCG LEQLSG+NYVEI+ICGESFMLHQIRKMVGTA+AIKR+LLPRDIL+LSLSKFSRI
Sbjct: 349  QCCCGNLEQLSGLNYVEITICGESFMLHQIRKMVGTAVAIKRSLLPRDILQLSLSKFSRI 408

Query: 1208 VVPLAPSEVLILRGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFL 1387
            V+PLAPSE L+LRGNNF IRKRPGNI RPEM TLVESE+IL LVDDFY SVMLPQL+TFL
Sbjct: 409  VMPLAPSEALVLRGNNFAIRKRPGNIRRPEMSTLVESEQILDLVDDFYSSVMLPQLATFL 468

Query: 1388 DPLRPPWKDWVEILDANTSIPESQLNEVRIAWKLWKEEFDSRKKTAV 1528
            DP + PWKDWVE+LDANT IPESQLNEVRIAW LWKEE +SRKK++V
Sbjct: 469  DPSKAPWKDWVEVLDANTRIPESQLNEVRIAWNLWKEEIESRKKSSV 515


>emb|CDP04070.1| unnamed protein product [Coffea canephora]
          Length = 538

 Score =  647 bits (1670), Expect = 0.0
 Identities = 344/536 (64%), Positives = 400/536 (74%), Gaps = 31/536 (5%)
 Frame = +2

Query: 5    LRIPVSPWWLTPLT-TNRRFKNLNNYKPLKVIILRFSTSPYAAATT*VSPSETAL----- 166
            LR+P+SPW       T  +F N N  KPLK  +LRFSTS  AAA+   +     L     
Sbjct: 6    LRLPLSPWLAARAAPTTLQFFNPN--KPLKPFLLRFSTS--AAASDAAAQDSVPLPPSSS 61

Query: 167  -------KWEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDS 325
                   KWEPFRKKKVVMRVGYVGSDYRGLQ+QRDEHAL TIEGELEKA+ KAGGIRDS
Sbjct: 62   PSPPPQNKWEPFRKKKVVMRVGYVGSDYRGLQMQRDEHALPTIEGELEKALHKAGGIRDS 121

Query: 326  NYGDLHKIGWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIR 505
            N+GDL KI WARSSRTDKGVHSLATMIS K+EIPE AW +DPNG ALA+Y+NS+LPENI 
Sbjct: 122  NFGDLQKIAWARSSRTDKGVHSLATMISFKMEIPENAWKDDPNGIALANYVNSFLPENIC 181

Query: 506  VFSILPSQRSFDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEH 685
            VFSILPSQRSFDARREC +RKYSYLLPAEIIG++  FTA EVD HLS+FN  LN+FEGEH
Sbjct: 182  VFSILPSQRSFDARRECDVRKYSYLLPAEIIGIRNEFTAAEVDLHLSEFNGFLNSFEGEH 241

Query: 686  PFHNYTVRAKYRKQPRVSSGNGSVSKRVMSSIVQSVSESEGSDAEDIHESNESLAIGTGE 865
            PFHNYT+RAKYRKQ R  S N    K   SS  ++  E EGSD + + E  E   +   +
Sbjct: 242  PFHNYTIRAKYRKQLRTRSSN-ICDKGARSSDEEAACEHEGSDGDLVSEGKEVDTVDESD 300

Query: 866  NXXXXXXXXXXAE----VFDAH------------ED--NLKEENRTIPVLARWLHEPDEK 991
                        E    ++D+             ED  +LK++N  +P+ ARWL+EPD +
Sbjct: 301  GVEPIDGQKVVPELVKRIYDSSPSFCESPSSSYGEDGRSLKKQNSALPI-ARWLYEPDAR 359

Query: 992  DKLSASHFRKIFQCCCGKLEQLSGVNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRD 1171
            DKLSA+HFRKIFQC CGKLE++ G+NYVEI ICGESFMLHQIRKMVGTA+AIKR LLP D
Sbjct: 360  DKLSAAHFRKIFQCYCGKLERMCGMNYVEIWICGESFMLHQIRKMVGTAVAIKRKLLPVD 419

Query: 1172 ILKLSLSKFSRIVVPLAPSEVLILRGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFY 1351
            +L+LSLSKFSRIV+PLAPSEVLILRGNNF +RKRPG   RPEMLTL+ESEEI+  VD+FY
Sbjct: 420  VLQLSLSKFSRIVLPLAPSEVLILRGNNFALRKRPGKETRPEMLTLLESEEIVTAVDEFY 479

Query: 1352 YSVMLPQLSTFLDPLRPPWKDWVEILDANTSIPESQLNEVRIAWKLWKEEFDSRKK 1519
            +SVMLPQ+STFL+P + PW DWV  LDANTSIPE QL EVR AWKLWKE+ +++ K
Sbjct: 480  HSVMLPQVSTFLNPSKYPWNDWVNTLDANTSIPEFQLAEVRTAWKLWKEKPENKIK 535


>ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Solanum
            tuberosum]
          Length = 487

 Score =  638 bits (1645), Expect = 0.0
 Identities = 325/505 (64%), Positives = 388/505 (76%), Gaps = 2/505 (0%)
 Frame = +2

Query: 5    LRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYAAATT*VSPSETALKWEPFR 184
            +R+P  P       TN RF   +  K    I+  FSTSP          S  + KW+PF 
Sbjct: 6    VRLPQIP------VTNLRFSRSSTLK----IVRCFSTSPEDL-------SVQSNKWDPFI 48

Query: 185  KKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKIGWARS 364
            KKKVVMRVGYVGSDYRGLQ+QRDEH LSTIEGELEKAIFKAGGIRDSN+G+L+KIGWARS
Sbjct: 49   KKKVVMRVGYVGSDYRGLQMQRDEHQLSTIEGELEKAIFKAGGIRDSNFGNLYKIGWARS 108

Query: 365  SRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQRSFDA 544
            SRTDKGVHSLATMISLK+EIP  AW++DPNG ALA+ +NS LPENIRVFSILPS++ FDA
Sbjct: 109  SRTDKGVHSLATMISLKMEIPADAWEDDPNGIALANCVNSSLPENIRVFSILPSKKRFDA 168

Query: 545  RRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVRAKYRK 724
            RREC+ RKYSYL+PAEIIG+K + T+ E++ H+++FNDILN+FEGEHPFHNYT+R+KYRK
Sbjct: 169  RRECNARKYSYLIPAEIIGIKNDSTSSEIEYHIANFNDILNSFEGEHPFHNYTIRSKYRK 228

Query: 725  QPRVSS--GNGSVSKRVMSSIVQSVSESEGSDAEDIHESNESLAIGTGENXXXXXXXXXX 898
            Q    +   N S+ K+   S  + +S SE SD E   +    + I   EN          
Sbjct: 229  QSPARNLLKNESLLKKGRPSSEKEISGSEESDGEQNGKEKGVVTIVEAENQNPEGNCNEK 288

Query: 899  AEVFDAHEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKLEQLSGVNYVE 1078
                     + K+ N  IP+ ARWLHEPD +DKLS++HFR+IF C CGKLE+L G+NYVE
Sbjct: 289  VS-------HSKDLNSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNYVE 341

Query: 1079 ISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPSEVLILRGNNF 1258
            +SICGESFMLHQIRKMVGTA+AIKRNLLP DIL++SL KFSRIV+PLAPSEVL+L+GNNF
Sbjct: 342  VSICGESFMLHQIRKMVGTAVAIKRNLLPHDILRMSLCKFSRIVLPLAPSEVLVLKGNNF 401

Query: 1259 VIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPWKDWVEILDAN 1438
             +R  PGNIIRPEMLTL+ES++ILK VDDFYYS MLPQLS FLDP + PW +WVEILDAN
Sbjct: 402  ALRNHPGNIIRPEMLTLLESDDILKAVDDFYYSTMLPQLSRFLDPSKSPWSEWVEILDAN 461

Query: 1439 TSIPESQLNEVRIAWKLWKEEFDSR 1513
            TSIP+SQL EVR+AWKLWK ++DSR
Sbjct: 462  TSIPDSQLEEVRVAWKLWKAQYDSR 486


>ref|XP_019229485.1| PREDICTED: putative tRNA pseudouridine synthase isoform X2 [Nicotiana
            attenuata]
 gb|OIT30066.1| putative trna uridine synthase [Nicotiana attenuata]
          Length = 517

 Score =  636 bits (1640), Expect = 0.0
 Identities = 331/520 (63%), Positives = 393/520 (75%), Gaps = 15/520 (2%)
 Frame = +2

Query: 5    LRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYAAATT*VSPSETAL------ 166
            LR+P+ P       TN RF +    KPL  I+  FSTSP       V PS+TA       
Sbjct: 6    LRLPLIP------LTNLRFSSYTR-KPL-TILCSFSTSPS------VIPSDTAEDLSPPP 51

Query: 167  -----KWEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNY 331
                 KWEPF KKKVVMRVGYVGSDYRGLQ+QRDEH LSTIEGELEKAIFKAGGIRDSN+
Sbjct: 52   PARSNKWEPFIKKKVVMRVGYVGSDYRGLQMQRDEHELSTIEGELEKAIFKAGGIRDSNF 111

Query: 332  GDLHKIGWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVF 511
            G+L+KIGWARSSRTDKGVHSL+TMISLK+EIPE AW +DPNG +LA+ +NSYLPENIRVF
Sbjct: 112  GNLYKIGWARSSRTDKGVHSLSTMISLKMEIPEDAWQDDPNGISLANCVNSYLPENIRVF 171

Query: 512  SILPSQRSFDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPF 691
            SILPS++ FDARREC+ RKYSYLLPAEIIG+K   T+ E+D HLS+FNDILN+FEGEHPF
Sbjct: 172  SILPSKKRFDARRECNARKYSYLLPAEIIGIKNGSTSSEIDYHLSNFNDILNSFEGEHPF 231

Query: 692  HNYTVRAKYRKQ--PRVSSGNGSVSKRVMSSIVQSVSESEGSDAEDIHESNESLAIGTGE 865
            HNYT+R+KYRK    R       + K+   S    +S  E SD E+  +    +     E
Sbjct: 232  HNYTIRSKYRKHSPARKLLQYDCLLKKGRPSTEDEISGCEESDGEENCKEKGVVTTVEDE 291

Query: 866  NXXXXXXXXXXAEVFDAHE--DNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCC 1039
            N           +  + +E   + KE    +P+LARWLHE D +DKLS++HFR+IF C C
Sbjct: 292  NQNPVCNLSTRNQAGNYNEKLSHSKELYSALPILARWLHETDARDKLSSAHFRRIFHCHC 351

Query: 1040 GKLEQLSGVNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPL 1219
            GKLE+L  +NYVE+SICGESFMLHQIRKMVGTA+AIKRNLLP D+L++SL KFSRIV+PL
Sbjct: 352  GKLEKLFSMNYVEVSICGESFMLHQIRKMVGTAVAIKRNLLPPDVLRMSLCKFSRIVLPL 411

Query: 1220 APSEVLILRGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLR 1399
            APSEVL+L+GNNF +R +PGNI RPEMLTL+ESE+I+K VD+FYYS MLPQLS FLDP +
Sbjct: 412  APSEVLVLKGNNFALRNQPGNITRPEMLTLLESEDIIKAVDEFYYSTMLPQLSKFLDPSK 471

Query: 1400 PPWKDWVEILDANTSIPESQLNEVRIAWKLWKEEFDSRKK 1519
             PW DWVEILDANT IPESQL EVRI+WKLWKE+++SR K
Sbjct: 472  YPWSDWVEILDANTRIPESQLEEVRISWKLWKEQYESRTK 511


>ref|XP_010650837.1| PREDICTED: putative tRNA pseudouridine synthase isoform X2 [Vitis
            vinifera]
          Length = 516

 Score =  633 bits (1632), Expect = 0.0
 Identities = 327/512 (63%), Positives = 395/512 (77%), Gaps = 7/512 (1%)
 Frame = +2

Query: 5    LRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYAAATT*VSPSETALKWEPFR 184
            LR P+ PW ++  T+N RF   +N + L    L  S+S  +  T   +P ++  KWE FR
Sbjct: 6    LRFPLFPWIISNHTSNLRF---SNPRILPQWSLHCSSSSSSTVTE-SNPDQSVQKWESFR 61

Query: 185  KKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKIGWARS 364
            KKKVVMRVGYVG++YRGLQ+QRDE +LSTIEGELE A+FKAGGIRDSNYG+LHKIGW RS
Sbjct: 62   KKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLHKIGWDRS 121

Query: 365  SRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQRSFDA 544
            SRTDKGVHSLATMISLK+EIP  AW  DPNG ALA+Y+N +LP NI+VFSILPSQRSFDA
Sbjct: 122  SRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILPSQRSFDA 181

Query: 545  RRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVRAKYRK 724
            RREC +R+YSYLLPAEIIG+K N +A E+D+H+++FNDILNTFEGEHPF NYT+R+KYRK
Sbjct: 182  RRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYTIRSKYRK 241

Query: 725  Q--PRVSSGNGSVSKRVMSSIVQSVSESEGSDAEDIHESNESLA--IGTGENXXXXXXXX 892
            Q   + S GNG V +R  SS   S SE E SD E+    N  ++     GEN        
Sbjct: 242  QFPAKQSPGNGGVFRRAKSSGEASTSEFEVSDGEENSGINGVISSDYDEGENQNSSESTS 301

Query: 893  XXAEVFDAHEDN---LKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKLEQLSG 1063
                   +  +N   LKE++  + V ARWLH PDE+D++SASHFRKIF C CGKLE+  G
Sbjct: 302  FVEHPVGSSNNNEKGLKEQSPKLVVRARWLHGPDERDRISASHFRKIFNCSCGKLEKFLG 361

Query: 1064 VNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPSEVLIL 1243
            ++YVE+SICGESFMLHQIRKMVGTAIA+KR LLPRDIL LSL+KFSRIV+PLAPSEVLIL
Sbjct: 362  LDYVELSICGESFMLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLIL 421

Query: 1244 RGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPWKDWVE 1423
            RGN+F +RK+PGN+ RPEMLTL+ESEEILK VD+FY SV+LPQ+S FLDP + PW DW+E
Sbjct: 422  RGNSFSVRKKPGNVKRPEMLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLE 481

Query: 1424 ILDANTSIPESQLNEVRIAWKLWKEEFDSRKK 1519
             L   +SIPE++L++VR AWKLWKE F SR K
Sbjct: 482  NLTL-SSIPEAELDDVRTAWKLWKENFRSRTK 512


>ref|XP_010650836.1| PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Vitis
            vinifera]
          Length = 520

 Score =  633 bits (1632), Expect = 0.0
 Identities = 327/512 (63%), Positives = 395/512 (77%), Gaps = 7/512 (1%)
 Frame = +2

Query: 5    LRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYAAATT*VSPSETALKWEPFR 184
            LR P+ PW ++  T+N RF   +N + L    L  S+S  +  T   +P ++  KWE FR
Sbjct: 6    LRFPLFPWIISNHTSNLRF---SNPRILPQWSLHCSSSSSSTVTE-SNPDQSVQKWESFR 61

Query: 185  KKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKIGWARS 364
            KKKVVMRVGYVG++YRGLQ+QRDE +LSTIEGELE A+FKAGGIRDSNYG+LHKIGW RS
Sbjct: 62   KKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLHKIGWDRS 121

Query: 365  SRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQRSFDA 544
            SRTDKGVHSLATMISLK+EIP  AW  DPNG ALA+Y+N +LP NI+VFSILPSQRSFDA
Sbjct: 122  SRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILPSQRSFDA 181

Query: 545  RRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVRAKYRK 724
            RREC +R+YSYLLPAEIIG+K N +A E+D+H+++FNDILNTFEGEHPF NYT+R+KYRK
Sbjct: 182  RRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYTIRSKYRK 241

Query: 725  Q--PRVSSGNGSVSKRVMSSIVQSVSESEGSDAEDIHESNESLA--IGTGENXXXXXXXX 892
            Q   + S GNG V +R  SS   S SE E SD E+    N  ++     GEN        
Sbjct: 242  QFPAKQSPGNGGVFRRAKSSGEASTSEFEVSDGEENSGINGVISSDYDEGENQNSSESTS 301

Query: 893  XXAEVFDAHEDN---LKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKLEQLSG 1063
                   +  +N   LKE++  + V ARWLH PDE+D++SASHFRKIF C CGKLE+  G
Sbjct: 302  FVEHPVGSSNNNEKGLKEQSPKLVVRARWLHGPDERDRISASHFRKIFNCSCGKLEKFLG 361

Query: 1064 VNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPSEVLIL 1243
            ++YVE+SICGESFMLHQIRKMVGTAIA+KR LLPRDIL LSL+KFSRIV+PLAPSEVLIL
Sbjct: 362  LDYVELSICGESFMLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLIL 421

Query: 1244 RGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPWKDWVE 1423
            RGN+F +RK+PGN+ RPEMLTL+ESEEILK VD+FY SV+LPQ+S FLDP + PW DW+E
Sbjct: 422  RGNSFSVRKKPGNVKRPEMLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLE 481

Query: 1424 ILDANTSIPESQLNEVRIAWKLWKEEFDSRKK 1519
             L   +SIPE++L++VR AWKLWKE F SR K
Sbjct: 482  NLTL-SSIPEAELDDVRTAWKLWKENFRSRTK 512


>ref|XP_009592048.1| PREDICTED: putative tRNA pseudouridine synthase isoform X2 [Nicotiana
            tomentosiformis]
          Length = 521

 Score =  633 bits (1632), Expect = 0.0
 Identities = 326/518 (62%), Positives = 392/518 (75%), Gaps = 13/518 (2%)
 Frame = +2

Query: 5    LRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYAAATT*VS---------PSE 157
            LR+P+ P       TN RF +    KPL  I+  FSTSP    +   +         P  
Sbjct: 6    LRLPLIP------LTNLRFSSYTR-KPL-TILCSFSTSPSVIPSEPCTTTAEDLSPPPPA 57

Query: 158  TALKWEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGD 337
             + KWEPF KKKVVMRVGYVGSDYRGLQ+QRDEH LSTIEGELEKAIFKAGGIRDSN+G+
Sbjct: 58   RSNKWEPFIKKKVVMRVGYVGSDYRGLQMQRDEHELSTIEGELEKAIFKAGGIRDSNFGN 117

Query: 338  LHKIGWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSI 517
            L+KIGWARSSRTDKGVHSL+TMISLK+EIPE AW +DPNG +LA+ +NSYLPENIRVFSI
Sbjct: 118  LYKIGWARSSRTDKGVHSLSTMISLKMEIPEDAWQDDPNGISLANCVNSYLPENIRVFSI 177

Query: 518  LPSQRSFDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHN 697
            LPS++ FDARREC+ RKYSYLLPAEIIG+K   T+ E+D HLS+FNDILN+FEGEHPFHN
Sbjct: 178  LPSKKRFDARRECNARKYSYLLPAEIIGIKNGSTSSEIDYHLSNFNDILNSFEGEHPFHN 237

Query: 698  YTVRAKYRKQ--PRVSSGNGSVSKRVMSSIVQSVSESEGSDAEDIHESNESLAIGTGENX 871
            YT+R+KYRK    R       + K+   S  + +S  E SD E+  + N  +     EN 
Sbjct: 238  YTIRSKYRKHSPARKLLQYDCLLKKGRPSTEEEISGCEESDGEENCKENGVVTTVEDENQ 297

Query: 872  XXXXXXXXXAEV--FDAHEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGK 1045
                      +   ++    + KE    +P+LARWLHE D +DKLS++HFR+IF C CGK
Sbjct: 298  NPVCNLSTGNQAGNYNGKLSHSKELYPVLPILARWLHETDARDKLSSAHFRRIFHCHCGK 357

Query: 1046 LEQLSGVNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAP 1225
            LE+L  +NYVE+SICGESFMLHQIRKMVGTA+AIKRNLLP D+L++SL KFSRIV+PLAP
Sbjct: 358  LEKLFSMNYVEVSICGESFMLHQIRKMVGTAVAIKRNLLPPDVLRMSLCKFSRIVLPLAP 417

Query: 1226 SEVLILRGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPP 1405
            SEVL+L+GNNF +R +PGNI RPEMLTL+ESE+I+K VD+FYYS +L QLS FLDP + P
Sbjct: 418  SEVLVLKGNNFALRNQPGNITRPEMLTLLESEDIIKAVDEFYYSTVLTQLSKFLDPSKYP 477

Query: 1406 WKDWVEILDANTSIPESQLNEVRIAWKLWKEEFDSRKK 1519
            W DWVEILDANTSIPESQL EVRI+WKLWKE+++SR K
Sbjct: 478  WSDWVEILDANTSIPESQLEEVRISWKLWKEQYESRTK 515


>emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]
          Length = 602

 Score =  633 bits (1633), Expect = 0.0
 Identities = 327/512 (63%), Positives = 395/512 (77%), Gaps = 7/512 (1%)
 Frame = +2

Query: 5    LRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYAAATT*VSPSETALKWEPFR 184
            LR P+ PW ++  T+N RF   +N + L    L  S+S  +  T   +P ++  KWE FR
Sbjct: 6    LRFPLFPWIISNHTSNLRF---SNPRILPQWSLHCSSSSSSTVTE-SNPDQSVQKWESFR 61

Query: 185  KKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKIGWARS 364
            KKKVVMRVGYVG++YRGLQ+QRDE +LSTIEGELE A+FKAGGIRDSNYG+LHKIGW RS
Sbjct: 62   KKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLHKIGWDRS 121

Query: 365  SRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQRSFDA 544
            SRTDKGVHSLATMISLK+EIP  AW  DPNG ALA+Y+N +LP NI+VFSILPSQRSFDA
Sbjct: 122  SRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILPSQRSFDA 181

Query: 545  RRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVRAKYRK 724
            RREC +R+YSYLLPAEIIG+K N +A E+D+H+++FNDILNTFEGEHPF NYT+R+KYRK
Sbjct: 182  RRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYTIRSKYRK 241

Query: 725  Q--PRVSSGNGSVSKRVMSSIVQSVSESEGSDAEDIHESNESLA--IGTGENXXXXXXXX 892
            Q   + S GNG V +R  SS   S SE E SD E+    N  ++     GEN        
Sbjct: 242  QFPAKQSPGNGGVFRRAKSSGEASTSEFEVSDGEENSGVNGVISSDYDEGENQNSSESTS 301

Query: 893  XXAEVFDAHEDN---LKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKLEQLSG 1063
                   +  +N   LKE++  + V ARWLH PDE+D++SASHFRKIF C CGKLE+  G
Sbjct: 302  FVEHPVGSSNNNEKGLKEQSSKLVVRARWLHGPDERDRISASHFRKIFNCSCGKLEKFLG 361

Query: 1064 VNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPSEVLIL 1243
            ++YVE+SICGESFMLHQIRKMVGTAIA+KR LLPRDIL LSL+KFSRIV+PLAPSEVLIL
Sbjct: 362  LDYVELSICGESFMLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLIL 421

Query: 1244 RGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPWKDWVE 1423
            RGN+F +RK+PGN+ RPEMLTL+ESEEILK VD+FY SV+LPQ+S FLDP + PW DW+E
Sbjct: 422  RGNSFSVRKKPGNVKRPEMLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLE 481

Query: 1424 ILDANTSIPESQLNEVRIAWKLWKEEFDSRKK 1519
             L   +SIPE++L++VR AWKLWKE F SR K
Sbjct: 482  NLTL-SSIPEAELDDVRTAWKLWKENFRSRTK 512


>emb|CBI15850.3| unnamed protein product, partial [Vitis vinifera]
          Length = 495

 Score =  628 bits (1620), Expect = 0.0
 Identities = 322/508 (63%), Positives = 393/508 (77%), Gaps = 3/508 (0%)
 Frame = +2

Query: 5    LRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYAAATT*VSPSETALKWEPFR 184
            LR P+ PW ++  T+N RF   +N + L    L  S+S  +  T   +P ++  KWE FR
Sbjct: 6    LRFPLFPWIISNHTSNLRF---SNPRILPQWSLHCSSSSSSTVTE-SNPDQSVQKWESFR 61

Query: 185  KKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKIGWARS 364
            KKKVVMRVGYVG++YRGLQ+QRDE +LSTIEGELE A+FKAGGIRDSNYG+LHKIGW RS
Sbjct: 62   KKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGIRDSNYGNLHKIGWDRS 121

Query: 365  SRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQRSFDA 544
            SRTDKGVHSLATMISLK+EIP  AW  DPNG ALA+Y+N +LP NI+VFSILPSQRSFDA
Sbjct: 122  SRTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILPSQRSFDA 181

Query: 545  RRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVRAKYRK 724
            RREC +R+YSYLLPAEIIG+K N +A E+D+H+++FNDILNTFEGEHPF NYT+R+KYRK
Sbjct: 182  RRECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYTIRSKYRK 241

Query: 725  Q--PRVSSGNGSVSKRVMSSIVQS-VSESEGSDAEDIHESNESLAIGTGENXXXXXXXXX 895
            Q   + S GNG V +R  SS++ S   E E  ++ +     E   +G+  N         
Sbjct: 242  QFPAKQSPGNGGVFRRAKSSVISSDYDEGENQNSSESTSFVEH-PVGSSNN--------- 291

Query: 896  XAEVFDAHEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKLEQLSGVNYV 1075
                   +E  LKE++  + V ARWLH PDE+D++SASHFRKIF C CGKLE+  G++YV
Sbjct: 292  -------NEKGLKEQSPKLVVRARWLHGPDERDRISASHFRKIFNCSCGKLEKFLGLDYV 344

Query: 1076 EISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPSEVLILRGNN 1255
            E+SICGESFMLHQIRKMVGTAIA+KR LLPRDIL LSL+KFSRIV+PLAPSEVLILRGN+
Sbjct: 345  ELSICGESFMLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLILRGNS 404

Query: 1256 FVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPWKDWVEILDA 1435
            F +RK+PGN+ RPEMLTL+ESEEILK VD+FY SV+LPQ+S FLDP + PW DW+E L  
Sbjct: 405  FSVRKKPGNVKRPEMLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLENLTL 464

Query: 1436 NTSIPESQLNEVRIAWKLWKEEFDSRKK 1519
             +SIPE++L++VR AWKLWKE F SR K
Sbjct: 465  -SSIPEAELDDVRTAWKLWKENFRSRTK 491


>ref|XP_009789296.1| PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Nicotiana
            sylvestris]
 ref|XP_009789297.1| PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Nicotiana
            sylvestris]
 ref|XP_016490681.1| PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Nicotiana
            tabacum]
 ref|XP_016490682.1| PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Nicotiana
            tabacum]
 ref|XP_016490683.1| PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Nicotiana
            tabacum]
          Length = 531

 Score =  628 bits (1620), Expect = 0.0
 Identities = 328/528 (62%), Positives = 391/528 (74%), Gaps = 23/528 (4%)
 Frame = +2

Query: 5    LRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSP-------YAAATT*VSPSET- 160
            LR+P+ P       TN RF +    KPL V+   FSTSP       Y      +SP    
Sbjct: 6    LRLPLIP------LTNLRFSSYTT-KPLTVLC-SFSTSPSVIPSEPYTTTAEDLSPPPPQ 57

Query: 161  -----------ALKWEPFRKKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKA 307
                       + KWEPF KKKVVMRVGYVGSDYRGLQ+QRDEH LSTIEGELEKAIFKA
Sbjct: 58   STSPSTIFPARSNKWEPFIKKKVVMRVGYVGSDYRGLQMQRDEHELSTIEGELEKAIFKA 117

Query: 308  GGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSY 487
            GGIRDSN+G+L+KIGWARSSRTDKGVHSL+TMISLK+EIPE AW +DPNG +LA+ +NSY
Sbjct: 118  GGIRDSNFGNLYKIGWARSSRTDKGVHSLSTMISLKMEIPEDAWQDDPNGISLANCVNSY 177

Query: 488  LPENIRVFSILPSQRSFDARRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILN 667
            LPENIRVFSILPS++ FDARREC+ RKYSYLLPAEIIG+K   T+ E+D HLS FNDILN
Sbjct: 178  LPENIRVFSILPSKKRFDARRECNARKYSYLLPAEIIGIKNGSTSSEIDYHLSSFNDILN 237

Query: 668  TFEGEHPFHNYTVRAKYRKQ--PRVSSGNGSVSKRVMSSIVQSVSESEGSDAEDIHESNE 841
            +FEGEHPFHNYT+R+KYRK    R       + K+   S  + +S  E SD E+  +   
Sbjct: 238  SFEGEHPFHNYTIRSKYRKHSPARKLLQYDCLLKKGRPSTEEEISWCEESDGEENCKEKG 297

Query: 842  SLAIGTGENXXXXXXXXXXAEVFDAHE--DNLKEENRTIPVLARWLHEPDEKDKLSASHF 1015
             +     EN           +  + +E   + KE    +P+LARWLHE D +DKLS++HF
Sbjct: 298  VVTTVEDENQNPVCNLSTRNQAGNYNEKLSHSKELYSALPILARWLHETDARDKLSSAHF 357

Query: 1016 RKIFQCCCGKLEQLSGVNYVEISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSK 1195
            R+IF C CGKLE+L  +NYVE+SICGESFMLHQIRKMVGTA+AIKRNLLP D+L++SL K
Sbjct: 358  RRIFHCHCGKLEKLLSMNYVEVSICGESFMLHQIRKMVGTAVAIKRNLLPPDVLRMSLCK 417

Query: 1196 FSRIVVPLAPSEVLILRGNNFVIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQL 1375
            FSRIV+PLAPSEVL+L+GNNF +R +PGNI RPEMLTL+ESE+I+K VD+FYYS ML QL
Sbjct: 418  FSRIVLPLAPSEVLVLKGNNFALRNQPGNITRPEMLTLLESEDIIKAVDEFYYSTMLTQL 477

Query: 1376 STFLDPLRPPWKDWVEILDANTSIPESQLNEVRIAWKLWKEEFDSRKK 1519
            S FLDP + PW DWVEILDANT IPESQL EVRI+WKLWKE+++SR K
Sbjct: 478  SKFLDPAKYPWSDWVEILDANTRIPESQLEEVRISWKLWKEQYESRTK 525


>ref|XP_015088255.1| PREDICTED: putative tRNA pseudouridine synthase isoform X2 [Solanum
            pennellii]
          Length = 496

 Score =  625 bits (1611), Expect = 0.0
 Identities = 316/493 (64%), Positives = 376/493 (76%), Gaps = 2/493 (0%)
 Frame = +2

Query: 47   TNRRFKNLNNYKPLKVIILRFSTSPYAAATT*VSPSETALKWEPFRKKKVVMRVGYVGSD 226
            TN RF      K    I+L  STS           S  + KWEPF KKKVVMRVGYVGSD
Sbjct: 14   TNLRFSRSRTLK----IVLCSSTS-----------SVESNKWEPFIKKKVVMRVGYVGSD 58

Query: 227  YRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMI 406
            YRGLQ+QRDEH LSTIEGELEKAIFKAGGIR+SN+G+L+KIGWARSSRTDKGVHSLATMI
Sbjct: 59   YRGLQMQRDEHQLSTIEGELEKAIFKAGGIRESNFGNLYKIGWARSSRTDKGVHSLATMI 118

Query: 407  SLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQRSFDARRECSIRKYSYLLP 586
            SLK+EIP  AW++DPNG  LA+ +NS LPENIRVFSILPS++ FDARREC+ RKYSYL+P
Sbjct: 119  SLKMEIPADAWEDDPNGITLANCLNSSLPENIRVFSILPSKKRFDARRECNARKYSYLIP 178

Query: 587  AEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVRAKYRKQPRVSS--GNGSVS 760
            AEIIG+K +  + E++ H++ FNDILN+FEGEHPFHNYT+R+KYRKQ    +   N S+ 
Sbjct: 179  AEIIGIKNDSASSEIEYHIAKFNDILNSFEGEHPFHNYTIRSKYRKQSPARNLLKNDSLL 238

Query: 761  KRVMSSIVQSVSESEGSDAEDIHESNESLAIGTGENXXXXXXXXXXAEVFDAHEDNLKEE 940
            K+   S  + +S SE  D E   +    + I   EN                   + K+ 
Sbjct: 239  KKGRPSSEEEISGSEEIDGEQNRKEQRVVTIVEAENQNAEGNCNLKVS-------HSKDL 291

Query: 941  NRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKLEQLSGVNYVEISICGESFMLHQIR 1120
            N  IP+ ARWLHEPD +DKLS++HFR+IF C CGKLE+L G+NYVE+SICGESFMLHQIR
Sbjct: 292  NSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNYVEVSICGESFMLHQIR 351

Query: 1121 KMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPSEVLILRGNNFVIRKRPGNIIRPEM 1300
            KMVGTA+AIKRNLLP D L++SL KFSRIV+PLAPSEVL+L+GNNF +R  PGNIIRPEM
Sbjct: 352  KMVGTAVAIKRNLLPHDSLRMSLCKFSRIVLPLAPSEVLVLKGNNFALRNHPGNIIRPEM 411

Query: 1301 LTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPWKDWVEILDANTSIPESQLNEVRIA 1480
            LTL+ES++ILK VDDFYYS +LPQLS FLDP + PW +WVEILDANTSIP+ QL EVR+A
Sbjct: 412  LTLLESDDILKAVDDFYYSTLLPQLSRFLDPSKSPWSEWVEILDANTSIPDYQLEEVRVA 471

Query: 1481 WKLWKEEFDSRKK 1519
            WKLWK ++DSR K
Sbjct: 472  WKLWKAQYDSRTK 484


>ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synthase isoform X2 [Solanum
            lycopersicum]
          Length = 496

 Score =  625 bits (1611), Expect = 0.0
 Identities = 316/493 (64%), Positives = 377/493 (76%), Gaps = 2/493 (0%)
 Frame = +2

Query: 47   TNRRFKNLNNYKPLKVIILRFSTSPYAAATT*VSPSETALKWEPFRKKKVVMRVGYVGSD 226
            TN RF      K    I+L  STS           S  + KWEPF KKKVVMRVGYVGSD
Sbjct: 14   TNLRFLRSRTLK----IVLCSSTS-----------SVESNKWEPFIKKKVVMRVGYVGSD 58

Query: 227  YRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMI 406
            YRGLQ+QRDEH LSTIEGELEKAIFKAGGIR+SN+G+L+KIGWARSSRTDKGVHSLATMI
Sbjct: 59   YRGLQMQRDEHQLSTIEGELEKAIFKAGGIRESNFGNLYKIGWARSSRTDKGVHSLATMI 118

Query: 407  SLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQRSFDARRECSIRKYSYLLP 586
            SLK+EIP  AW++DPNG  LA+ +NS LPENIRVFSILPS++ FDARREC+ RKYSYL+P
Sbjct: 119  SLKMEIPADAWEDDPNGITLANCVNSSLPENIRVFSILPSKKRFDARRECNARKYSYLIP 178

Query: 587  AEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVRAKYRKQPRVSS--GNGSVS 760
            AEIIG+K +  + E++ H+++FNDILN+FEGEHPFHNYT+R+KYRKQ    +   N S+ 
Sbjct: 179  AEIIGIKNDSASSEIEYHIANFNDILNSFEGEHPFHNYTIRSKYRKQSPARNLLKNDSLL 238

Query: 761  KRVMSSIVQSVSESEGSDAEDIHESNESLAIGTGENXXXXXXXXXXAEVFDAHEDNLKEE 940
            K+   S  + +S SE  D E   +    + I   EN                   + K+ 
Sbjct: 239  KKGRPSSEEEISGSEEIDGEQNRKEQGVVTIVEAENQNAEGNCNLKVS-------HSKDL 291

Query: 941  NRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKLEQLSGVNYVEISICGESFMLHQIR 1120
            N  IP+ ARWLHEPD +DKLS++HFR+IF C CGKLE+L G+NYVE+SICGESFMLHQIR
Sbjct: 292  NSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNYVEVSICGESFMLHQIR 351

Query: 1121 KMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPSEVLILRGNNFVIRKRPGNIIRPEM 1300
            KMVGTA+AIKRNLLP D L++SL KFSRIV+PLAPSEVL+L+GNNF +R  PGNIIRPEM
Sbjct: 352  KMVGTAVAIKRNLLPHDTLRMSLCKFSRIVLPLAPSEVLVLKGNNFALRNHPGNIIRPEM 411

Query: 1301 LTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPWKDWVEILDANTSIPESQLNEVRIA 1480
            LTL+ES++ILK VDDFYYS +LPQLS FLDP + PW +WVEILDANTSIP+ QL EVR+A
Sbjct: 412  LTLLESDDILKAVDDFYYSTLLPQLSRFLDPSKSPWSEWVEILDANTSIPDYQLEEVRVA 471

Query: 1481 WKLWKEEFDSRKK 1519
            WKLWK ++DSR K
Sbjct: 472  WKLWKAQYDSRTK 484


>ref|XP_019071271.1| PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Solanum
            lycopersicum]
          Length = 503

 Score =  625 bits (1611), Expect = 0.0
 Identities = 316/493 (64%), Positives = 377/493 (76%), Gaps = 2/493 (0%)
 Frame = +2

Query: 47   TNRRFKNLNNYKPLKVIILRFSTSPYAAATT*VSPSETALKWEPFRKKKVVMRVGYVGSD 226
            TN RF      K    I+L  STS           S  + KWEPF KKKVVMRVGYVGSD
Sbjct: 14   TNLRFLRSRTLK----IVLCSSTS-----------SVESNKWEPFIKKKVVMRVGYVGSD 58

Query: 227  YRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMI 406
            YRGLQ+QRDEH LSTIEGELEKAIFKAGGIR+SN+G+L+KIGWARSSRTDKGVHSLATMI
Sbjct: 59   YRGLQMQRDEHQLSTIEGELEKAIFKAGGIRESNFGNLYKIGWARSSRTDKGVHSLATMI 118

Query: 407  SLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQRSFDARRECSIRKYSYLLP 586
            SLK+EIP  AW++DPNG  LA+ +NS LPENIRVFSILPS++ FDARREC+ RKYSYL+P
Sbjct: 119  SLKMEIPADAWEDDPNGITLANCVNSSLPENIRVFSILPSKKRFDARRECNARKYSYLIP 178

Query: 587  AEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVRAKYRKQPRVSS--GNGSVS 760
            AEIIG+K +  + E++ H+++FNDILN+FEGEHPFHNYT+R+KYRKQ    +   N S+ 
Sbjct: 179  AEIIGIKNDSASSEIEYHIANFNDILNSFEGEHPFHNYTIRSKYRKQSPARNLLKNDSLL 238

Query: 761  KRVMSSIVQSVSESEGSDAEDIHESNESLAIGTGENXXXXXXXXXXAEVFDAHEDNLKEE 940
            K+   S  + +S SE  D E   +    + I   EN                   + K+ 
Sbjct: 239  KKGRPSSEEEISGSEEIDGEQNRKEQGVVTIVEAENQNAEGNCNLKVS-------HSKDL 291

Query: 941  NRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKLEQLSGVNYVEISICGESFMLHQIR 1120
            N  IP+ ARWLHEPD +DKLS++HFR+IF C CGKLE+L G+NYVE+SICGESFMLHQIR
Sbjct: 292  NSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNYVEVSICGESFMLHQIR 351

Query: 1121 KMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPSEVLILRGNNFVIRKRPGNIIRPEM 1300
            KMVGTA+AIKRNLLP D L++SL KFSRIV+PLAPSEVL+L+GNNF +R  PGNIIRPEM
Sbjct: 352  KMVGTAVAIKRNLLPHDTLRMSLCKFSRIVLPLAPSEVLVLKGNNFALRNHPGNIIRPEM 411

Query: 1301 LTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPWKDWVEILDANTSIPESQLNEVRIA 1480
            LTL+ES++ILK VDDFYYS +LPQLS FLDP + PW +WVEILDANTSIP+ QL EVR+A
Sbjct: 412  LTLLESDDILKAVDDFYYSTLLPQLSRFLDPSKSPWSEWVEILDANTSIPDYQLEEVRVA 471

Query: 1481 WKLWKEEFDSRKK 1519
            WKLWK ++DSR K
Sbjct: 472  WKLWKAQYDSRTK 484


>ref|XP_015088254.1| PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Solanum
            pennellii]
          Length = 503

 Score =  625 bits (1611), Expect = 0.0
 Identities = 316/493 (64%), Positives = 376/493 (76%), Gaps = 2/493 (0%)
 Frame = +2

Query: 47   TNRRFKNLNNYKPLKVIILRFSTSPYAAATT*VSPSETALKWEPFRKKKVVMRVGYVGSD 226
            TN RF      K    I+L  STS           S  + KWEPF KKKVVMRVGYVGSD
Sbjct: 14   TNLRFSRSRTLK----IVLCSSTS-----------SVESNKWEPFIKKKVVMRVGYVGSD 58

Query: 227  YRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMI 406
            YRGLQ+QRDEH LSTIEGELEKAIFKAGGIR+SN+G+L+KIGWARSSRTDKGVHSLATMI
Sbjct: 59   YRGLQMQRDEHQLSTIEGELEKAIFKAGGIRESNFGNLYKIGWARSSRTDKGVHSLATMI 118

Query: 407  SLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQRSFDARRECSIRKYSYLLP 586
            SLK+EIP  AW++DPNG  LA+ +NS LPENIRVFSILPS++ FDARREC+ RKYSYL+P
Sbjct: 119  SLKMEIPADAWEDDPNGITLANCLNSSLPENIRVFSILPSKKRFDARRECNARKYSYLIP 178

Query: 587  AEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVRAKYRKQPRVSS--GNGSVS 760
            AEIIG+K +  + E++ H++ FNDILN+FEGEHPFHNYT+R+KYRKQ    +   N S+ 
Sbjct: 179  AEIIGIKNDSASSEIEYHIAKFNDILNSFEGEHPFHNYTIRSKYRKQSPARNLLKNDSLL 238

Query: 761  KRVMSSIVQSVSESEGSDAEDIHESNESLAIGTGENXXXXXXXXXXAEVFDAHEDNLKEE 940
            K+   S  + +S SE  D E   +    + I   EN                   + K+ 
Sbjct: 239  KKGRPSSEEEISGSEEIDGEQNRKEQRVVTIVEAENQNAEGNCNLKVS-------HSKDL 291

Query: 941  NRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKLEQLSGVNYVEISICGESFMLHQIR 1120
            N  IP+ ARWLHEPD +DKLS++HFR+IF C CGKLE+L G+NYVE+SICGESFMLHQIR
Sbjct: 292  NSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNYVEVSICGESFMLHQIR 351

Query: 1121 KMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPSEVLILRGNNFVIRKRPGNIIRPEM 1300
            KMVGTA+AIKRNLLP D L++SL KFSRIV+PLAPSEVL+L+GNNF +R  PGNIIRPEM
Sbjct: 352  KMVGTAVAIKRNLLPHDSLRMSLCKFSRIVLPLAPSEVLVLKGNNFALRNHPGNIIRPEM 411

Query: 1301 LTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPWKDWVEILDANTSIPESQLNEVRIA 1480
            LTL+ES++ILK VDDFYYS +LPQLS FLDP + PW +WVEILDANTSIP+ QL EVR+A
Sbjct: 412  LTLLESDDILKAVDDFYYSTLLPQLSRFLDPSKSPWSEWVEILDANTSIPDYQLEEVRVA 471

Query: 1481 WKLWKEEFDSRKK 1519
            WKLWK ++DSR K
Sbjct: 472  WKLWKAQYDSRTK 484


>ref|XP_021277897.1| putative tRNA pseudouridine synthase isoform X1 [Herrania umbratica]
          Length = 507

 Score =  625 bits (1611), Expect = 0.0
 Identities = 316/501 (63%), Positives = 379/501 (75%), Gaps = 2/501 (0%)
 Frame = +2

Query: 5    LRIPVSPWWLTPLTTNRRFKNLNNYKPLKVIILRFSTSPYAAATT*VSPSETALKWEPFR 184
            LR+P++PW +             N  PLK    R       +++T       A KWEPFR
Sbjct: 6    LRVPLAPWLM----------KTRNPPPLKQPCPRIQLRFLCSSSTAQPLPPAAPKWEPFR 55

Query: 185  KKKVVMRVGYVGSDYRGLQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKIGWARS 364
            KKKVVMRVGYVG++YRGLQ+QRDEH LSTIE ELE AIFKAGGIRDSNYGDLHKI WARS
Sbjct: 56   KKKVVMRVGYVGTNYRGLQVQRDEHELSTIENELETAIFKAGGIRDSNYGDLHKIAWARS 115

Query: 365  SRTDKGVHSLATMISLKLEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQRSFDA 544
            SRTDKGVHSLATMI+LK+EIPE AW  DPNG ALA  +NSYLP++I+VFSILPSQRSFD 
Sbjct: 116  SRTDKGVHSLATMITLKMEIPEDAWKADPNGIALAKCVNSYLPDSIKVFSILPSQRSFDP 175

Query: 545  RRECSIRKYSYLLPAEIIGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVRAKYRK 724
            RREC++RKYSYLLPAEIIG+K +F+  E+++H+SDFN ILN FEGEHPFHNYT RAKYR+
Sbjct: 176  RRECNLRKYSYLLPAEIIGIKRHFSEAEINHHISDFNSILNCFEGEHPFHNYTQRAKYRR 235

Query: 725  Q--PRVSSGNGSVSKRVMSSIVQSVSESEGSDAEDIHESNESLAIGTGENXXXXXXXXXX 898
            Q  PR ++ NG V K   +    S SE E SD E+     E+  + + E           
Sbjct: 236  QIPPRQTARNGRVPKGAKAHDESSTSELEESDVEEDPRIEETTTLNSEEK--STGFDEPL 293

Query: 899  AEVFDAHEDNLKEENRTIPVLARWLHEPDEKDKLSASHFRKIFQCCCGKLEQLSGVNYVE 1078
             +  D   ++LK ++  + V ARWL+EPDE D+++ASHFRKIF C CG+LE   G + +E
Sbjct: 294  VDCCDGQGNSLKNQSSNVVVRARWLYEPDETDRITASHFRKIFLCSCGRLENSMGFDNIE 353

Query: 1079 ISICGESFMLHQIRKMVGTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPSEVLILRGNNF 1258
            ISI GESFMLHQIRKMVGTA+A+KRNL PRDIL LSL+KFSRIV+PLAPSEVLILRGN F
Sbjct: 354  ISIWGESFMLHQIRKMVGTAVAVKRNLFPRDILTLSLTKFSRIVLPLAPSEVLILRGNTF 413

Query: 1259 VIRKRPGNIIRPEMLTLVESEEILKLVDDFYYSVMLPQLSTFLDPLRPPWKDWVEILDAN 1438
            ++RK PGNI RPEMLT+VESEEILK VD FY SV+LPQ+S FLDP + PWK+WVE LDAN
Sbjct: 414  ILRKMPGNITRPEMLTMVESEEILKEVDKFYRSVLLPQVSKFLDPSKSPWKEWVENLDAN 473

Query: 1439 TSIPESQLNEVRIAWKLWKEE 1501
            TS+P+++L+EVR AWKLWKE+
Sbjct: 474  TSVPDAELDEVRTAWKLWKEK 494


>ref|XP_016542097.1| PREDICTED: putative tRNA pseudouridine synthase [Capsicum annuum]
          Length = 502

 Score =  624 bits (1609), Expect = 0.0
 Identities = 313/490 (63%), Positives = 378/490 (77%), Gaps = 6/490 (1%)
 Frame = +2

Query: 68   LNNYKPLKVIILRFSTSPYAAATT*VSPSETAL----KWEPFRKKKVVMRVGYVGSDYRG 235
            L   +PLK++    S++     +  +  S T      KW+PF KKKVVMRVGYVGSDYRG
Sbjct: 8    LPQIRPLKILRCFSSSASVEDLSPALESSPTLFLENNKWKPFIKKKVVMRVGYVGSDYRG 67

Query: 236  LQIQRDEHALSTIEGELEKAIFKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATMISLK 415
            LQ+QRDEH LSTIEGELEK+IFKAGGIRDSN+G+ +KIGWARSSRTDKGVHSLATMISLK
Sbjct: 68   LQMQRDEHELSTIEGELEKSIFKAGGIRDSNFGNFYKIGWARSSRTDKGVHSLATMISLK 127

Query: 416  LEIPEFAWDNDPNGFALASYINSYLPENIRVFSILPSQRSFDARRECSIRKYSYLLPAEI 595
            +EIPE AW++DPNG  LA+ +NS LPENI+VF ILPS++ FDARREC+ RKYSYL+PAEI
Sbjct: 128  MEIPEDAWEDDPNGITLANCVNSSLPENIKVFGILPSKKRFDARRECNARKYSYLIPAEI 187

Query: 596  IGVKENFTAGEVDNHLSDFNDILNTFEGEHPFHNYTVRAKYRKQP--RVSSGNGSVSKRV 769
            IG+K + T+ E+D HL++F+ IL TFEGEHPFHNYT+R+KYRK    R S    S+ ++ 
Sbjct: 188  IGIKNDSTSSEIDYHLANFDHILKTFEGEHPFHNYTIRSKYRKSSPARNSLKKDSLLRKG 247

Query: 770  MSSIVQSVSESEGSDAEDIHESNESLAIGTGENXXXXXXXXXXAEVFDAHEDNLKEENRT 949
                 + +S  E SD E+I +    + I   EN          A        + K+ N  
Sbjct: 248  RPFSEKEISGCEESDGEEICKEKGVVTIAEAENQNSAGNCNEKA-------GHTKDLNSV 300

Query: 950  IPVLARWLHEPDEKDKLSASHFRKIFQCCCGKLEQLSGVNYVEISICGESFMLHQIRKMV 1129
            +P+ ARWL+EPD KDKLS++HFRKIF C CGKLE+L G+NYVE+SICGESFMLHQIRKM+
Sbjct: 301  LPIQARWLNEPDAKDKLSSAHFRKIFHCHCGKLEKLFGMNYVEVSICGESFMLHQIRKMI 360

Query: 1130 GTAIAIKRNLLPRDILKLSLSKFSRIVVPLAPSEVLILRGNNFVIRKRPGNIIRPEMLTL 1309
            GTA+AIKRNLLP DIL++SL KFSRIV+PLAPSEVLIL+GNNF +R  PGNIIRPEMLTL
Sbjct: 361  GTAVAIKRNLLPPDILRMSLCKFSRIVLPLAPSEVLILKGNNFALRNHPGNIIRPEMLTL 420

Query: 1310 VESEEILKLVDDFYYSVMLPQLSTFLDPLRPPWKDWVEILDANTSIPESQLNEVRIAWKL 1489
            +ES++I+K VDDFYYS MLPQLS FLDP + PW DWVEILDANTSIPE QL EVR+AWKL
Sbjct: 421  LESDDIIKAVDDFYYSTMLPQLSKFLDPSKSPWSDWVEILDANTSIPEYQLEEVRVAWKL 480

Query: 1490 WKEEFDSRKK 1519
            WK ++DSR K
Sbjct: 481  WKAQYDSRAK 490