BLASTX nr result

ID: Rehmannia31_contig00022187 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00022187
         (460 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN12081.1| Transcription factor CA150 [Handroanthus impetigi...    84   1e-15
ref|XP_012842923.1| PREDICTED: pre-mRNA-processing protein 40C [...    76   4e-13

>gb|PIN12081.1| Transcription factor CA150 [Handroanthus impetiginosus]
          Length = 1001

 Score = 83.6 bits (205), Expect = 1e-15
 Identities = 58/139 (41%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
 Frame = +2

Query: 74  ESFSVLPLANQCNLFFSGSL------LKVIEQGLSAVGKSAPFPAKSMQXXXXXXXXXXX 235
           +  S  P+    +L  SGSL      L  +EQG SAV KSA  P ++M            
Sbjct: 51  QQLSPNPVMQSESLGSSGSLPPMSSGLSTVEQGPSAVEKSASSPVQAM------------ 98

Query: 236 XXXXXXXXXXXXXXXXXXXXEGNYSFIGNVQPNQTDQSHRSNVRADGSQEMGAMTSAPAF 415
                                GNYSF GN++P QTDQS R++VRADG Q MGA+TSA +F
Sbjct: 99  -LPPASSLPSHPGPAVQAPHPGNYSFNGNMEPKQTDQSQRTHVRADGFQGMGAITSASSF 157

Query: 416 MQSAP----QPARPNSSPS 460
            QSAP    QP +PNSSPS
Sbjct: 158 TQSAPRPASQPGQPNSSPS 176


>ref|XP_012842923.1| PREDICTED: pre-mRNA-processing protein 40C [Erythranthe guttata]
 gb|EYU32634.1| hypothetical protein MIMGU_mgv1a001237mg [Erythranthe guttata]
          Length = 858

 Score = 76.3 bits (186), Expect = 4e-13
 Identities = 38/54 (70%), Positives = 45/54 (83%), Gaps = 1/54 (1%)
 Frame = +2

Query: 302 NYSFIGNVQPNQTDQSHRSNVRADGSQEMGAMTSAPAFMQ-SAPQPARPNSSPS 460
           N+SF GNVQ  Q DQ +R+NVR DG+QE GA+TS+PAFMQ S+ QPARPNSSPS
Sbjct: 25  NFSFNGNVQSAQADQPNRTNVRGDGTQETGAITSSPAFMQSSSSQPARPNSSPS 78


Top