BLASTX nr result

ID: Rehmannia31_contig00022111 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00022111
         (508 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022871882.1| collagen alpha-2(IV) chain-like [Olea europa...    58   2e-07

>ref|XP_022871882.1| collagen alpha-2(IV) chain-like [Olea europaea var. sylvestris]
          Length = 169

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 41/95 (43%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
 Frame = -1

Query: 394 IDQTYLEGGGE--SKLGMEGILGMEGIFGSPVGSEGIGGIENFGMPGIVGIVGNVXXXXX 221
           +   YLEGGG+    +GMEGILGMEG       +EGIGG E  GMPG+ GIVG V     
Sbjct: 82  LPMVYLEGGGDRTGMVGMEGILGMEG-------NEGIGGNETLGMPGMAGIVGCVGMVGM 134

Query: 220 XXXXXXXXXXXXGRPGI-------DCNR*RAPSHF 137
                       G  GI       DC+R RA  HF
Sbjct: 135 EGIGGKDGFGNDGIVGIPGRGGGKDCSRFRAAWHF 169


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